FFCP PHASE1:Mm9::chr13:95645555..95645566,+: Difference between revisions
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|id=chr13:95645555..95645566,+ | |id=chr13:95645555..95645566,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.02e-17!23;CL:0000337!2.02e-17!23;CL:0000540!6.96e-11!33;CL:0000047!6.96e-11!33;CL:0000031!6.96e-11!33;CL:0000404!6.96e-11!33;CL:0000393!1.34e-08!39;CL:0000211!1.34e-08!39;CL:0002319!1.92e-07!43;CL:0002613!2.67e-07!3;CL:0000221!3.45e-07!44;CL:0000133!3.45e-07!44;CL:0002612!4.01e-07!3;CL:0002614!6.85e-07!3 | |ontology_enrichment_celltype=CL:0000117!2.02e-17!23;CL:0000337!2.02e-17!23;CL:0000540!6.96e-11!33;CL:0000047!6.96e-11!33;CL:0000031!6.96e-11!33;CL:0000404!6.96e-11!33;CL:0000393!1.34e-08!39;CL:0000211!1.34e-08!39;CL:0002319!1.92e-07!43;CL:0002613!2.67e-07!3;CL:0000221!3.45e-07!44;CL:0000133!3.45e-07!44;CL:0002612!4.01e-07!3;CL:0002614!6.85e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.46e-40,23;CL:0000337,5.46e-40,23;CL:0000540,3.85e-27,33;CL:0000047,3.85e-27,33;CL:0000031,3.85e-27,33;CL:0000404,3.85e-27,33;CL:0000393,1.38e-22,39;CL:0000211,1.38e-22,39;CL:0002319,2.97e-20,43;CL:0000221,9.77e-20,44;CL:0000133,9.77e-20,44;CL:0002613,2.98e-14,3;CL:0002612,7.30e-14,3;CL:0002614,2.37e-13,3;CL:0002321,1.85e-11,70;CL:0002611,2.00e-09,2;CL:0000723,3.27e-08,91;CL:0000048,3.27e-08,91;CL:0000034,1.53e-07,97;CL:0000120,4.88e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!2.54e-12!6;UBERON:0005174!2.54e-12!6;UBERON:0001137!2.54e-12!6;UBERON:0002420!7.98e-12!8;UBERON:0007245!7.98e-12!8;UBERON:0010009!7.98e-12!8;UBERON:0010011!7.98e-12!8;UBERON:0000454!7.98e-12!8;UBERON:0002298!1.37e-11!6;UBERON:0001948!1.22e-10!5;UBERON:0002315!1.22e-10!5;UBERON:0003076!8.12e-10!12;UBERON:0003057!8.12e-10!12;UBERON:0001049!3.71e-09!52;UBERON:0005068!3.71e-09!52;UBERON:0006241!3.71e-09!52;UBERON:0007135!3.71e-09!52;UBERON:0001017!8.77e-09!73;UBERON:0005743!8.77e-09!73;UBERON:0000073!2.16e-08!75;UBERON:0001016!2.16e-08!75;UBERON:0002950!2.48e-08!4;UBERON:0001891!2.48e-08!4;UBERON:0009616!2.48e-08!4;UBERON:0002257!4.01e-07!3;UBERON:0002038!6.85e-07!3;UBERON:0002308!6.85e-07!3;UBERON:0009663!6.85e-07!3;UBERON:0009661!6.85e-07!3;UBERON:0006331!6.85e-07!3;UBERON:0000125!6.85e-07!3 | |ontology_enrichment_uberon=UBERON:0002240!2.54e-12!6;UBERON:0005174!2.54e-12!6;UBERON:0001137!2.54e-12!6;UBERON:0002420!7.98e-12!8;UBERON:0007245!7.98e-12!8;UBERON:0010009!7.98e-12!8;UBERON:0010011!7.98e-12!8;UBERON:0000454!7.98e-12!8;UBERON:0002298!1.37e-11!6;UBERON:0001948!1.22e-10!5;UBERON:0002315!1.22e-10!5;UBERON:0003076!8.12e-10!12;UBERON:0003057!8.12e-10!12;UBERON:0001049!3.71e-09!52;UBERON:0005068!3.71e-09!52;UBERON:0006241!3.71e-09!52;UBERON:0007135!3.71e-09!52;UBERON:0001017!8.77e-09!73;UBERON:0005743!8.77e-09!73;UBERON:0000073!2.16e-08!75;UBERON:0001016!2.16e-08!75;UBERON:0002950!2.48e-08!4;UBERON:0001891!2.48e-08!4;UBERON:0009616!2.48e-08!4;UBERON:0002257!4.01e-07!3;UBERON:0002038!6.85e-07!3;UBERON:0002308!6.85e-07!3;UBERON:0009663!6.85e-07!3;UBERON:0009661!6.85e-07!3;UBERON:0006331!6.85e-07!3;UBERON:0000125!6.85e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.35e-25,6;UBERON:0005174,2.35e-25,6;UBERON:0001137,2.35e-25,6;UBERON:0001948,1.26e-21,5;UBERON:0002315,1.26e-21,5;UBERON:0002420,2.33e-19,8;UBERON:0007245,2.33e-19,8;UBERON:0010009,2.33e-19,8;UBERON:0010011,2.33e-19,8;UBERON:0000454,2.33e-19,8;UBERON:0003076,9.82e-17,12;UBERON:0003057,9.82e-17,12;UBERON:0001017,3.07e-16,73;UBERON:0001016,9.96e-16,75;UBERON:0000073,2