FFCP PHASE1:Hg19::chr10:104393374..104393395,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:104393374..104393395,+|id=chr10:104393374..104393395,+|ontology_enrichment_celltype=CL:0002057!3.79e-21!42;CL:0000860!3.08e-19!45;CL:0002393!5.44e-19!9;CL:0002397!5.44e-19!9;CL:0000222!4.54e-15!119;CL:0000766!9.07e-15!76;CL:0002194!1.11e-13!63;CL:0000576!1.11e-13!63;CL:0000040!1.11e-13!63;CL:0000559!1.11e-13!63;CL:0002009!4.88e-13!65;CL:0000071!6.04e-13!18;CL:0002546!6.04e-13!18;CL:0000144!1.05e-11!625;CL:0000359!1.20e-11!32;CL:0000839!1.33e-11!70;CL:0000557!2.44e-11!71;CL:0002371!1.07e-10!591;CL:0000763!2.25e-10!112;CL:0000049!2.25e-10!112;CL:0000048!3.95e-10!430;CL:0000213!4.71e-10!57;CL:0000215!4.71e-10!57;CL:0000080!5.16e-10!6;CL:0000723!1.04e-09!436;CL:0000548!3.38e-09!679;CL:0000004!3.38e-09!679;CL:0000255!3.38e-09!679;CL:0000034!3.58e-09!444;CL:0000192!4.78e-09!42;CL:0000514!4.78e-09!42;CL:0000012!4.86e-09!682;CL:0002139!5.92e-09!24;CL:0000115!8.29e-09!35;CL:0000187!9.87e-08!54;CL:0000003!1.20e-07!722;CL:0002543!1.37e-07!6;CL:0000875!1.41e-07!3;CL:0002396!1.41e-07!3;CL:0000183!1.48e-07!59;CL:1000413!1.56e-07!9;CL:0000988!1.76e-07!182;CL:0000738!2.23e-07!140;CL:0002087!3.99e-07!119;CL:0000680!4.42e-07!57;CL:0000056!4.42e-07!57;CL:0000355!4.42e-07!57|ontology_enrichment_celltype_v019=CL:0002393;4.16e-38;6!CL:0002397;4.16e-38;6!CL:0000875;2.25e-28;3!CL:0002396;2.25e-28;3!CL:0000511;2.50e-10;1!CL:0002625;2.50e-10;1!CL:0000216;2.50e-10;1!CL:0000576;3.83e-08;48!CL:0000766;5.13e-07;69|ontology_enrichment_celltype_v019_2=CL:0002393,2.09e-64,9;CL:0002397,2.09e-64,9;CL:0000875,1.18e-28,3;CL:0002396,1.18e-28,3;CL:0000860,1.96e-16,42;CL:0002057,1.96e-16,42;CL:0000473,3.18e-14,48;CL:0000234,3.18e-14,48;CL:0000766,2.26e-13,72;CL:0002194,3.97e-11,59;CL:0000576,3.97e-11,59;CL:0000040,3.97e-11,59;CL:0000559,3.97e-11,59;CL:0002009,9.98e-11,61;CL:0000511,1.57e-10,1;CL:0002625,1.57e-10,1;CL:0000216,1.57e-10,1;CL:0000839,7.84e-10,66;CL:0000557,1.14e-09,67;CL:0000763,2.21e-08,108;CL:0000049,2.21e-08,108;CL:0000738,1.30e-07,136|ontology_enrichment_development_v019=CL:0002057;6.51e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!2.95e-28!216;UBERON:0004535!7.54e-22!110;UBERON:0001009!6.37e-21!113;UBERON:0004872!2.51e-19!84;UBERON:0001981!5.02e-19!60;UBERON:0007500!5.02e-19!60;UBERON:0004537!5.02e-19!60;UBERON:0006965!5.02e-19!60;UBERON:0001637!1.89e-18!42;UBERON:0003509!1.89e-18!42;UBERON:0004572!1.89e-18!42;UBERON:0000055!8.00e-17!69;UBERON:0002049!7.26e-16!79;UBERON:0007798!7.26e-16!79;UBERON:0003914!2.17e-15!118;UBERON:0002204!5.76e-13!167;UBERON:0001986!6.04e-13!18;UBERON:0004638!6.04e-13!18;UBERON:0004852!6.04e-13!18;UBERON:0004573!6.28e-13!33;UBERON:0004571!6.28e-13!33;UBERON:0000487!4.34e-12!22;UBERON:0002390!5.82e-12!102;UBERON:0003061!5.82e-12!102;UBERON:0002193!5.49e-11!112;UBERON:0006914!3.13e-10!25;UBERON:0002371!3.56e-10!80;UBERON:0000926!1.17e-09!448;UBERON:0004120!1.17e-09!448;UBERON:0006603!1.17e-09!448;UBERON:0001474!5.59e-09!86;