FFCP PHASE1:Hg19::chr10:104178483..104178500,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5662|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9507|TSSclassifier=W|UniProt=A5PKW4|association_with_transcript=400bp_to_ENST00000020673,NM_002779,uc001kvg.1_5end|coexpression_cluster_id=C2972|description=CAGE_peak_5_at_PSD_5end|id=chr10:104178483..104178500,-|ontology_enrichment_celltype=CL:0002322!1.75e-10!5;CL:0000047!1.98e-09!8;CL:0000540!6.53e-09!6;CL:0000031!6.53e-09!6;CL:0000404!6.53e-09!6|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.90e-14;82!UBERON:0010122;3.60e-09;2!UBERON:0006238;3.91e-09;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.15e-79!82;UBERON:0005743!1.55e-77!86;UBERON:0000073!7.89e-77!94;UBERON:0001016!7.89e-77!94;UBERON:0001049!2.10e-69!57;UBERON:0005068!2.10e-69!57;UBERON:0006241!2.10e-69!57;UBERON:0007135!2.10e-69!57;UBERON:0002780!7.78e-68!41;UBERON:0001890!7.78e-68!41;UBERON:0006240!7.78e-68!41;UBERON:0000955!1.11e-66!69;UBERON:0006238!1.11e-66!69;UBERON:0003080!5.41e-66!42;UBERON:0002616!1.74e-63!59;UBERON:0001869!4.56e-57!32;UBERON:0001893!8.37e-57!34;UBERON:0002020!1.78e-56!34;UBERON:0003528!1.78e-56!34;UBERON:0002791!1.25e-54!33;UBERON:0002346!1.17e-52!90;UBERON:0003075!4.33e-51!86;UBERON:0007284!4.33e-51!86;UBERON:0002619!3.23e-48!22;UBERON:0003056!1.10e-47!61;UBERON:0001950!1.51e-43!20;UBERON:0000956!7.60e-42!25;UBERON:0000203!7.60e-42!25;UBERON:0000924!1.08e-40!173;UBERON:0006601!1.08e-40!173;UBERON:0004121!5.26e-39!169;UBERON:0000033!2.77e-35!123;UBERON:0000153!5.16e-33!129;UBERON:0007811!5.16e-33!129;UBERON:0007023!1.21e-31!115;UBERON:0001871!1.29e-19!7;UBERON:0002420!6.20e-17!9;UBERON:0007245!6.20e-17!9;UBERON:0010009!6.20e-17!9;UBERON:0010011!6.20e-17!9;UBERON:0000454!6.20e-17!9;UBERON:0002308!9.31e-16!9;UBERON:0000125!9.31e-16!9;UBERON:0000200!1.04e-14!6;UBERON:0000349!2.89e-13!5;UBERON:0000025!1.12e-12!194;UBERON:0001872!1.32e-12!5;UBERON:0009663!2.24e-12!7;UBERON:0001894!4.31e-12!7;UBERON:0006222!4.31e-12!7;UBERON:0000369!1.09e-10!4;UBERON:0002435!1.09e-10!4;UBERON:0000204!1.09e-10!4;UBERON:0010082!1.09e-10!4;UBERON:0003296!2.20e-10!4;UBERON:0010133!2.20e-10!4;UBERON:0004111!1.30e-08!241;UBERON:0000064!1.63e-08!219;UBERON:0002771!2.03e-08!3;UBERON:0005383!2.13e-08!3;UBERON:0005382!2.13e-08!3;UBERON:0002021!2.33e-08!5;UBERON:0000483!9.99e-08!309;UBERON:0003076!1.16e-07!15;UBERON:0003057!1.16e-07!15;UBERON:0004733!1.40e-07!12;UBERON:0002028!1.40e-07!12;UBERON:0007277!1.40e-07!12;UBERON:0000119!1.55e-07!312;UBERON:0004732!6.35e-07!13;UBERON:0000988!6.40e-07!3|ontology_enrichment_uberon_v019=UBERON:0002619;1.30e-81;22!UBERON:0001869;4.66e-81;32!UBERON:0002791;6.69e-76;32!UBERON:0001950;1.06e-73;20!UBERON:0001893;5.07e-72;34!UBERON:0000956;1.49e-71;25!UBERON:0000203;1.49e-71;25!UBERON:0003528;8.42e-71;34!UBERON:0002020;8.42e-71;34!UBERON:0002780;6.22e-65;41!UBERON:0001890;6.22e-65;41!UBERON:0000073;2.19e-38;53!UBERON:0002616;2.19e-38;53!UBERON:0000955;1.56e-34;68!UBERON:0001017;4.91e-31;75!UBERON:0001871;1.79e-28;6!UBERON:0001