FFCP PHASE1:Mm9::chr19:55967883..55967888,+: Difference between revisions
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|id=chr19:55967883..55967888,+ | |id=chr19:55967883..55967888,+ | ||
|ontology_enrichment_celltype=CL:0002613!1.15e-12!3;CL:0002610!3.21e-12!3;CL:0000117!2.02e-07!23;CL:0000337!2.02e-07!23 | |ontology_enrichment_celltype=CL:0002613!1.15e-12!3;CL:0002610!3.21e-12!3;CL:0000117!2.02e-07!23;CL:0000337!2.02e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.33e-65,3;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002610,1.88e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!3.21e-12!3;UBERON:0002275!3.21e-12!3;UBERON:0000369!9.30e-08!5;UBERON:0002435!9.30e-08!5;UBERON:0000204!9.30e-08!5;UBERON:0010082!9.30e-08!5 | |ontology_enrichment_uberon=UBERON:0004684!3.21e-12!3;UBERON:0002275!3.21e-12!3;UBERON:0000369!9.30e-08!5;UBERON:0002435!9.30e-08!5;UBERON:0000204!9.30e-08!5;UBERON:0010082!9.30e-08!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.27e-40,5;UBERON:0002435,7.27e-40,5;UBERON:0000204,7.27e-40,5;UBERON:0010082,7.27e-40,5;UBERON:0002420,2.39e-25,8;UBERON:0007245,2.39e-25,8;UBERON:0010009,2.39e-25,8;UBERON:0010011,2.39e-25,8;UBERON:0000454,2.39e-25,8;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0003528,1.15e-07,29;UBERON:0002791,1.15e-07,29;UBERON:0001893,1.15e-07,29;UBERON:0000073,2.91e-07,54 | |||
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|short_description=p57@Tcf7l2 | |short_description=p57@Tcf7l2 | ||
}} | }} |
Revision as of 03:33, 15 November 2012
Short description: | p57@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_57_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | 41bp_to_ENSMUST00000145249_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.33e-65 | 3 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
raphe nuclei neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.27e-40 | 5 |
striatum | 7.27e-40 | 5 |
ventral part of telencephalon | 7.27e-40 | 5 |
future corpus striatum | 7.27e-40 | 5 |
basal ganglion | 2.39e-25 | 8 |
nuclear complex of neuraxis | 2.39e-25 | 8 |
aggregate regional part of brain | 2.39e-25 | 8 |
collection of basal ganglia | 2.39e-25 | 8 |
cerebral subcortex | 2.39e-25 | 8 |
raphe nuclei | 1.88e-08 | 3 |
reticular formation | 1.88e-08 | 3 |
brain grey matter | 1.15e-07 | 29 |
regional part of telencephalon | 1.15e-07 | 29 |
telencephalon | 1.15e-07 | 29 |
regional part of nervous system | 2.91e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.