FFCP PHASE1:Hg19::chr2:206547215..206547232,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000115!2.02e-13!35;CL:0000220!1.47e-12!246;CL:0000222!2.26e-12!119;CL:0002321!2.31e-12!248;CL:0000213!1.40e-11!57;CL:0000215!1.40e-11!57;CL:0002078!6.16e-11!44;CL:0002139!1.01e-10!24;CL:0000055!9.08e-08!180;CL:0000071!1.45e-07!18;CL:0002546!1.45e-07!18 | |ontology_enrichment_celltype=CL:0000115!2.02e-13!35;CL:0000220!1.47e-12!246;CL:0000222!2.26e-12!119;CL:0002321!2.31e-12!248;CL:0000213!1.40e-11!57;CL:0000215!1.40e-11!57;CL:0002078!6.16e-11!44;CL:0002139!1.01e-10!24;CL:0000055!9.08e-08!180;CL:0000071!1.45e-07!18;CL:0002546!1.45e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000115;7.14e-12;36!CL:0002139;9.17e-11;24!CL:0002078;9.10e-08;45!CL:0000071;1.38e-07;18!CL:0000213;4.22e-07;58!CL:0000215;4.22e-07;58 | |ontology_enrichment_celltype_v019=CL:0000115;7.14e-12;36!CL:0002139;9.17e-11;24!CL:0002078;9.10e-08;45!CL:0000071;1.38e-07;18!CL:0000213;4.22e-07;58!CL:0000215;4.22e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.67e-14,36;CL:0002321,1.05e-12,250;CL:0000222,1.13e-12,121;CL:0000213,7.37e-12,58;CL:0000215,7.37e-12,58;CL:0002078,2.36e-11,45;CL:0002139,8.80e-11,24;CL:0000071,1.33e-07,18;CL:0002546,1.33e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.38e-07;18 | |ontology_enrichment_development_v019=CL:0002546;1.38e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.27e-17!659;UBERON:0000467!8.15e-16!625;UBERON:0000480!1.88e-15!626;UBERON:0000922!1.21e-12!612;UBERON:0002049!4.45e-12!79;UBERON:0007798!4.45e-12!79;UBERON:0002050!5.08e-12!605;UBERON:0005423!5.08e-12!605;UBERON:0000923!9.14e-12!604;UBERON:0005291!9.14e-12!604;UBERON:0006598!9.14e-12!604;UBERON:0002532!9.14e-12!604;UBERON:0000055!2.50e-10!69;UBERON:0001981!1.12e-08!60;UBERON:0007500!1.12e-08!60;UBERON:0004537!1.12e-08!60;UBERON:0006965!1.12e-08!60;UBERON:0003914!1.25e-08!118;UBERON:0000487!3.13e-08!22;UBERON:0000483!5.49e-08!309;UBERON:0000062!5.80e-08!511;UBERON:0000119!1.04e-07!312;UBERON:0001986!1.45e-07!18;UBERON:0004638!1.45e-07!18;UBERON:0004852!1.45e-07!18;UBERON:0004111!1.64e-07!241;UBERON:0000490!2.80e-07!138;UBERON:0006914!4.94e-07!25;UBERON:0004872!5.63e-07!84;UBERON:0000025!7.94e-07!194 | |ontology_enrichment_uberon=UBERON:0000468!7.27e-17!659;UBERON:0000467!8.15e-16!625;UBERON:0000480!1.88e-15!626;UBERON:0000922!1.21e-12!612;UBERON:0002049!4.45e-12!79;UBERON:0007798!4.45e-12!79;UBERON:0002050!5.08e-12!605;UBERON:0005423!5.08e-12!605;UBERON:0000923!9.14e-12!604;UBERON:0005291!9.14e-12!604;UBERON:0006598!9.14e-12!604;UBERON:0002532!9.14e-12!604;UBERON:0000055!2.50e-10!69;UBERON:0001981!1.12e-08!60;UBERON:0007500!1.12e-08!60;UBERON:0004537!1.12e-08!60;UBERON:0006965!1.12e-08!60;UBERON:0003914!1.25e-08!118;UBERON:0000487!3.13e-08!22;UBERON:0000483!5.49e-08!309;UBERON:0000062!5.80e-08!511;UBERON:0000119!1.04e-07!312;UBERON:0001986!1.45e-07!18;UBERON:0004638!1.45e-07!18;UBERON:0004852!1.45e-07!18;UBERON:0004111!1.64e-07!241;UBERON:0000490!2.80e-07!138;UBERON:0006914!4.94e-07!25;UBERON:0004872!5.63e-07!84;UBERON:0000025!7.94e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;3.00e-08;22!UBERON:0000490;1.30e-07;33!UBERON:0004638;1.38e-07;18!UBERON:0001986;1.38e-07;18!UBERON:0004852;1.38e-07;18!UBERON:0006914;7.05e