016;1.32e-24;83!UBERON:0000200;5.14e-24;6!UBERON:0002420;7.44e-22;9!UBERON:0007245;7.44e-22;9!UBERON:0010009;7.44e-22;9!UBERON:0010011;7.44e-22;9!UBERON:0000454;7.44e-22;9!UBERON:0000349;2.65e-21;5!UBERON:0001872;2.81e-20;5!UBERON:0000369;4.51e-17;4!UBERON:0002435;4.51e-17;4!UBERON:0000204;4.51e-17;4!UBERON:0009663;1.58e-14;7!UBERON:0002021;2.04e-13;5!UBERON:0005383;3.39e-13;3!UBERON:0005382;3.39e-13;3!UBERON:0001870;6.95e-13;3!UBERON:0011216;5.05e-12;132!UBERON:0000125;3.09e-11;9!UBERON:0002308;3.09e-11;9!UBERON:0007023;3.67e-10;114!UBERON:0003296;3.84e-10;4!UBERON:0010133;3.84e-10;4!UBERON:0001905;5.17e-10;2!UBERON:0002757;5.17e-10;2!UBERON:0010134;5.17e-10;2!UBERON:0005408;5.17e-10;2!UBERON:0001899;5.17e-10;2!UBERON:0001894;1.07e-09;7!UBERON:0001876;1.09e-09;2!UBERON:0001954;1.81e-09;2!UBERON:0003022;1.81e-09;2!UBERON:0002421;1.81e-09;2!UBERON:0002600;1.81e-09;2!UBERON:0002771;2.48e-09;2!UBERON:0001873;3.60e-09;2!UBERON:0002702;3.83e-09;2!UBERON:0010314;4.23e-08;132|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.89e-93,41;UBERON:0001890,3.89e-93,41;UBERON:0003080,3.89e-93,41;UBERON:0006240,3.89e-93,41;UBERON:0001869,2.46e-91,32;UBERON:0001893,1.02e-85,34;UBERON:0002791,9.39e-85,32;UBERON:0002619,1.10e-81,22;UBERON:0003528,1.58e-79,34;UBERON:0002020,1.58e-79,34;UBERON:0001950,1.13e-73,20;UBERON:0000955,2.45e-72,68;UBERON:0006238,2.45e-72,68;UBERON:0000956,1.28e-71,25;UBERON:0000203,1.28e-71,25;UBERON:0000073,9.89e-71,53;UBERON:0002616,9.89e-71,53;UBERON:0001017,1.56e-70,81;UBERON:0003056,1.01e-68,61;UBERON:0001049,1.33e-66,56;UBERON:0005068,1.33e-66,56;UBERON:0006241,1.33e-66,56;UBERON:0007135,1.33e-66,56;UBERON:0001016,9.03e-63,89;UBERON:0003075,2.65e-49,82;UBERON:0007284,2.65e-49,82;UBERON:0002346,1.14e-46,86;UBERON:0010371,2.73e-37,104;UBERON:0004121,9.76e-31,171;UBERON:0000924,9.76e-31,171;UBERON:0006601,9.76e-31,171;UBERON:0010314,8.72e-30,132;UBERON:0007023,2.73e-29,114;UBERON:0001871,1.87e-28,6;UBERON:0011216,7.43e-26,223;UBERON:0000200,6.06e-24,6;UBERON:0002420,5.88e-22,9;UBERON:0007245,5.88e-22,9;UBERON:0010009,5.88e-22,9;UBERON:0010011,5.88e-22,9;UBERON:0000454,5.88e-22,9;UBERON:0000349,1.75e-21,5;UBERON:0001872,2.35e-20,5;UBERON:0000369,4.33e-17,4;UBERON:0002435,4.33e-17,4;UBERON:0000204,4.33e-17,4;UBERON:0010082,4.33e-17,4;UBERON:0009663,1.39e-14,7;UBERON:0000025,2.70e-14,192;UBERON:0002021,2.08e-13,5;UBERON:0005383,3.39e-13,3;UBERON:0005382,3.39e-13,3;UBERON:0001870,8.02e-13,3;UBERON:0000125,2.81e-11,9;UBERON:0002308,2.81e-11,9;UBERON:0003296,4.21e-10,4;UBERON:0010133,4.21e-10,4;UBERON:0001905,5.29e-10,2;UBERON:0002757,5.29e-10,2;UBERON:0010134,5.29e-10,2;UBERON:0005408,5.29e-10,2;UBERON:0001899,5.29e-10,2;UBERON:0004111,5.54e-10,240;UBERON:0001876,9.64e-10,2;UBERON:0001894,1.25e-09,7;UBERON:0006222,1.25e-09,7;UBERON:0001954,1.41e-09,2;UBERON:0003022,1.41e-09,2;UBERON:0002421,1.41e-09,2;UBERON:0002600,1.41e-09,2;UBERON:0002771,2.43e-09,2;UBERON:0001873,3.38e-09,2;UBERON:0010122,3.38e-09,2;UBERON:0002702,3.99e-09,2;UBERON:0000483,2.51e-08,306;UBERON:0000119