UBERON:0000490!8.61e-08!138;UBERON:0003915!1.56e-07!9;UBERON:0004700!1.56e-07!9;UBERON:0001917!1.56e-07!9;UBERON:0004765!2.74e-07!101;UBERON:0001434!2.74e-07!101;UBERON:0002405!6.36e-07!115|ontology_enrichment_uberon_v019=UBERON:0001136;2.50e-10;1!UBERON:0001343;2.50e-10;1!UBERON:0004910;2.50e-10;1!UBERON:0004813;2.50e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.26e-11,203;UBERON:0001136,1.57e-10,1;UBERON:0001343,1.57e-10,1;UBERON:0004910,1.57e-10,1;UBERON:0005154,1.57e-10,1;UBERON:0005295,1.57e-10,1;UBERON:0004813,1.57e-10,1;UBERON:0005297,1.57e-10,1;UBERON:0005294,1.57e-10,1;UBERON:0010141,1.57e-10,1;UBERON:0005891,1.57e-10,1;UBERON:0002371,2.17e-08,76;UBERON:0002390,9.78e-08,98;UBERON:0003061,9.78e-08,98;UBERON:0001474,1.09e-07,82;UBERON:0000926,2.14e-07,315;UBERON:0004120,2.14e-07,315;UBERON:0006603,2.14e-07,315;UBERON:0004765,6.66e-07,90;UBERON:0002193,6.90e-07,108|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,1.10799081706375,1.60435557976113,0.868043482863407,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0.619412741790207,0,0,0,0,0,0,0.376484679085209,0.545812300115692,0.449446968890169,0,0,0,0,0,0,0.870627715885752,0,0.622822248995575,0,0,0,0.605399502633369,1.10483290796269,0.316462387440884,2.32380814943136,3.4016687994407,2.72556239160889,0.336985893439485,0.901061357049038,0.64290234678832,7.98035682475496,2.78483348078726,1.64397738388171,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.596287222100115,4.30117297553062,0,0.56530794192401,0.419499436209906,0.550236083880135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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:104393374..104393395,+ | |||
|id=chr10:104393374..104393395,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.79e-21!42;CL:0000860!3.08e-19!45;CL:0002393!5.44e-19!9;CL:0002397!5.44e-19!9;CL:0000222!4.54e-15!119;CL:0000766!9.07e-15!76;CL:0002194!1.11e-13!63;CL:0000576!1.11e-13!63;CL:0000040!1.11e-13!63;CL:0000559!1.11e-13!63;CL:0002009!4.88e-13!65;CL:0000071!6.04e-13!18;CL:0002546!6.04e-13!18;CL:0000144!1.05e-11!625;CL:0000359!1.20e-11!32;CL:0000839!1.33e-11!70;CL:0000557!2.44e-11!71;CL:0002371!1.07e-10!591;CL:0000763!2.25e-10!112;CL:0000049!2.25e-10!112;CL:0000048!3.95e-10!430;CL:0000213!4.71e-10!57;CL:0000215!4.71e-10!57;CL:0000080!5.16e-10!6;CL:0000723!1.04e-09!436;CL:0000548!3.38e-09!679;CL:0000004!3.38e-09!679;CL:0000255!3.38e-09!679;CL:0000034!3.58e-09!444;CL:0000192!4.78e-09!42;CL:0000514!4.78e-09!42;CL:0000012!4.86e-09!682;CL:0002139!5.92e-09!24;CL:0000115!8.29e-09!35;CL:0000187!9.87e-08!54;CL:0000003!1.20e-07!722;CL:0002543!1.37e-07!6;CL:0000875!1.41e-07!3;CL:0002396!1.41e-07!3;CL:0000183!1.48e-07!59;CL:1000413!1.56e-07!9;CL:0000988!1.76e-07!182;CL:0000738!2.23e-07!140;CL:0002087!3.99e-07!119;CL:0000680!4.42e-07!57;CL:0000056!4.42e-07!57;CL:0000355!4.42e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.16e-38;6!CL:0002397;4.16e-38;6!CL:0000875;2.25e-28;3!CL:0002396;2.25e-28;3!CL:0000511;2.50e-10;1!CL:0