FFCP PHASE1:Hg19::chr10:115082678..115082691,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:115082678..115082691,-|id=chr10:115082678..115082691,-|ontology_enrichment_celltype=CL:0002057!4.57e-98!42;CL:0000860!4.98e-91!45;CL:0002009!9.50e-68!65;CL:0002194!8.98e-62!63;CL:0000576!8.98e-62!63;CL:0000040!8.98e-62!63;CL:0000559!8.98e-62!63;CL:0000557!1.89e-61!71;CL:0000766!4.84e-57!76;CL:0000839!6.12e-55!70;CL:0000738!7.64e-50!140;CL:0002087!5.34e-46!119;CL:0000763!2.76e-41!112;CL:0000049!2.76e-41!112;CL:0002031!4.86e-41!124;CL:0000037!5.58e-39!172;CL:0000566!5.58e-39!172;CL:0002393!7.51e-39!9;CL:0002397!7.51e-39!9;CL:0000988!2.32e-36!182;CL:0002032!1.35e-32!165;CL:0000837!1.35e-32!165;CL:0000134!4.33e-15!358;CL:0002320!1.26e-14!365;CL:0000875!4.10e-14!3;CL:0002396!4.10e-14!3;CL:0000842!8.20e-14!3;CL:0000219!5.54e-13!390;CL:0000034!3.33e-11!444;CL:0000048!5.13e-11!430;CL:0000723!9.76e-11!436;CL:0000224!1.79e-10!4;CL:0001014!4.17e-09!2;CL:0001016!4.17e-09!2;CL:0000080!4.10e-07!6|ontology_enrichment_celltype_v019=CL:0002393;1.39e-53;6!CL:0002397;1.39e-53;6!CL:0000576;5.84e-41;48!CL:0000766;1.23e-29;69!CL:0000860;1.25e-28;33!CL:0002057;1.25e-28;33!CL:0000875;1.30e-27;3!CL:0002396;1.30e-27;3!CL:0000473;1.01e-20;39!CL:0000234;1.01e-20;39!CL:0002087;2.20e-17;104!CL:0000226;5.99e-13;3!CL:0000842;5.99e-13;3!CL:0000763;2.06e-11;100!CL:0000738;1.28e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,3.04e-83,42;CL:0002057,3.04e-83,42;CL:0002393,6.03e-80,9;CL:0002397,6.03e-80,9;CL:0000473,1.67e-72,48;CL:0000234,1.67e-72,48;CL:0002194,1.86e-57,59;CL:0000576,1.86e-57,59;CL:0000040,1.86e-57,59;CL:0000559,1.86e-57,59;CL:0002009,1.63e-55,61;CL:0000839,3.64e-51,66;CL:0000557,2.26e-50,67;CL:0000766,9.90e-47,72;CL:0002087,8.22e-35,115;CL:0000763,2.36e-30,108;CL:0000049,2.36e-30,108;CL:0000738,5.04e-29,136;CL:0000875,8.22e-28,3;CL:0002396,8.22e-28,3;CL:0002031,4.71e-27,120;CL:0000037,5.84e-23,168;CL:0000988,1.21e-21,177;CL:0002032,1.88e-19,161;CL:0000837,1.88e-19,161;CL:0000226,5.81e-13,3;CL:0000842,5.81e-13,3;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441|ontology_enrichment_development_v019=CL:0002057;1.72e-56;42!CL:0000049;4.10e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!9.43e-54!80;UBERON:0002390!3.18e-52!102;UBERON:0003061!3.18e-52!102;UBERON:0001474!1.67e-49!86;UBERON:0002193!7.33e-47!112;UBERON:0004765!4.55e-41!101;UBERON:0001434!4.55e-41!101;UBERON:0002405!3.66e-35!115;UBERON:0002204!7.53e-22!167;UBERON:0003081!2.31e-20!216;UBERON:0002384!5.46e-14!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.71e-44,76;UBERON:0002390,2.75e-41,98;UBERON:0003061,2.75e-41,98;UBERON:0001474,9.23e-41,82;UBERON:0002193,3.11e-37,108;UBERON:0004765,6.29e-37,90;UBERON:0002405,1.17e-35,93;UBERON:0001434,5.49e-33,100;UBERON:0002204,1.19e-18,167;UBERON:0003081,1.71e-18,203;UBERON:0000926,8.25e-11,315;UBERON:0004120,8.25e-11,315;UBERON:0006603,8.25e-11,315;UBERON:0002384,1.10e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0,0,0,0,5.53995408531877,3.00816671205213,4.55722828503289,0,0,0,0,0.377875943688809,0,0,0,0.619412741790207,0.28769239232215,0.512321413058201,1.41889337933151,10.6871161028352,5.16387746867061,4.06279459783025,0.376484679085209,0,0.449446968890169,23.8745436049304,17.6510964891852,26.2128221577607,0,0.199463657621632,0,1.45104619314292,0,0.622822248995575,0.251248665256743,0,1.3031330682307,0.605399502633369,1.47311054395026,3.48108626184973,1.47878700418359,1.91343869968539,1.88692780957538,0.44931452458598,0,0.64290234678832,5.13022938734247,1.9891667719909,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.15714200818617,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:115082678..115082691,- | |||
