FFCP PHASE1:Hg19::chr10:3826160..3826190,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C22|description=CAGE_peak_at_chr10:3826160..3826190,-|id=chr10:3826160..3826190,-|ontology_enrichment_celltype=CL:0000738!2.55e-31!140;CL:0002057!8.56e-30!42;CL:0000860!1.46e-26!45;CL:0002087!2.25e-25!119;CL:0002031!7.20e-25!124;CL:0000766!3.56e-24!76;CL:0000557!5.87e-22!71;CL:0002009!1.57e-21!65;CL:0002194!4.44e-20!63;CL:0000576!4.44e-20!63;CL:0000040!4.44e-20!63;CL:0000559!4.44e-20!63;CL:0000839!6.01e-20!70;CL:0000037!9.59e-20!172;CL:0000566!9.59e-20!172;CL:0002032!1.79e-19!165;CL:0000837!1.79e-19!165;CL:0000988!6.55e-18!182;CL:0000763!4.88e-14!112;CL:0000049!4.88e-14!112;CL:0000791!3.32e-10!18;CL:0000789!3.32e-10!18;CL:0002420!3.32e-10!18;CL:0002419!3.32e-10!18;CL:0000790!3.32e-10!18;CL:0002393!4.81e-08!9;CL:0002397!4.81e-08!9;CL:0000624!8.73e-07!6|ontology_enrichment_celltype_v019=CL:0000860;8.92e-25;33!CL:0002057;8.92e-25;33!CL:0000473;1.11e-20;39!CL:0000234;1.11e-20;39!CL:0000766;3.68e-20;69!CL:0000576;7.08e-19;48!CL:0000624;1.10e-14;6!CL:0000791;3.61e-14;18!CL:0000789;3.61e-14;18!CL:0002419;3.61e-14;18!CL:0000623;1.52e-11;3!CL:0000775;2.81e-10;3!CL:0002087;3.96e-10;104!CL:0000094;6.04e-10;8!CL:0000738;8.76e-10;136!CL:0000084;1.06e-09;25!CL:0002393;6.52e-09;6!CL:0002397;6.52e-09;6!CL:0000763;4.97e-08;100!CL:0001014;1.66e-07;2!CL:0001016;1.66e-07;2!CL:0000081;3.82e-07;11!CL:0000988;8.16e-07;177|ontology_enrichment_celltype_v019_2=CL:0000738,1.83e-44,136;CL:0002031,6.10e-38,120;CL:0000766,5.67e-37,72;CL:0000860,2.58e-34,42;CL:0002057,2.58e-34,42;CL:0002032,4.77e-34,161;CL:0000837,4.77e-34,161;CL:0000037,6.88e-34,168;CL:0000557,3.43e-32,67;CL:0000473,4.95e-32,48;CL:0000234,4.95e-32,48;CL:0000988,1.34e-31,177;CL:0002087,1.62e-31,115;CL:0002009,5.15e-28,61;CL:0000839,6.50e-28,66;CL:0000763,1.72e-25,108;CL:0000049,1.72e-25,108;CL:0002194,2.23e-24,59;CL:0000576,2.23e-24,59;CL:0000040,2.23e-24,59;CL:0000559,2.23e-24,59;CL:0000624,7.36e-15,6;CL:0000791,3.07e-14,18;CL:0000789,3.07e-14,18;CL:0002420,3.07e-14,18;CL:0002419,3.07e-14,18;CL:0000790,3.07e-14,18;CL:0000623,1.53e-11,3;CL:0000825,1.53e-11,3;CL:0000134,5.37e-11,354;CL:0002320,1.44e-10,361;CL:0000775,2.18e-10,3;CL:0000094,4.18e-10,8;CL:0000084,9.52e-10,25;CL:0000827,9.52e-10,25;CL:0000219,4.58e-09,386;CL:0002393,1.12e-08,9;CL:0002397,1.12e-08,9;CL:0000838,2.32e-08,52;CL:0000542,3.77e-08,53;CL:0000051,3.77e-08,53;CL:0000048,7.86e-08,427;CL:0000723,1.44e-07,433;CL:0001014,2.09e-07,2;CL:0001016,2.09e-07,2;CL:0000081,2.95e-07,11;CL:0000034,3.12e-07,441|ontology_enrichment_development_v019=CL:0002057;6.26e-24;42!CL:0000790;3.61e-14;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.46e-19!102;UBERON:0003061!7.46e-19!102;UBERON:0002371!4.80e-18!80;UBERON:0002193!6.83e-18!112;UBERON:0001474!4.02e-16!86;UBERON:0002405!4.21e-13!115;UBERON:0004765!5.48e-12!101;UBERON:0001434!5.48e-12!