FFCP PHASE1:Hg19::chr10:92680096..92680111,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:92680096..92680111,-|id=chr10:92680096..92680111,-|ontology_enrichment_celltype=CL:0002139!7.60e-17!24;CL:0000222!3.70e-12!119;CL:0000071!4.09e-12!18;CL:0002546!4.09e-12!18;CL:0000115!6.68e-12!35;CL:0000213!1.18e-11!57;CL:0000215!1.18e-11!57;CL:0002078!1.02e-09!44;CL:1000413!3.49e-08!9;CL:0000220!6.91e-07!246;CL:0002321!9.62e-07!248|ontology_enrichment_celltype_v019=CL:0002138;3.56e-16;6!CL:0000515;6.78e-15;3!CL:0000222;3.64e-12;1!CL:0000056;2.08e-11;4!CL:0000115;3.92e-07;36!CL:0002139;3.94e-07;24!CL:0002321;6.84e-07;15!CL:0000680;6.88e-07;7|ontology_enrichment_celltype_v019_2=CL:0005020,3.38e-16,6;CL:0002138,3.38e-16,6;CL:0005022,3.38e-16,6;CL:0000515,1.82e-11,4;CL:0002139,3.98e-07,24;CL:0000115,4.39e-07,36|ontology_enrichment_development_v019=CL:0005022;3.56e-16;6!UBERON:0010227;2.63e-12;1!UBERON:0004140;5.62e-12;1!UBERON:0005062;1.55e-11;4!UBERON:0007284;1.55e-11;4!CL:0000515;2.08e-11;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3111;5.62e-12;1!DOID:3603;5.62e-12;1|ontology_enrichment_disease_v019_2=DOID:3111,6.97e-12,1;DOID:3603,6.97e-12,1|ontology_enrichment_uberon=UBERON:0002049!1.08e-13!79;UBERON:0007798!1.08e-13!79;UBERON:0001009!1.25e-13!113;UBERON:0001986!4.09e-12!18;UBERON:0004638!4.09e-12!18;UBERON:0004852!4.09e-12!18;UBERON:0000055!4.80e-12!69;UBERON:0004535!3.17e-11!110;UBERON:0001981!1.64e-09!60;UBERON:0007500!1.64e-09!60;UBERON:0004537!1.64e-09!60;UBERON:0006965!1.64e-09!60;UBERON:0000487!2.03e-09!22;UBERON:0006914!2.07e-09!25;UBERON:0004872!1.17e-08!84;UBERON:0003915!3.49e-08!9;UBERON:0004700!3.49e-08!9;UBERON:0001917!3.49e-08!9;UBERON:0000490!4.76e-08!138;UBERON:0003978!1.20e-07!3;UBERON:0009751!1.20e-07!3;UBERON:0000946!1.20e-07!3;UBERON:0002523!1.20e-07!3;UBERON:0005983!1.20e-07!3;UBERON:0002165!1.20e-07!3;UBERON:0002062!1.20e-07!3;UBERON:0007280!1.20e-07!3;UBERON:0003914!2.31e-07!118;UBERON:0007100!2.36e-07!27|ontology_enrichment_uberon_v019=UBERON:0003978;4.60e-15;3!UBERON:0000946;4.60e-15;3!UBERON:0002079;2.63e-12;1!UBERON:0001473;2.78e-12;8!UBERON:0004536;2.78e-12;8!UBERON:0006558;2.78e-12;8!UBERON:0002135;3.09e-12;1!UBERON:0007195;3.09e-12;1!UBERON:0002146;1.25e-11;1!UBERON:0005623;1.25e-11;1!UBERON:0007100;1.43e-10;25!UBERON:0002465;6.16e-10;10!UBERON:0000948;5.55e-08;22!UBERON:0002081;8.93e-07;2!UBERON:0002133;9.69e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003978,5.30e-15,3;UBERON:0009751,5.30e-15,3;UBERON:0000946,5.30e-15,3;UBERON:0002523,5.30e-15,3;UBERON:0005983,5.30e-15,3;UBERON:0002165,5.30e-15,3;UBERON:0002062,5.30e-15,3;UBERON:0007280,5.30e-15,3;UBERON:0002079,2.63e-12,1;UBERON:0001473,2.67e-12,8;UBERON:0004536,2.67e-12,8;UBERON:0006558,2.67e-12,8;UBERON:0002135,2.93e-12,1;UBERON:0007195,3.27e-12,1;UBERON:0002146,1.63e-11,1;UBERON:0005623,1.63e-11,1;UBERON:0002465,5.97e-10,10;UBERON:0007100,8.86e-10,27;UBERON:0001009,5.87e-08,112;UBERON:0000948,2.58e-07,24;UBERON:0005498,2.58e-07,24;UBERON:0004140,2.58e-07,24;UBERON:0009881,2.58e-07,24;UBERON:0004141,2.58e-07,24;UBERON:0003084,2.58e-07,24;UBERON:0007005,2.58e-07,24;UBERON:0004139,2.58e-07,24;UBERON:0004291,2.58e-07,24;UBERON:0004797,6.20e-07,7;UBERON:0000055,8.40e-07,68;UBERON:0002081,8.93e-07,2;UBERON:0010227,8.93e-07,2;UBERON:0002133,9.44e-07,2|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,1.19257444420023,0,0,0.56530794192401,0.838998872419812,0.550236083880135,0.835979866147242,0.775250277507987,0,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0.892997282840798,0,0.450445921933289,0,0,0.366403487860815,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0.469634776943287,1.29929802984966,2.31492756288305,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,2.46128221334885,0.205476322550383,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0.170093705276516,1.29549549661284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:92680096..92680111,- | |||
