FFCP PHASE1:Mm9::chr1:34529559..34529602,+: Difference between revisions
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|id=chr1:34529559..34529602,+ | |id=chr1:34529559..34529602,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.83e-12!32;CL:0002032!3.83e-12!32;CL:0000037!3.83e-12!32;CL:0000566!3.83e-12!32;CL:0000837!3.83e-12!32;CL:0000738!6.69e-10!17;CL:0002087!6.69e-10!17;CL:0002031!3.06e-09!25;CL:0000838!2.15e-08!12;CL:0000084!7.32e-08!11;CL:0000827!7.32e-08!11;CL:0000542!8.95e-08!13;CL:0000051!8.95e-08!13;CL:0002320!6.19e-07!46;CL:0000134!6.19e-07!46;CL:0000791!6.80e-07!9;CL:0000789!6.80e-07!9;CL:0002420!6.80e-07!9;CL:0002419!6.80e-07!9;CL:0000790!6.80e-07!9 | |ontology_enrichment_celltype=CL:0000988!3.83e-12!32;CL:0002032!3.83e-12!32;CL:0000037!3.83e-12!32;CL:0000566!3.83e-12!32;CL:0000837!3.83e-12!32;CL:0000738!6.69e-10!17;CL:0002087!6.69e-10!17;CL:0002031!3.06e-09!25;CL:0000838!2.15e-08!12;CL:0000084!7.32e-08!11;CL:0000827!7.32e-08!11;CL:0000542!8.95e-08!13;CL:0000051!8.95e-08!13;CL:0002320!6.19e-07!46;CL:0000134!6.19e-07!46;CL:0000791!6.80e-07!9;CL:0000789!6.80e-07!9;CL:0002420!6.80e-07!9;CL:0002419!6.80e-07!9;CL:0000790!6.80e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.44e-12,32;CL:0002032,3.44e-12,32;CL:0000037,3.44e-12,32;CL:0000837,3.44e-12,32;CL:0000738,6.64e-10,17;CL:0002087,6.64e-10,17;CL:0002031,2.77e-09,25;CL:0000838,2.14e-08,12;CL:0000084,7.27e-08,11;CL:0000827,7.27e-08,11;CL:0000542,8.89e-08,13;CL:0000051,8.89e-08,13;CL:0002320,4.98e-07,46;CL:0000134,4.98e-07,46;CL:0000791,6.77e-07,9;CL:0000789,6.77e-07,9;CL:0002420,6.77e-07,9;CL:0002419,6.77e-07,9;CL:0000790,6.77e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.50e-19!48;UBERON:0002405!1.49e-18!70;UBERON:0002390!4.66e-18!45;UBERON:0003061!4.66e-18!45;UBERON:0003081!2.57e-13!88;UBERON:0000926!7.26e-13!193;UBERON:0004120!7.26e-13!193;UBERON:0006603!7.26e-13!193;UBERON:0002371!4.40e-10!16;UBERON:0001041!7.54e-10!92;UBERON:0000077!2.68e-09!97;UBERON:0004177!3.04e-09!29;UBERON:0005057!4.28e-09!51;UBERON:0001474!1.04e-08!22;UBERON:0004765!1.04e-08!22;UBERON:0001434!1.04e-08!22;UBERON:0003104!4.11e-08!131;UBERON:0009142!4.11e-08!131;UBERON:0001004!5.37e-08!42;UBERON:0000065!5.65e-08!41;UBERON:0001007!3.07e-07!128;UBERON:0001555!3.07e-07!128;UBERON:0007026!3.07e-07!128;UBERON:0002204!3.12e-07!32;UBERON:0004119!4.51e-07!130;UBERON:0000925!4.51e-07!130;UBERON:0006595!4.51e-07!130;UBERON:0002370!5.12e-07!23;UBERON:0000974!5.12e-07!23;UBERON:0004807!5.12e-07!23;UBERON:0005058!5.12e-07!23;UBERON:0003351!5.12e-07!23;UBERON:0009113!5.12e-07!23;UBERON:0003295!5.12e-07!23;UBERON:0009722!5.12e-07!23;UBERON:0005562!5.12e-07!23;UBERON:0007690!5.12e-07!23;UBERON:0003408!5.45e-07!24;UBERON:0002384!6.19e-07!46;UBERON:0004921!9.71e-07!126;UBERON:0004185!9.71e-07!126 | |ontology_enrichment_uberon=UBERON:0002193!2.50e-19!48;UBERON:0002405!1.49e-18!70;UBERON:0002390!4.66e-18!45;UBERON:0003061!4.66e-18!45;UBERON:0003081!2.57e-13!88;UBERON:0000926!7.26e-13!193;UBERON:0004120!7.26e-13!193;UBERON:0006603!7.26e-13!193;UBERON:0002371!4.40e-10!16;UBERON:0001041!7.54e-10!92;UBERON:0000077!2.68e-09!97;UBERON:0004177!3.04e-09!29;UBERON:0005057!4.28e-09!51;UBERON:0001474!1.04e-08!22;UBERON:0004765!1.04e-08!22;UBERON:0001434!1.04e-08!22;UBERON:0003104!4.11e-08!131;UBERON:0009142!4.11e-08!131;UBERON:0001004!5.37e-08!42;UBERON:0000065!5.65e-08!41;UBERON:0001007!3.07e-07!128;UBERON:0001555!3.07e-07!128;UBERON:0007026!3.07e-07!128;UBERON:0002204!3.12e-07!32;UBERON:0004119!4.51e-07!130;UBERON:0000925!4.51e-07!130;UBERON:0006595!4.51e-07!130;UBERON:0002370!5.12e-07!23;UBERON:0000974!5.12e-07!23;UBERON:0004807!5.12e-07!23;UBERON:0005058!5.12e-07!23;UBERON:0003351!5.12e-07!23;UBERON:0009113!5.12e-07!23;UBERON:0003295!5.12e-07!23;UBERON:0009722!5.12e-07!23;UBERON:0005562!5.12e-07!23;UBERON:0007690!5.12e-07!23;UBERON:0003408!5.45e-07!24;UBERON:0002384!6.19e-07!46;UBERON:0004921!9.71e-07!126;UBERON:0004185!9.71e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.83e-19,48;UBERON:0002405,1.83e-19,48;UBERON:0002390,3.42e-18,45;UBERON:0003061,3.42e-18,45;UBERON:0003081,5.83e-13,87;UBERON:0002371,4.37e-10,16;UBERON:0001041,1.12e-09,80;UBERON:0004177,2.35e-09,29;UBERON:0005057,2.35e-09,29;UBERON:0000926,2.88e-09,120;UBERON:0004120,2.88e-09,120;UBERON:0006603,2.88e-09,120;UBERON:0001474,1.11e-08,22;UBERON:0004765,1.11e-08,22;UBERON:0001434,1.11e-08,22;UBERON:0000077,3.39e-08,35;UBERON:0001004,4.40e-08,42;UBERON:0000065,4.63e-08,41;UBERON:0002204,3.28e-07,32;UBERON:0002370,4.03e-07,23;UBERON:0000974,4.03e-07,23;UBERON:0004807,4.03e-07,23;UBERON:0005058,4.03e-07,23;UBERON:0003351,4.03e-07,23;UBERON:0009113,4.03e-07,23;UBERON:0003295,4.03e-07,23;UBERON:0009722,4.03e-07,23;UBERON:0005562,4.03e-07,23;UBERON:0007690,4.03e-07,23;UBERON:0003408,4.31e-07,24;UBERON:0002384,4.98e-07,46;UBERON:0001007,8.05e-07,116;UBERON:0001555,8.05e-07,116;UBERON:0007026,8.05e-07,116 | |||
|phase1_expression=5.60520964866779,0.697950815278722,1.81999695755814,0,0,6.21153306073992,6.77476657727024,556.521524033194,349.71918582474,280.175238007426,150.671812038444,114.712364635294,509.493372275268,405.018724407215,76.6152452176024,77.5480274103033,39.8750270533044,294.799393527273,294.796032252338,301.7410424284,8.24919914465377,132.851292706785,175.787458090503,28.4786512572264,40.3760334678219,1.72269589234506,2.15380998079537,0.646413698057667,6.08074942260396,13.8616571367962,12.8603696180077,0,0.61506478758457,0,5.19932915552294,8.6442015586416,5.51257261908397,313.061659791207,416.451738631186,234.538637300262,405.8797267414,413.925563884818,355.879088771836,3.02152363141385,1.82478476195126,2.38610777810186,9.38869613217647,0.436050312760893,0.439372365468944,2.52758868796568,0.839918529752175,0,212.244996663036,591.170145739246,487.672102555715,6.43148590089868,13.4670716771216,9.7977697532714,1.82084814773638,2.64495489636016,6.97214543856797,1.0165335962074,1.77858959222228,593.033913688442,956.233772602264,714.742995635777,178.262065758451,123.718294313541,4.04389488003063,4.18518408828241,5.46844899513593,5.71301968807607,9.93908434282261,3.1847607795888,2.01275489138296,0.919218786610021,3.30347642998166,3.83062014255563,3