.66e-15,54;UBERON:0001049,7.27e-14,52;UBERON:0005068,7.27e-14,52;UBERON:0006241,7.27e-14,52;UBERON:0007135,7.27e-14,52;UBERON:0002257,7.30e-14,3;UBERON:0002020,8.72e-14,34;UBERON:0002038,2.37e-13,3;UBERON:0009663,2.37e-13,3;UBERON:0009661,2.37e-13,3;UBERON:0000125,2.37e-13,3;UBERON:0002308,2.37e-13,3;UBERON:0004121,8.50e-12,95;UBERON:0000924,8.50e-12,95;UBERON:0006601,8.50e-12,95;UBERON:0002346,8.13e-11,64;UBERON:0003075,8.13e-11,64;UBERON:0007284,8.13e-11,64;UBERON:0002950,3.82e-10,4;UBERON:0001891,3.82e-10,4;UBERON:0009616,3.82e-10,4;UBERON:0010286,3.82e-10,4;UBERON:0002256,2.00e-09,2;UBERON:0010371,3.48e-09,73;UBERON:0000369,9.71e-09,5;UBERON:0002435,9.71e-09,5;UBERON:0000204,9.71e-09,5;UBERON:0010082,9.71e-09,5;UBERON:0000489,6.65e-07,21;UBERON:0010314,8.71e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64169629547276,4.23192783417626,0,0,0,0,0,0,0,0,0,0,0,2.28520787523043,1.32521124570968,0,0,0,1.10115880999389,0,1.0752457327937,4.48413378282659,4.29991924931325,1.56274011167028,1.11673199600552,3.37657566019008,1.5279824777681,2.06240009831567,2.84743361598206,2.79599168737951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0.125654352112864,0,0,1.0389402227978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55681021376265,2.79317411380722,1.02440163452481,0.486213434136588,0.628839487883947,0.551530525350042,0,0,0.320919209591815,0.252697211763798,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.543216455383447,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.999242311751784,0.233931608445408,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64169629547276,4.23192783417626,0,0,0,0,0,0,0,0,0,0,0,2.28520787523043,1.32521124570968,0,0,0,1.10115880999389,0,1.0752457327937,4.48413378282659,4.29991924931325,1.56274011167028,1.11673199600552,3.37657566019008,1.5279824777681,2.06240009831567,2.84743361598206,2.79599168737951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0.125654352112864,0,0,1.0389402227978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55681021376265,2.79317411380722,1.02440163452481,0.486213434136588,0.628839487883947,0.551530525350042,0,0,0.320919209591815,0.252697211763798,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.543216455383447,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.999242311751784,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p3@Otp | |short_description=p3@Otp | ||
}} | }} |
Revision as of 01:28, 15 November 2012
Short description: | p3@Otp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Otp_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -15bp_to_ENSMUST00000022195, NM_011021, uc007rly.1_5end |
EntrezGene: | Otp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.46e-40 | 23 |
neuroblast (sensu Vertebrata) | 5.46e-40 | 23 |
neuron | 3.85e-27 | 33 |
neuronal stem cell | 3.85e-27 | 33 |
neuroblast | 3.85e-27 | 33 |
electrically signaling cell | 3.85e-27 | 33 |
electrically responsive cell | 1.38e-22 | 39 |
electrically active cell | 1.38e-22 | 39 |
neural cell | 2.97e-20 | 43 |
ectodermal cell | 9.77e-20 | 44 |
neurectodermal cell | 9.77e-20 | 44 |
striatum neuron | 2.98e-14 | 3 |
neuron of the ventral spinal cord | 7.30e-14 | 3 |
neuron of the substantia nigra | 2.37e-13 | 3 |
embryonic cell | 1.85e-11 | 70 |
neuron of the dorsal spinal cord | 2.00e-09 | 2 |
somatic stem cell | 3.27e-08 | 91 |
multi fate stem cell | 3.27e-08 | 91 |
stem cell | 1.53e-07 | 97 |
granule cell | 4.88e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.