002625;2.50e-10;1!CL:0000216;2.50e-10;1!CL:0000576;3.83e-08;48!CL:0000766;5.13e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.09e-64,9;CL:0002397,2.09e-64,9;CL:0000875,1.18e-28,3;CL:0002396,1.18e-28,3;CL:0000860,1.96e-16,42;CL:0002057,1.96e-16,42;CL:0000473,3.18e-14,48;CL:0000234,3.18e-14,48;CL:0000766,2.26e-13,72;CL:0002194,3.97e-11,59;CL:0000576,3.97e-11,59;CL:0000040,3.97e-11,59;CL:0000559,3.97e-11,59;CL:0002009,9.98e-11,61;CL:0000511,1.57e-10,1;CL:0002625,1.57e-10,1;CL:0000216,1.57e-10,1;CL:0000839,7.84e-10,66;CL:0000557,1.14e-09,67;CL:0000763,2.21e-08,108;CL:0000049,2.21e-08,108;CL:0000738,1.30e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.51e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.95e-28!216;UBERON:0004535!7.54e-22!110;UBERON:0001009!6.37e-21!113;UBERON:0004872!2.51e-19!84;UBERON:0001981!5.02e-19!60;UBERON:0007500!5.02e-19!60;UBERON:0004537!5.02e-19!60;UBERON:0006965!5.02e-19!60;UBERON:0001637!1.89e-18!42;UBERON:0003509!1.89e-18!42;UBERON:0004572!1.89e-18!42;UBERON:0000055!8.00e-17!69;UBERON:0002049!7.26e-16!79;UBERON:0007798!7.26e-16!79;UBERON:0003914!2.17e-15!118;UBERON:0002204!5.76e-13!167;UBERON:0001986!6.04e-13!18;UBERON:0004638!6.04e-13!18;UBERON:0004852!6.04e-13!18;UBERON:0004573!6.28e-13!33;UBERON:0004571!6.28e-13!33;UBERON:0000487!4.34e-12!22;UBERON:0002390!5.82e-12!102;UBERON:0003061!5.82e-12!102;UBERON:0002193!5.49e-11!112;UBERON:0006914!3.13e-10!25;UBERON:0002371!3.56e-10!80;UBERON:0000926!1.17e-09!448;UBERON:0004120!1.17e-09!448;UBERON:0006603!1.17e-09!448;UBERON:0001474!5.59e-09!86;UBERON:0000490!8.61e-08!138;UBERON:0003915!1.56e-07!9;UBERON:0004700!1.56e-07!9;UBERON:0001917!1.56e-07!9;UBERON:0004765!2.74e-07!101;UBERON:0001434!2.74e-07!101;UBERON:0002405!6.36e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.50e-10;1!UBERON:0001343;2.50e-10;1!UBERON:0004910;2.50e-10;1!UBERON:0004813;2.50e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.26e-11,203;UBERON:0001136,1.57e-10,1;UBERON:0001343,1.57e-10,1;UBERON:0004910,1.57e-10,1;UBERON:0005154,1.57e-10,1;UBERON:0005295,1.57e-10,1;UBERON:0004813,1.57e-10,1;UBERON:0005297,1.57e-10,1;UBERON:0005294,1.57e-10,1;UBERON:0010141,1.57e-10,1;UBERON:0005891,1.57e-10,1;UBERON:0002371,2.17e-08,76;UBERON:0002390,9.78e-08,98;UBERON:0003061,9.78e-08,98;UBERON:0001474,1.09e-07,82;UBERON:0000926,2.14e-07,315;UBERON:0004120,2.14e-07,315;UBERON:0006603,2.14e-07,315;UBERON:0004765,6.66e-07,90;UBERON:0002193,6.90e-07,108 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,1.10799081706375,1.60435557976113,0.868043482863407,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0.619412741790207,0,0,0,0,0,0,0.376484679085209,0.545812300115692,0.449446968890169,0,0,0,0,0,0,0.870627715885752,0,0.622822248995575,0,0,0,0.605399502633369,1.10483290796269,0.316462387440884,2.32380814943136,3.4016687994407,2.72556239160889,0.336985893439485,0.901061357049038,0.64290234678832,7.98035682475496,2.78483348078726,1.64397738388171,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