FFCP PHASE1:Hg19::chr15:39886511..39886611,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!4.69e-18!180;CL:0002371!7.42e-17!591;CL:0000057!2.90e-15!75;CL:0000144!3.45e-13!625;CL:0000222!1.06e-12!119;CL:0000220!2.46e-12!246;CL:0002321!5.90e-12!248;CL:0002139!6.42e-12!24;CL:0000115!4.33e-11!35;CL:0000548!1.08e-10!679;CL:0000004!1.08e-10!679;CL:0000255!1.08e-10!679;CL:0000012!2.52e-10!682;CL:0002078!5.78e-10!44;CL:0000071!6.97e-09!18;CL:0002546!6.97e-09!18;CL:0000192!1.50e-07!42;CL:0000514!1.50e-07!42;CL:0000359!2.01e-07!32;CL:0002620!3.08e-07!23;CL:0002334!3.90e-07!12;CL:0000213!4.63e-07!57;CL:0000215!4.63e-07!57;CL:0000680!7.24e-07!57;CL:0000056!7.24e-07!57;CL:0000355!7.24e-07!57 | |ontology_enrichment_celltype=CL:0000055!4.69e-18!180;CL:0002371!7.42e-17!591;CL:0000057!2.90e-15!75;CL:0000144!3.45e-13!625;CL:0000222!1.06e-12!119;CL:0000220!2.46e-12!246;CL:0002321!5.90e-12!248;CL:0002139!6.42e-12!24;CL:0000115!4.33e-11!35;CL:0000548!1.08e-10!679;CL:0000004!1.08e-10!679;CL:0000255!1.08e-10!679;CL:0000012!2.52e-10!682;CL:0002078!5.78e-10!44;CL:0000071!6.97e-09!18;CL:0002546!6.97e-09!18;CL:0000192!1.50e-07!42;CL:0000514!1.50e-07!42;CL:0000359!2.01e-07!32;CL:0002620!3.08e-07!23;CL:0002334!3.90e-07!12;CL:0000213!4.63e-07!57;CL:0000215!4.63e-07!57;CL:0000680!7.24e-07!57;CL:0000056!7.24e-07!57;CL:0000355!7.24e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.36e-14;24!CL:0000071;1.30e-10;18!CL:0000115;2.70e-10;36!CL:0002620;6.51e-08;23!CL:0002334;1.36e-07;12!CL:0000359;2.10e-07;32!CL:0002078;2.57e-07;45!CL:0000349;4.57e-07;19!CL:0000057;8.40e-07;73 | |ontology_enrichment_celltype_v019=CL:0002139;2.36e-14;24!CL:0000071;1.30e-10;18!CL:0000115;2.70e-10;36!CL:0002620;6.51e-08;23!CL:0002334;1.36e-07;12!CL:0000359;2.10e-07;32!CL:0002078;2.57e-07;45!CL:0000349;4.57e-07;19!CL:0000057;8.40e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.84e-17,76;CL:0002139,2.58e-14,24;CL:0000222,6.86e-12,121;CL:0000115,8.68e-12,36;CL:0000071,1.40e-10,18;CL:0002546,1.40e-10,18;CL:0002078,7.48e-10,45;CL:0000723,2.54e-09,433;CL:0002321,4.05e-09,250;CL:0000048,8.62e-09,427;CL:0000034,2.70e-08,441;CL:0002620,6.90e-08,23;CL:0000359,8.19e-08,32;CL:0002334,1.37e-07,12;CL:0000213,1.86e-07,58;CL:0000215,1.86e-07,58;CL:0000192,2.21e-07,43;CL:0000514,2.21e-07,43;CL:0000349,5.16e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;1.30e-10;18 | |ontology_enrichment_development_v019=CL:0002546;1.30e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.66e-17!79;UBERON:0007798!1.66e-17!79;UBERON:0000055!1.68e-17!69;UBERON:0004872!9.97e-17!84;UBERON:0000468!3.95e-16!659;UBERON:0001981!1.00e-15!60;UBERON:0007500!1.00e-15!60;UBERON:0004537!1.00e-15!60;UBERON:0006965!1.00e-15!60;UBERON:0000467!1.65e-14!625;UBERON:0000480!1.82e-14!626;UBERON:0001009!1.38e-13!113;UBERON:0004535!1.72e-13!110;UBERON:0003914!4.58e-13!118;UBERON:0003102!5.76e-12!95;UBERON:0001637!1.17e-11!42;UBERON:0003509!1.17e-11!42;UBERON:0004572!1.17e-11!42;UBERON:0000490!4.93e-11!138;UBERON:0000926!3.58e-10!448;UBERON:0004120!3.58e-10!448;UBERON:0006603!3.58e-10!448;UBERON:0002100!1.65e-09!216;UBERON:0002199!2.15e-09!45;UBERON:0002416!2.15e-09!45;UBERON:0005256!6.65e-09!143;UBERON:0001986!6.97e-09!18;UBERON:0004638!6.97e-09!18;UBERON:0004852!6.97e-09!18;UBERON:0000914!1.10e-08!83;UBERON:0002329!1.10e-08!83;UBERON:0003077!1.10e-08!83;UBERON:0003059!1.10e-08!83;UBERON:0007282!1.10e-08!83;UBERON:0009618!1.10e-08!83;UBERON:0007285!1.10e-08!83;UBERON:0000487!1.27e-08!22;UBERON:0000486!1.50e-08!82;UBERON:0004573!2.16e-08!33;UBERON:0004571!2.16e-08!33;UBERON:0002097!2.45e-08!40;UBERON:0006914!5.13e-08!25;UBERON:0000475!4.18e-07!365;UBERON:0004923!4.51e-07!57;UBERON:0003081!5.27e-07!216;UBERON:0004290!9.75e-07!70 | |ontology_enrichment_uberon=UBERON:0002049!1.66e-17!79;UBERON:0007798!1.66e-17!79;UBERON:0000055!1.68e-17!69;UBERON:0004872!9.97e-17!84;UBERON:0000468!3.95e-16!659;UBERON:0001981!1.00e-15!60;UBERON:0007500!1.00e-15!60;UBERON:0004537!1.00e-15!60;UBERON:0006965!1.00e-15!60;UBERON:0000467!1.65e-14!625;UBERON:0000480!1.82e-14!626;UBERON:0001009!1.38e-13!113;UBERON:0004535!1.72e-13!110;UBERON:0003914!4.58e-13!118;UBERON:0003102!5.76e-12!95;UBERON:0001637!1.17e-11!42;UBERON:0003509!1.17e-11!42;UBERON:0004572!1.17e-11!42;UBERON:0000490!4.93e-11!138;UBERON:0000926!3.58e-10!448;UBERON:0004120!3.58e-10!448;UBERON:0006603!3.58e-10!448;UBERON:0002100!1.65e-09!216;UBERON:0002199!2.15e-09!45;UBERON:0002416!2.15e-09!45;UBERON:0005256!6.65e-09!143;UBERON:0001986!6.97e-09!18;UBERON:0004638!6.97e-09!18;UBERON:0004852!6.97e-09!18;UBERON:0000914!1.10e-08!83;UBERON:0002329!1.10e-08!83;UBERON:0003077!1.10e-08!83;UBERON:0003059!1.10e-08!83;UBERON:0007282!1.10e-08!83;UBERON:0009618!1.10e-08!83;UBERON:0007285!1.10e-08!83;UBERON:0000487!1.27e-08!22;UBERON:0000486!1.50e-08!82;UBERON:0004573!2.16e-08!33;UBERON:0004571!2.16e-08!33;UBERON:0002097!2.45e-08!40;UBERON:0006914!5.13e-08!25;UBERON:0000475!4.18e-07!365;UBERON:0004923!4.51e-07!57;UBERON:0003081!5.27e-07!216;UBERON:0004290!9.75e-07!70 | ||
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| ||
|short_description=p12@THBS1 | |short_description=p12@THBS1 | ||
}} | }} |
Revision as of 00:30, 20 November 2012
Short description: | p12@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 242bp_to_ENST00000559746_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.84e-17 | 76 |
endothelial cell of vascular tree | 2.58e-14 | 24 |
mesodermal cell | 6.86e-12 | 121 |
endothelial cell | 8.68e-12 | 36 |
blood vessel endothelial cell | 1.40e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.40e-10 | 18 |
meso-epithelial cell | 7.48e-10 | 45 |
somatic stem cell | 2.54e-09 | 433 |
embryonic cell | 4.05e-09 | 250 |
multi fate stem cell | 8.62e-09 | 427 |
stem cell | 2.70e-08 | 441 |
skin fibroblast | 6.90e-08 | 23 |
vascular associated smooth muscle cell | 8.19e-08 | 32 |
preadipocyte | 1.37e-07 | 12 |
lining cell | 1.86e-07 | 58 |
barrier cell | 1.86e-07 | 58 |
smooth muscle cell | 2.21e-07 | 43 |
smooth muscle myoblast | 2.21e-07 | 43 |
extraembryonic cell | 5.16e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.30e-18 | 68 |
splanchnic layer of lateral plate mesoderm | 8.99e-17 | 83 |
vasculature | 1.27e-16 | 78 |
vascular system | 1.27e-16 | 78 |
epithelial tube open at both ends | 1.86e-16 | 59 |
blood vessel | 1.86e-16 | 59 |
blood vasculature | 1.86e-16 | 59 |
vascular cord | 1.86e-16 | 59 |
epithelial tube | 1.49e-12 | 117 |
artery | 3.50e-12 | 42 |
arterial blood vessel | 3.50e-12 | 42 |
arterial system | 3.50e-12 | 42 |
surface structure | 4.78e-12 | 99 |
cardiovascular system | 1.58e-11 | 109 |
circulatory system | 5.06e-11 | 112 |
integument | 7.46e-11 | 46 |
integumental system | 7.46e-11 | 46 |
blood vessel endothelium | 1.40e-10 | 18 |
endothelium | 1.40e-10 | 18 |
cardiovascular system endothelium | 1.40e-10 | 18 |
simple squamous epithelium | 1.55e-10 | 22 |
unilaminar epithelium | 4.60e-10 | 148 |
squamous epithelium | 5.08e-10 | 25 |
skin of body | 6.17e-10 | 41 |
mesoderm | 1.04e-08 | 315 |
mesoderm-derived structure | 1.04e-08 | 315 |
presumptive mesoderm | 1.04e-08 | 315 |
organ component layer | 1.16e-08 | 66 |
lateral plate mesoderm | 2.01e-08 | 203 |
systemic artery | 2.56e-08 | 33 |
systemic arterial system | 2.56e-08 | 33 |
multilaminar epithelium | 2.91e-07 | 83 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.