.5329502648936,2.76961204233407,1.82975287204819,3.64639359389732,2.23346399201105,5.6276261003168,6.1119299110724,9.72274332063103,4.9830088279686,3.72798891650601,4.84647637332378,0.0755715601067855,20.5803786978191,22.371020801516,0,0,3.89865850468601,1.34408066129201,11.9377757111989,0,0.779358013808606,0,0.563373679106722,0,0,0,3.030874574157,3.29367825117628,1.01104889002957,15.9857431606684,110.566476317342,16.7739617143252,10.4091196059682,8.22056791442781,6.91846491768175,4.22023393547343,5.87943535678524,5.6549966098354,2.47194967734374,15.0383331196708,47.7689698052932,11.6472131962135,18.5506875506731,27.6378894287077,9.31958806090611,1.75668478206928,1.04723353406728,20.1811073614787,205.962199025677,404.93434342055,210.301225805922,2.24685959107234,5.94750783664214,1.63350657746724,2.78118912307642,3.83573185995496,2.90903262383384,1.94689515681309,12.6280811174392,33.3410681235049,10.867078612648,2.73574412652416,4.03373373184381,4.59804208866946,3.96136685571768,6.32960234910003,2.17716797284249,3.45907044769094,3.46696380870997,3.10444044886819,3.66465587985832,5.29497024469894,4.39877810409872,14.0285268753648,14.4584569597311,8.358051996532,9.67176041117334,6.17006227137329,315.293721103642,243.96581594475,192.094525591421,6.21377317606506,8.67746421930056,12.604344302271,9.46978942340841,14.3637889175605,9.10175966035532,9.06882384526591,8.85302224618743,7.70651259623319,4.11399624783701,10.1783827729039,9.72825714550269,12.8655988934292,18.0031094538662,13.5548482947975,2.73376933133365,4.32199371992995,13.2167513193519,4.23120906661671,8.31824177087412,7.19933682767359,6.70110798874885,7.26060688644033,8.00560957841533,7.22857379227725,9.49058123089023,8.56434564564857,13.069430857614,12.3353012665514,16.3769833180061,11.6846523125049,8.21324589523838,8.36393347668342,11.3800740571849,9.48262654660749,6.76246414038483,10.386217720111,9.50367187121366,5.6810014111158,4.61626721007078,3.39503340353085,2.82597710114475,3.20832626196681,10.6722945751374,11.8460025058427,17.6903095601883,13.9414509678609,21.0974526244043,18.5706413009361,24.6987076227977,24.1664755458681,31.940639674682,25.2596500133035,17.2521847832825,34.2369671855023,19.6583734062173,11.36604950762,6.99649912735457,10.1313139486307,44.7102720203183,21.0335467065238,16.1335326677606,26.3104882951542,25.3465468151582,16.0806007144143,15.9489239393629,10.9274842800367,25.2216230569906,25.6899039992579,18.1778436269535,29.9869865929801,28.4930220078728,26.0368305446721,202.060320478625,367.680242261448,19.1788066477424,16.0043312856745,3.69266356971921,1.75817529888305,0,9.08895337935743,1.89304931649754,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,1.75353514746787,0,1.92792789853084,12.3487874131194,13.5329858787114,11.0763132360432,15.3422214364458,7.96470830039777,12.624593080059,9.97667737983678,6.41257271170054,13.5838870725155,9.83792473420568,10.5955600198971,18.9037539328303,8.55593708123331,12.3254335594968,9.48767477174989,12.3762651897824,3.06395645178409,6.84232157318979,11.3835641728824,12.2172109968008,7.27094957933322,12