.596287222100115,4.30117297553062,0,0.56530794192401,0.419499436209906,0.550236083880135,0.835979866147242,0,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,3.06633274931766,0,0.916008719652036,1.31780417436063,0,0,0,0,0.397227542439656,0,0,0,1.06748995729705,0.49333509683432,0.311211035399766,0,0.490385709340376,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.50999940573032,0.533637789017222,0,0,0,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0.340187410553031,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0.869932992075073,0.55597265731176,0.143124886741991,0,0,0,0,0,0.95460974377781,1.56989728039846,0,0,0,0.404364963146632,1.58510321173008,0,0.48763373908959,0.243713489631284,0,0,0,0,1.65409603063837,0.66343897524122,0.438450885253763,0,0,0.811641507850816,0,0.281695602532241,0,0,0.7133421029625,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.463044948647668,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0.337884881306145,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:104393374..104393395,+ | |||
}} |
Revision as of 11:27, 10 September 2013
Short description: | p@chr10:104393374..104393395, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:104393374..104393395, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.09e-64 | 9 |
CD14-positive, CD16-positive monocyte | 2.09e-64 | 9 |
non-classical monocyte | 1.18e-28 | 3 |
CD14-low, CD16-positive monocyte | 1.18e-28 | 3 |
classical monocyte | 1.96e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-16 | 42 |
defensive cell | 3.18e-14 | 48 |
phagocyte | 3.18e-14 | 48 |
myeloid leukocyte | 2.26e-13 | 72 |
monopoietic cell | 3.97e-11 | 59 |
monocyte | 3.97e-11 | 59 |
monoblast | 3.97e-11 | 59 |
promonocyte | 3.97e-11 | 59 |
macrophage dendritic cell progenitor | 9.98e-11 | 61 |
androgen binding protein secreting cell | 1.57e-10 | 1 |
seminiferous tubule epithelial cell | 1.57e-10 | 1 |
Sertoli cell | 1.57e-10 | 1 |
myeloid lineage restricted progenitor cell | 7.84e-10 | 66 |
granulocyte monocyte progenitor cell | 1.14e-09 | 67 |
myeloid cell | 2.21e-08 | 108 |
common myeloid progenitor | 2.21e-08 | 108 |
leukocyte | 1.30e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.26e-11 | 203 |
mesothelium | 1.57e-10 | 1 |
seminiferous tubule of testis | 1.57e-10 | 1 |
epithelium of male gonad | 1.57e-10 | 1 |
epithelial cord | 1.57e-10 | 1 |
sex cord | 1.57e-10 | 1 |
seminiferous tubule epithelium | 1.57e-10 | 1 |
testis sex cord | 1.57e-10 | 1 |
genital ridge | 1.57e-10 | 1 |
primitive sex cord of indifferent gonad | 1.57e-10 | 1 |
coelomic epithelium | 1.57e-10 | 1 |
bone marrow | 2.17e-08 | 76 |
hematopoietic system | 9.78e-08 | 98 |
blood island | 9.78e-08 | 98 |
bone element | 1.09e-07 | 82 |
mesoderm | 2.14e-07 | 315 |
mesoderm-derived structure | 2.14e-07 | 315 |
presumptive mesoderm | 2.14e-07 | 315 |
skeletal element | 6.66e-07 | 90 |
hemolymphoid system | 6.90e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.