FFCP PHASE1:Hg19::chr10:62704018..62704045,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9886|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18738|TSSclassifier=S|UniProt=O94844|association_with_transcript=0bp_to_NM_001242359,NM_014836,uc001jlh.2,uc001jli.2_5end|coexpression_cluster_id=C1|description=CAGE_peak_7_at_RHOBTB1_5end|id=chr10:62704018..62704045,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002032;1.30e-09;1!CL:0000228;1.30e-09;1!CL:0000557;1.30e-09;1!CL:0002372;1.30e-09;1|ontology_enrichment_celltype_v019_2=CL:0000228,9.70e-10,1;CL:0002372,9.70e-10,1|ontology_enrichment_development_v019=UBERON:0010227;1.30e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.33e-11!115;UBERON:0000468!5.84e-10!659;UBERON:0000467!1.73e-09!625;UBERON:0000480!2.29e-09!626;UBERON:0000475!3.09e-07!365|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-34;15!UBERON:0000179;1.08e-34;15!UBERON:0000463;1.08e-34;15!UBERON:0002390;4.67e-19;32!UBERON:0002193;3.07e-11;42!UBERON:0002079;1.30e-09;1!UBERON:0002426;1.30e-09;1!UBERON:0003831;1.30e-09;1!UBERON:0003898;1.30e-09;1!UBERON:0004830;1.30e-09;1!UBERON:0003830;1.30e-09;1!UBERON:0005175;1.30e-09;1!UBERON:0001774;1.30e-09;1!UBERON:0001103;1.30e-09;1!UBERON:0001134;1.83e-08;16!UBERON:0002036;1.83e-08;16|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.42e-34,15;UBERON:0000179,1.42e-34,15;UBERON:0000463,1.42e-34,15;UBERON:0007023,3.72e-10,114;UBERON:0002426,8.17e-10,1;UBERON:0003831,8.17e-10,1;UBERON:0003898,8.17e-10,1;UBERON:0004830,8.17e-10,1;UBERON:0003830,8.17e-10,1;UBERON:0005175,8.17e-10,1;UBERON:0001774,8.17e-10,1;UBERON:0001103,8.17e-10,1;UBERON:0010084,8.17e-10,1;UBERON:0002079,8.91e-10,1;UBERON:0000926,3.48e-07,315;UBERON:0004120,3.48e-07,315;UBERON:0006603,3.48e-07,315;UBERON:0001009,3.51e-07,112|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,1.78784437770915,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0.293600439334847,0,0,0,0.671746422719773,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0,0,0,0.283604451492204,0.221729397462564,0.263504357079378,2.0956652079634,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0.535798369704479,0.22452937262617,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0.993943903390637,0.12663051166458,0.529636723252875,0,0.354668382198357,0,0,1.2333377420858,0.311211035399766,0,0,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0,0.277064115484183,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0.640672166455702,0.847727604638247,0,0.412210116953756,0.257640540045629,0.558350568994769,0,0.194874010322397,0.504867548488229,0.460249493211497,0.161646056818812,0,0.201504196455281,0.339121184620975,0.193260853163297,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0.738651018262192,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.63497894292169,0,0,0,0.514137463516618,0,0.857479297891735,0.448524337381443,0,0.1466765716419,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0,0.197030760201927,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0.213455115606889,0,0,0,0.992431231275107,0.61384789315225,0,0.896974044789907,0,0.321707842287215,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0.459257792658427,0,0,0,0,0,0,0.211103257785751,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0.27470839445503,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,0.356128142586949,0.165284915360978,0,0.255225424989168,0,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0.572499546967965,0.372158369359667,0,0.38126038784765,0,0,0,0,0,0,0.235624804691373,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0.1434113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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18738 | |||
|TSSclassifier=S | |||
|UniProt=O94844 | |||
|association_with_transcript=0bp_to_NM_001242359,NM_014836,uc001jlh.2,uc001jli.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_7_at_RHOBTB1_5end | |||
|id=chr10:62704018..62704045,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.30e-09;1!CL:0000228;1.30e-09;1!CL:0000557;1.30e-09;1!CL:0002372;1.30e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,9.70e-10,1;CL:0002372,9.70e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.30e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.33e-11!115;UBERON:0000468!5.84e-10!659;UBERON:0000467!1.73e-09!625;UBERON:0000480!2.29e-09!626;UBERON:0000475!3.09e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-34;15!UBERON:0000179;1.08e-34;15!UBERON:0000463;1.08e-34;15!UBERON:0002390;4.67e-19;32!UBERON:0002193;3.07e-11;42!UBERON:0002079;1.30e-09;1!UBERON:0002426;1.30e-09;1!UBERON:0003831;1.30e-09;1!UBERON:0003898;1.30e-09;1!UBERON:0004830;1.30e-09;1!UBERON:0003830;1.30e-09;1!UBERON:0005175;1.30e-09;1!UBERON:0001774;1.30e-09;1!UBERON:0001103;1.30e-09;1!UBERON:0001134;1.83e-08;16!UBERON:0002036;1.83e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.42e-34,15;UBERON:0000179,1.42e-34,15;UBERON:0000463,1.42e-34,15;UBERON:0007023,3.72e-10,114;UBERON:0002426,8.17e-10,1;UBERON:0003831,8.17e-10,1;UBERON:0003898,8.17e-10,1;UBERON:0004830,8.17e-10,1;UBERON:0003830,8.17e-10,1;UBERON:0005175,8.17e-10,1;UBERON:0001774,8.17e-10,1;UBERON:0001103,8.17e-10,1;UBERON:0010084,8.17e-10,1;UBERON:0002079,8.91e-10,1;UBERON:0000926,3.48e-07,315;UBERON:0004120,3.48e-07,315;UBERON:0006603,3.48e-07,315;UBERON:0001009,3.51e-07,112 | |||
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| |||
|short_description=p7@RHOBTB1 | |||
}} |
Revision as of 13:51, 10 September 2013
Short description: | p7@RHOBTB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RHOBTB1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_001242359, NM_014836, uc001jlh.2, uc001jli.2_5end |
EntrezGene: | RHOBTB1 |
HGNC: | 18738 |
UniProt: | O94844 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 9.70e-10 | 1 |
myotube | 9.70e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 1.42e-34 | 15 |
haemolymphatic fluid | 1.42e-34 | 15 |
organism substance | 1.42e-34 | 15 |
adult organism | 3.72e-10 | 114 |
chest muscle | 8.17e-10 | 1 |
respiratory system muscle | 8.17e-10 | 1 |
skeletal muscle of trunk | 8.17e-10 | 1 |
respiratory system skeletal muscle | 8.17e-10 | 1 |
thoracic segment muscle | 8.17e-10 | 1 |
chest organ | 8.17e-10 | 1 |
muscle of trunk | 8.17e-10 | 1 |
diaphragm | 8.17e-10 | 1 |
future diaphragm | 8.17e-10 | 1 |
left cardiac atrium | 8.91e-10 | 1 |
mesoderm | 3.48e-07 | 315 |
mesoderm-derived structure | 3.48e-07 | 315 |
presumptive mesoderm | 3.48e-07 | 315 |
circulatory system | 3.51e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.