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.51e-27,76;UBERON:0001474,5.15e-25,82;UBERON:0002390,2.75e-23,98;UBERON:0003061,2.75e-23,98;UBERON:0002405,4.27e-23,93;UBERON:0004765,3.67e-22,90;UBERON:0002193,1.99e-20,108;UBERON:0001434,3.07e-19,100;UBERON:0002384,5.51e-10,371;UBERON:0002204,1.25e-09,167;UBERON:0003081,5.97e-09,203|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,2.36018566109342,1.91914699048606,0.619264493264304,0,0,0.739508020333575,0,0.142169232487422,0,1.66198622559563,2.4065333696417,2.38711957787437,0,0.32389366601898,0,0.581592955118259,0,0.727752183563449,1.16214518452842,0.822335776043652,1.85823822537062,1.1507695692886,0.256160706529101,1.41889337933151,2.06847408441971,1.93645405075148,2.70852973188684,0.752969358170419,0.545812300115692,0.224723484445085,3.36692281607993,1.28371610830437,1.91801137739712,0.659702600373432,0.598390972864896,1.70489900213078,3.19230162491442,1.70215567407342,0.622822248995575,1.7587406567972,1.0429658368404,2.17188844705117,0.605399502633369,0.736555271975129,1.58231193720442,1.05627643155971,0.850417199860174,0.838634582033504,0.561643155732475,0.750884464207532,1.44653028027372,0.570025487482497,0.39783335439818,1.27864907635244,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0,3.540775862049,9.03924754323079,7.40165396398233,0.167186495390678,1.95553359980154,2.8406868344084,5.84480185223734,0.445641827540694,0.589211814949674,1.10766947291811,1.89562704635511,0.384273959177026,0.260118695119756,0,0.276350017785848,0.869409257205157,5.93146252648242,3.74557159325598,5.22677619024884,0,4.21542542962113,7.55980380061786,5.81945291644857,0.95569624297229,1.30216690771284,0,0.752875595388864,0.511946444617674,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_at_chr10:3826160..3826190,- | |||
|id=chr10:3826160..3826190,- | |||
|ontology_enrichment_celltype=CL:0000738!2.55e-31!140;CL:0002057!8.56e-30!42;CL:0000860!1.46e-26!45;CL:0002087!2.25e-25!119;CL:0002031!7.20e-25!124;CL:0000766!3.56e-24!76;CL:0000557!5.87e-22!71;CL:0002009!1.57e-21!65;CL:0002194!4.44e-20!63;CL:0000576!4.44e-20!63;CL:0000040!4.44e-20!63;CL:0000559!4.44e-20!63;CL:0000839!6.01e-20!70;CL:0000037!9.59e-20!172;CL:0000566!9.59e-20!172;CL:0002032!1.79e-19!165;CL:0000837!1.79e-19!165;CL:0000988!6.55e-18!182;CL:0000763!4.88e-14!112;CL:0000049!4.88e-14!112;CL:0000791!3.32e-10!18;CL:0000789!3.32e-10!18;CL:0002420!3.32e-10!18;CL:0002419!3.32e-10!18;CL:0000790!3.32e-10!18;CL:0002393!4.81e-08!9;CL:0002397!4.81e-08!9;CL:0000624!8.73e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.92e-25;33!CL:0002057;8.92e-25;33!CL:0000473;1.11e-20;39!CL:0000234;1.11e-20;39!CL:0000766;3.68e-20;69!CL:0000576;7.08e-19;48!CL:0000624;1.10e-14;6!CL:0000791;3.61e-14;18!CL:0000789;3.61e-14;18!CL:0002419;3.61e-14;18!CL:0000