|id=chr10:115082678..115082691,- | |||
|ontology_enrichment_celltype=CL:0002057!4.57e-98!42;CL:0000860!4.98e-91!45;CL:0002009!9.50e-68!65;CL:0002194!8.98e-62!63;CL:0000576!8.98e-62!63;CL:0000040!8.98e-62!63;CL:0000559!8.98e-62!63;CL:0000557!1.89e-61!71;CL:0000766!4.84e-57!76;CL:0000839!6.12e-55!70;CL:0000738!7.64e-50!140;CL:0002087!5.34e-46!119;CL:0000763!2.76e-41!112;CL:0000049!2.76e-41!112;CL:0002031!4.86e-41!124;CL:0000037!5.58e-39!172;CL:0000566!5.58e-39!172;CL:0002393!7.51e-39!9;CL:0002397!7.51e-39!9;CL:0000988!2.32e-36!182;CL:0002032!1.35e-32!165;CL:0000837!1.35e-32!165;CL:0000134!4.33e-15!358;CL:0002320!1.26e-14!365;CL:0000875!4.10e-14!3;CL:0002396!4.10e-14!3;CL:0000842!8.20e-14!3;CL:0000219!5.54e-13!390;CL:0000034!3.33e-11!444;CL:0000048!5.13e-11!430;CL:0000723!9.76e-11!436;CL:0000224!1.79e-10!4;CL:0001014!4.17e-09!2;CL:0001016!4.17e-09!2;CL:0000080!4.10e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.39e-53;6!CL:0002397;1.39e-53;6!CL:0000576;5.84e-41;48!CL:0000766;1.23e-29;69!CL:0000860;1.25e-28;33!CL:0002057;1.25e-28;33!CL:0000875;1.30e-27;3!CL:0002396;1.30e-27;3!CL:0000473;1.01e-20;39!CL:0000234;1.01e-20;39!CL:0002087;2.20e-17;104!CL:0000226;5.99e-13;3!CL:0000842;5.99e-13;3!CL:0000763;2.06e-11;100!CL:0000738;1.28e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.04e-83,42;CL:0002057,3.04e-83,42;CL:0002393,6.03e-80,9;CL:0002397,6.03e-80,9;CL:0000473,1.67e-72,48;CL:0000234,1.67e-72,48;CL:0002194,1.86e-57,59;CL:0000576,1.86e-57,59;CL:0000040,1.86e-57,59;CL:0000559,1.86e-57,59;CL:0002009,1.63e-55,61;CL:0000839,3.64e-51,66;CL:0000557,2.26e-50,67;CL:0000766,9.90e-47,72;CL:0002087,8.22e-35,115;CL:0000763,2.36e-30,108;CL:0000049,2.36e-30,108;CL:0000738,5.04e-29,136;CL:0000875,8.22e-28,3;CL:0002396,8.22e-28,3;CL:0002031,4.71e-27,120;CL:0000037,5.84e-23,168;CL:0000988,1.21e-21,177;CL:0002032,1.88e-19,161;CL:0000837,1.88e-19,161;CL:0000226,5.81e-13,3;CL:0000842,5.81e-13,3;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-56;42!CL:0000049;4.10e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.43e-54!80;UBERON:0002390!3.18e-52!102;UBERON:0003061!3.18e-52!102;UBERON:0001474!1.67e-49!86;UBERON:0002193!7.33e-47!112;UBERON:0004765!4.55e-41!101;UBERON:0001434!4.55e-41!101;UBERON:0002405!3.66e-35!115;UBERON:0002204!7.53e-22!167;UBERON:0003081!2.31e-20!216;UBERON:0002384!5.46e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.71e-44,76;UBERON:0002390,2.75e-41,98;UBERON:0003061,2.75e-41,98;UBERON:0001474,9.23e-41,82;UBERON:0002193,3.11e-37,108;UBERON:0004765,6.29e-37,90;UBERON:0002405,1.17e-35,93;UBERON:0001434,5.49e-33,100;UBERON:0002204,1.19e-18,167;UBERON:0003081,1.71e-18,203;UBERON:0000926,8.25e-11,315;UBERON:0004120,8.25e-11,315;UBERON:0006603,8.25e-11,315;UBERON:0002384,1.10e-08,371 | |||
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|short_description=p@chr10:115082678..115082691,- | |||
}} |
Revision as of 11:49, 10 September 2013
Short description: | p@chr10:115082678..115082691, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:115082678..115082691, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.71e-44 | 76 |
hematopoietic system | 2.75e-41 | 98 |
blood island | 2.75e-41 | 98 |
bone element | 9.23e-41 | 82 |
hemolymphoid system | 3.11e-37 | 108 |
skeletal element | 6.29e-37 | 90 |
immune system | 1.17e-35 | 93 |
skeletal system | 5.49e-33 | 100 |
musculoskeletal system | 1.19e-18 | 167 |
lateral plate mesoderm | 1.71e-18 | 203 |
mesoderm | 8.25e-11 | 315 |
mesoderm-derived structure | 8.25e-11 | 315 |
presumptive mesoderm | 8.25e-11 | 315 |
connective tissue | 1.10e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.