FFCP PHASE1:Hg19::chr10:17270214..17270247,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!1.54e-29!42;CL:0000738!6.26e-27!140;CL:0000860!2.61e-26!45;CL:0000766!3.01e-26!76;CL:0000557!3.14e-26!71;CL:0000839!6.43e-23!70;CL:0002009!8.05e-23!65;CL:0002031!1.73e-22!124;CL:0002194!1.43e-21!63;CL:0000576!1.43e-21!63;CL:0000040!1.43e-21!63;CL:0000559!1.43e-21!63;CL:0002087!1.86e-21!119;CL:0002320!1.28e-17!365;CL:0000134!1.68e-17!358;CL:0000988!2.04e-17!182;CL:0000037!2.70e-17!172;CL:0000566!2.70e-17!172;CL:0000219!1.60e-15!390;CL:0002032!6.67e-15!165;CL:0000837!6.67e-15!165;CL:0000763!4.80e-13!112;CL:0000049!4.80e-13!112;CL:0000048!6.88e-13!430;CL:0000034!6.10e-12!444;CL:0000723!1.25e-11!436;CL:0002393!5.49e-07!9;CL:0002397!5.49e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.54e-29!42;CL:0000738!6.26e-27!140;CL:0000860!2.61e-26!45;CL:0000766!3.01e-26!76;CL:0000557!3.14e-26!71;CL:0000839!6.43e-23!70;CL:0002009!8.05e-23!65;CL:0002031!1.73e-22!124;CL:0002194!1.43e-21!63;CL:0000576!1.43e-21!63;CL:0000040!1.43e-21!63;CL:0000559!1.43e-21!63;CL:0002087!1.86e-21!119;CL:0002320!1.28e-17!365;CL:0000134!1.68e-17!358;CL:0000988!2.04e-17!182;CL:0000037!2.70e-17!172;CL:0000566!2.70e-17!172;CL:0000219!1.60e-15!390;CL:0002032!6.67e-15!165;CL:0000837!6.67e-15!165;CL:0000763!4.80e-13!112;CL:0000049!4.80e-13!112;CL:0000048!6.88e-13!430;CL:0000034!6.10e-12!444;CL:0000723!1.25e-11!436;CL:0002393!5.49e-07!9;CL:0002397!5.49e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.03e-37;33!CL:0002057;3.03e-37;33!CL:0000576;2.95e-26;48!CL:0000473;3.97e-26;39!CL:0000234;3.97e-26;39!CL:0000766;1.14e-21;69!CL:0002087;1.14e-09;104!CL:0000738;8.19e-09;136!CL:0002393;4.63e-08;6!CL:0002397;4.63e-08;6!CL:0000763;8.35e-08;100!CL:0000097;8.36e-07;5 | |ontology_enrichment_celltype_v019=CL:0000860;3.03e-37;33!CL:0002057;3.03e-37;33!CL:0000576;2.95e-26;48!CL:0000473;3.97e-26;39!CL:0000234;3.97e-26;39!CL:0000766;1.14e-21;69!CL:0002087;1.14e-09;104!CL:0000738;8.19e-09;136!CL:0002393;4.63e-08;6!CL:0002397;4.63e-08;6!CL:0000763;8.35e-08;100!CL:0000097;8.36e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.31e-51,42;CL:0002057,9.31e-51,42;CL:0000766,2.63e-46,72;CL:0000557,4.13e-45,67;CL:0000473,4.23e-44,48;CL:0000234,4.23e-44,48;CL:0000839,2.38e-40,66;CL:0002009,4.72e-39,61;CL:0000738,8.54e-38,136;CL:0002194,7.96e-37,59;CL:0000576,7.96e-37,59;CL:0000040,7.96e-37,59;CL:0000559,7.96e-37,59;CL:0002031,2.89e-31,120;CL:0002087,5.11e-28,115;CL:0000763,2.14e-27,108;CL:0000049,2.14e-27,108;CL:0000037,2.96e-27,168;CL:0000988,1.67e-24,177;CL:0002032,1.31e-23,161;CL:0000837,1.31e-23,161;CL:0000134,5.30e-18,354;CL:0002320,1.52e-17,361;CL:0000219,1.90e-15,386;CL:0000048,1.09e-11,427;CL:0000034,1.17e-11,441;CL:0002393,4.43e-11,9;CL:0002397,4.43e-11,9;CL:0000723,4.55e-11,433;CL:0000097,5.34e-07,5;CL:0002028,5.34e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.97e-36;42!CL:0000049;7.71e-08;108 | |ontology_enrichment_development_v019=CL:0002057;1.97e-36;42!CL:0000049;7.71e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.96e-29!112;UBERON:0002390!4.92e-28!102;UBERON:0003061!4.92e-28!102;UBERON:0002371!1.91e-24!80;UBERON:0001474!1.46e-23!86;UBERON:0004765!1.12e-20!101;UBERON:0001434!1.12e-20!101;UBERON:0002405!1.63e-19!115;UBERON:0002384!5.79e-18!375;UBERON:0003081!5.85e-15!216;UBERON:0002204!5.58e-10!167 | |ontology_enrichment_uberon=UBERON:0002193!3.96e-29!112;UBERON:0002390!4.92e-28!102;UBERON:0003061!4.92e-28!102;UBERON:0002371!1.91e-24!80;UBERON:0001474!1.46e-23!86;UBERON:0004765!1.12e-20!101;UBERON:0001434!1.12e-20!101;UBERON:0002405!1.63e-19!115;UBERON:0002384!5.79e-18!375;UBERON:0003081!5.85e-15!216;UBERON:0002204!5.58e-10!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.74e-40,98;UBERON:0003061,2.74e-40,98;UBERON:0002371,4.66e-39,76;UBERON:0001474,2.16e-37,82;UBERON:0002193,1.95e-36,108;UBERON:0004765,1.74e-33,90;UBERON:0002405,1.21e-31,93;UBERON:0001434,2.68e-30,100;UBERON:0003081,7.77e-21,203;UBERON:0002384,3.40e-17,371;UBERON:0002204,3.81e-13,167;UBERON:0000926,2.32e-10,315;UBERON:0004120,2.32e-10,315;UBERON:0006603,2.32e-10,315 | |||
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| ||
|short_description=p5@VIM | |short_description=p5@VIM | ||
}} | }} |
Revision as of 09:54, 21 November 2012
Short description: | p5@VIM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_VIM_5end |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | -10bp_to_ENST00000478317, ENST00000544301, NM_003380, uc001iou.2_5end |
EntrezGene: | VIM |
HGNC: | 12692 |
UniProt: | P08670 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.74e-40 | 98 |
blood island | 2.74e-40 | 98 |
bone marrow | 4.66e-39 | 76 |
bone element | 2.16e-37 | 82 |
hemolymphoid system | 1.95e-36 | 108 |
skeletal element | 1.74e-33 | 90 |
immune system | 1.21e-31 | 93 |
skeletal system | 2.68e-30 | 100 |
lateral plate mesoderm | 7.77e-21 | 203 |
connective tissue | 3.40e-17 | 371 |
musculoskeletal system | 3.81e-13 | 167 |
mesoderm | 2.32e-10 | 315 |
mesoderm-derived structure | 2.32e-10 | 315 |
presumptive mesoderm | 2.32e-10 | 315 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.