,3.58e-08,309|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.662648841607426,0.116193942869518,0.518305275076852,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,8.58083440104128,0,0,0,0,0,2.77126022639704,0,0,0,0,0,0,0,0,0,3.87733098438087,3.06134723934109,23.9536557601433,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,1.77148277162768,8.07996138790233,0,0.552896299656123,0.295547618953547,3.94893714877151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,2.10838001152805,0,0,0,0,1.20990716048664,5.50930970934882,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58186518546373,0,0,3.22885059374981,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,1.80126086612937,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15706720828373,3.94989877723569,0.321506296930038,0.275078873194468,1.24632101408756,0,0,5.28521142924815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,3.90484047686282,4.63206443614049,0,0.110929051536852,0.310482014706917,2.76697269872462,0,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.539124056983409,0,0.982886743728125,0,0.212574920101683,0.495743057036009,0,0,0,0,0,0,4.752962657138,0,3.03304332208587,3.48697819209284,7.56215088665154,2.97376185596137,5.81312324274664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03919130782776,3.90539049306924,2.68692835451539,3.48786956066487,7.11067251723685,0,0,0,0,13.3925458969572,11.43364655544,1.21393120847326,0.91064876540519,0,0,0,0.679697329768317,2.69668371607681,0,0,0,7.07020154622009,0,1.82631744101899,0,0,1.50100742770978,2.52821778772363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,1.39265542612958,0,0,0.329821550236287,0,0,0.218559560503957,3.29222107453066,0,0,0.588925401344836,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,4.35145537221854,8.29066311646717,1.0580536810308,0,0,0,0,0.327796715891087,11.9096590950751,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@PSD}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5662 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9507 | |||
|TSSclassifier=W | |||
|UniProt=A5PKW4 | |||
|association_with_transcript=400bp_to_ENST00000020673,NM_002779,uc001kvg.1_5end | |||
|coexpression_cluster_id=C2972 | |||
|description=CAGE_peak_5_at_PSD_5end | |||
|id=chr10:104178483..104178500,- | |||
|ontology_enrichment_celltype=CL:0002322!1.75e-10!5;CL:0000047!1.98e-09!8;CL:0000540!6.53e-09!6;CL:0000031!6.53e-09!6;CL:0000404!6.53e-09!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.90e-14;82!UBERON:0010122;3.60e-09;2!UBERON:0006238;3.91e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@PSD | |||
}} |
Revision as of 11:26, 10 September 2013
Short description: | p5@PSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PSD_5end |
Coexpression cluster: | C2972_brain_pineal_temporal_parietal_occipital_duodenum_putamen |
Association with transcript: | 400bp_to_ENST00000020673, NM_002779, uc001kvg.1_5end |
EntrezGene: | PSD |
HGNC: | 9507 |
UniProt: | A5PKW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.