623;1.52e-11;3!CL:0000775;2.81e-10;3!CL:0002087;3.96e-10;104!CL:0000094;6.04e-10;8!CL:0000738;8.76e-10;136!CL:0000084;1.06e-09;25!CL:0002393;6.52e-09;6!CL:0002397;6.52e-09;6!CL:0000763;4.97e-08;100!CL:0001014;1.66e-07;2!CL:0001016;1.66e-07;2!CL:0000081;3.82e-07;11!CL:0000988;8.16e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.83e-44,136;CL:0002031,6.10e-38,120;CL:0000766,5.67e-37,72;CL:0000860,2.58e-34,42;CL:0002057,2.58e-34,42;CL:0002032,4.77e-34,161;CL:0000837,4.77e-34,161;CL:0000037,6.88e-34,168;CL:0000557,3.43e-32,67;CL:0000473,4.95e-32,48;CL:0000234,4.95e-32,48;CL:0000988,1.34e-31,177;CL:0002087,1.62e-31,115;CL:0002009,5.15e-28,61;CL:0000839,6.50e-28,66;CL:0000763,1.72e-25,108;CL:0000049,1.72e-25,108;CL:0002194,2.23e-24,59;CL:0000576,2.23e-24,59;CL:0000040,2.23e-24,59;CL:0000559,2.23e-24,59;CL:0000624,7.36e-15,6;CL:0000791,3.07e-14,18;CL:0000789,3.07e-14,18;CL:0002420,3.07e-14,18;CL:0002419,3.07e-14,18;CL:0000790,3.07e-14,18;CL:0000623,1.53e-11,3;CL:0000825,1.53e-11,3;CL:0000134,5.37e-11,354;CL:0002320,1.44e-10,361;CL:0000775,2.18e-10,3;CL:0000094,4.18e-10,8;CL:0000084,9.52e-10,25;CL:0000827,9.52e-10,25;CL:0000219,4.58e-09,386;CL:0002393,1.12e-08,9;CL:0002397,1.12e-08,9;CL:0000838,2.32e-08,52;CL:0000542,3.77e-08,53;CL:0000051,3.77e-08,53;CL:0000048,7.86e-08,427;CL:0000723,1.44e-07,433;CL:0001014,2.09e-07,2;CL:0001016,2.09e-07,2;CL:0000081,2.95e-07,11;CL:0000034,3.12e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.26e-24;42!CL:0000790;3.61e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.46e-19!102;UBERON:0003061!7.46e-19!102;UBERON:0002371!4.80e-18!80;UBERON:0002193!6.83e-18!112;UBERON:0001474!4.02e-16!86;UBERON:0002405!4.21e-13!115;UBERON:0004765!5.48e-12!101;UBERON:0001434!5.48e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.51e-27,76;UBERON:0001474,5.15e-25,82;UBERON:0002390,2.75e-23,98;UBERON:0003061,2.75e-23,98;UBERON:0002405,4.27e-23,93;UBERON:0004765,3.67e-22,90;UBERON:0002193,1.99e-20,108;UBERON:0001434,3.07e-19,100;UBERON:0002384,5.51e-10,371;UBERON:0002204,1.25e-09,167;UBERON:0003081,5.97e-09,203 | |||
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| |||
|short_description=p@chr10:3826160..3826190,- | |||
}} |
Revision as of 13:19, 10 September 2013
Short description: | p@chr10:3826160..3826190, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3826160..3826190, - |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.51e-27 | 76 |
bone element | 5.15e-25 | 82 |
hematopoietic system | 2.75e-23 | 98 |
blood island | 2.75e-23 | 98 |
immune system | 4.27e-23 | 93 |
skeletal element | 3.67e-22 | 90 |
hemolymphoid system | 1.99e-20 | 108 |
skeletal system | 3.07e-19 | 100 |
connective tissue | 5.51e-10 | 371 |
musculoskeletal system | 1.25e-09 | 167 |
lateral plate mesoderm | 5.97e-09 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.