.8425548673491,11.3538824215463,8.22055362609418,11.9682571112492,3.38931313382112,3.96951116498931,8.73897140589844,11.3025098687134,7.47880269109133,7.87857470420701,5.74493149107714,10.2018292820448,2.41052892613663,95.8585641275954,46.0242715557986,38.8908507476395,48.787430364215,41.6917394549127,56.9657651284241,312.5903327587,305.793923327193,306.251141950603,8.59203556213602,5.06137589729817,8.53941761932765,10.5845234005365,9.40897332065109,9.82631536857799,7.68726774393478,9.91841468704031,7.85267825952089,8.94343315713371,11.1841076355647,2.25477175473676,4.48549638131936,4.3019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| ||
|short_description=p1@Ptpn18 | |short_description=p1@Ptpn18 | ||
}} | }} |
Revision as of 23:46, 14 November 2012
Short description: | p1@Ptpn18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptpn18_5end |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | 0bp_to_uc007aot.1_5end |
EntrezGene: | Ptpn18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.44e-12 | 32 |
hematopoietic oligopotent progenitor cell | 3.44e-12 | 32 |
hematopoietic stem cell | 3.44e-12 | 32 |
hematopoietic multipotent progenitor cell | 3.44e-12 | 32 |
leukocyte | 6.64e-10 | 17 |
nongranular leukocyte | 6.64e-10 | 17 |
hematopoietic lineage restricted progenitor cell | 2.77e-09 | 25 |
lymphoid lineage restricted progenitor cell | 2.14e-08 | 12 |
T cell | 7.27e-08 | 11 |
pro-T cell | 7.27e-08 | 11 |
lymphocyte | 8.89e-08 | 13 |
common lymphoid progenitor | 8.89e-08 | 13 |
connective tissue cell | 4.98e-07 | 46 |
mesenchymal cell | 4.98e-07 | 46 |
mature alpha-beta T cell | 6.77e-07 | 9 |
alpha-beta T cell | 6.77e-07 | 9 |
immature T cell | 6.77e-07 | 9 |
mature T cell | 6.77e-07 | 9 |
immature alpha-beta T cell | 6.77e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.83e-19 | 48 |
immune system | 1.83e-19 | 48 |
hematopoietic system | 3.42e-18 | 45 |
blood island | 3.42e-18 | 45 |
lateral plate mesoderm | 5.83e-13 | 87 |
bone marrow | 4.37e-10 | 16 |
foregut | 1.12e-09 | 80 |
hemopoietic organ | 2.35e-09 | 29 |
immune organ | 2.35e-09 | 29 |
mesoderm | 2.88e-09 | 120 |
mesoderm-derived structure | 2.88e-09 | 120 |
presumptive mesoderm | 2.88e-09 | 120 |
bone element | 1.11e-08 | 22 |
skeletal element | 1.11e-08 | 22 |
skeletal system | 1.11e-08 | 22 |
mixed endoderm/mesoderm-derived structure | 3.39e-08 | 35 |
respiratory system | 4.40e-08 | 42 |
respiratory tract | 4.63e-08 | 41 |
musculoskeletal system | 3.28e-07 | 32 |
thymus | 4.03e-07 | 23 |
neck | 4.03e-07 | 23 |
respiratory system epithelium | 4.03e-07 | 23 |
hemolymphoid system gland | 4.03e-07 | 23 |
pharyngeal epithelium | 4.03e-07 | 23 |
thymic region | 4.03e-07 | 23 |
pharyngeal gland | 4.03e-07 | 23 |
entire pharyngeal arch endoderm | 4.03e-07 | 23 |
thymus primordium | 4.03e-07 | 23 |
early pharyngeal endoderm | 4.03e-07 | 23 |
gland of gut | 4.31e-07 | 24 |
connective tissue | 4.98e-07 | 46 |
digestive system | 8.05e-07 | 116 |
digestive tract | 8.05e-07 | 116 |
primitive gut | 8.05e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.