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0000487;3.00e-08;22!UBERON:0000490;1.30e-07;33!UBERON:0004638;1.38e-07;18!UBERON:0001986;1.38e-07;18!UBERON:0004852;1.38e-07;18!UBERON:0006914;7.05e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,4.18e-13,581;UBERON:0002050,5.32e-13,564;UBERON:0000922,1.51e-12,592;UBERON:0000923,1.63e-12,560;UBERON:0010316,1.63e-12,560;UBERON:0005291,1.63e-12,560;UBERON:0006598,1.63e-12,560;UBERON:0010317,1.63e-12,560;UBERON:0002532,1.63e-12,560;UBERON:0002049,1.29e-11,78;UBERON:0007798,1.29e-11,78;UBERON:0000055,6.44e-10,68;UBERON:0000926,2.18e-09,315;UBERON:0004120,2.18e-09,315;UBERON:0006603,2.18e-09,315;UBERON:0003914,2.13e-08,117;UBERON:0000487,2.84e-08,22;UBERON:0007500,3.17e-08,59;UBERON:0001981,3.17e-08,59;UBERON:0004537,3.17e-08,59;UBERON:0006965,3.17e-08,59;UBERON:0000483,3.93e-08,306;UBERON:0000119,7.54e-08,309;UBERON:0004638,1.33e-07,18;UBERON:0001986,1.33e-07,18;UBERON:0004852,1.33e-07,18;UBERON:0004111,1.60e-07,240;UBERON:0006914,6.42e-07,25 | |||
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| ||
|short_description=p1@NRP2 | |short_description=p1@NRP2 | ||
}} | }} |
Revision as of 22:12, 19 November 2012
Short description: | p1@NRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NRP2_5end |
Coexpression cluster: | C4174_Endothelial_mesenchymal_epithelioid_Hepatic_migratory_Neural_Mast |
Association with transcript: | 0bp_to_ENST00000355117, ENST00000360409, ENST00000417189, ENST00000450507, ENST00000540178, ENST00000540841, NM_003872, NM_018534, NM_201264, NM_201266, NM_201267, NM_201279, uc002vat.2, uc002vau.2, uc002vav.2, uc002vaw.2, uc002vax.2, uc002vay.2_5end |
EntrezGene: | NRP2 |
HGNC: | 8005 |
UniProt: | E9PF66O60462C9JH98F5H1G4F5H2X3Q7LBX6Q7Z3T9Q9H2E2Q7LBX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.67e-14 | 36 |
embryonic cell | 1.05e-12 | 250 |
mesodermal cell | 1.13e-12 | 121 |
lining cell | 7.37e-12 | 58 |
barrier cell | 7.37e-12 | 58 |
meso-epithelial cell | 2.36e-11 | 45 |
endothelial cell of vascular tree | 8.80e-11 | 24 |
blood vessel endothelial cell | 1.33e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.33e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 4.18e-13 | 581 |
embryonic structure | 5.32e-13 | 564 |
embryo | 1.51e-12 | 592 |
germ layer | 1.63e-12 | 560 |
germ layer / neural crest | 1.63e-12 | 560 |
embryonic tissue | 1.63e-12 | 560 |
presumptive structure | 1.63e-12 | 560 |
germ layer / neural crest derived structure | 1.63e-12 | 560 |
epiblast (generic) | 1.63e-12 | 560 |
vasculature | 1.29e-11 | 78 |
vascular system | 1.29e-11 | 78 |
vessel | 6.44e-10 | 68 |
mesoderm | 2.18e-09 | 315 |
mesoderm-derived structure | 2.18e-09 | 315 |
presumptive mesoderm | 2.18e-09 | 315 |
epithelial tube | 2.13e-08 | 117 |
simple squamous epithelium | 2.84e-08 | 22 |
epithelial tube open at both ends | 3.17e-08 | 59 |
blood vessel | 3.17e-08 | 59 |
blood vasculature | 3.17e-08 | 59 |
vascular cord | 3.17e-08 | 59 |
epithelium | 3.93e-08 | 306 |
cell layer | 7.54e-08 | 309 |
blood vessel endothelium | 1.33e-07 | 18 |
endothelium | 1.33e-07 | 18 |
cardiovascular system endothelium | 1.33e-07 | 18 |
anatomical conduit | 1.60e-07 | 240 |
squamous epithelium | 6.42e-07 | 25 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.