|id=chr10:92680096..92680111,- | |||
|ontology_enrichment_celltype=CL:0002139!7.60e-17!24;CL:0000222!3.70e-12!119;CL:0000071!4.09e-12!18;CL:0002546!4.09e-12!18;CL:0000115!6.68e-12!35;CL:0000213!1.18e-11!57;CL:0000215!1.18e-11!57;CL:0002078!1.02e-09!44;CL:1000413!3.49e-08!9;CL:0000220!6.91e-07!246;CL:0002321!9.62e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002138;3.56e-16;6!CL:0000515;6.78e-15;3!CL:0000222;3.64e-12;1!CL:0000056;2.08e-11;4!CL:0000115;3.92e-07;36!CL:0002139;3.94e-07;24!CL:0002321;6.84e-07;15!CL:0000680;6.88e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.38e-16,6;CL:0002138,3.38e-16,6;CL:0005022,3.38e-16,6;CL:0000515,1.82e-11,4;CL:0002139,3.98e-07,24;CL:0000115,4.39e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;3.56e-16;6!UBERON:0010227;2.63e-12;1!UBERON:0004140;5.62e-12;1!UBERON:0005062;1.55e-11;4!UBERON:0007284;1.55e-11;4!CL:0000515;2.08e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;5.62e-12;1!DOID:3603;5.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,6.97e-12,1;DOID:3603,6.97e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.08e-13!79;UBERON:0007798!1.08e-13!79;UBERON:0001009!1.25e-13!113;UBERON:0001986!4.09e-12!18;UBERON:0004638!4.09e-12!18;UBERON:0004852!4.09e-12!18;UBERON:0000055!4.80e-12!69;UBERON:0004535!3.17e-11!110;UBERON:0001981!1.64e-09!60;UBERON:0007500!1.64e-09!60;UBERON:0004537!1.64e-09!60;UBERON:0006965!1.64e-09!60;UBERON:0000487!2.03e-09!22;UBERON:0006914!2.07e-09!25;UBERON:0004872!1.17e-08!84;UBERON:0003915!3.49e-08!9;UBERON:0004700!3.49e-08!9;UBERON:0001917!3.49e-08!9;UBERON:0000490!4.76e-08!138;UBERON:0003978!1.20e-07!3;UBERON:0009751!1.20e-07!3;UBERON:0000946!1.20e-07!3;UBERON:0002523!1.20e-07!3;UBERON:0005983!1.20e-07!3;UBERON:0002165!1.20e-07!3;UBERON:0002062!1.20e-07!3;UBERON:0007280!1.20e-07!3;UBERON:0003914!2.31e-07!118;UBERON:0007100!2.36e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;4.60e-15;3!UBERON:0000946;4.60e-15;3!UBERON:0002079;2.63e-12;1!UBERON:0001473;2.78e-12;8!UBERON:0004536;2.78e-12;8!UBERON:0006558;2.78e-12;8!UBERON:0002135;3.09e-12;1!UBERON:0007195;3.09e-12;1!UBERON:0002146;1.25e-11;1!UBERON:0005623;1.25e-11;1!UBERON:0007100;1.43e-10;25!UBERON:0002465;6.16e-10;10!UBERON:0000948;5.55e-08;22!UBERON:0002081;8.93e-07;2!UBERON:0002133;9.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,5.30e-15,3;UBERON:0009751,5.30e-15,3;UBERON:0000946,5.30e-15,3;UBERON:0002523,5.30e-15,3;UBERON:0005983,5.30e-15,3;UBERON:0002165,5.30e-15,3;UBERON:0002062,5.30e-15,3;UBERON:0007280,5.30e-15,3;UBERON:0002079,2.63e-12,1;UBERON:0001473,2.67e-12,8;UBERON:0004536,2.67e-12,8;UBERON:0006558,2.67e-12,8;UBERON:0002135,2.93e-12,1;UBERON:0007195,3.27e-12,1;UBERON:0002146,1.63e-11,1;UBERON:0005623,1.63e-11,1;UBERON:0002465,5.97e-10,10;UBERON:0007100,8.86e-10,27;UBERON:0001009,5.87e-08,112;UBERON:0000948,2.58e-07,24;UBERON:0005498,2.58e-07,24;UBERON:0004140,2.58e-07,24;UBERON:0009881,2.58e-07,24;UBERON:0004141,2.58e-07,24;UBERON:0003084,2.58e-07,24;UBERON:0007005,2.58e-07,24;UBERON:0004139,2.58e-07,24;UBERON:0004291,2.58e-07,24;UBERON:0004797,6.20e-07,7;UBERON:0000055,8.40e-07,68;UBERON:0002081,8.93e-07,2;UBERON:0010227,8.93e-07,2;UBERON:0002133,9.44e-07,2 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,1.19257444420023,0,0,0.56530794192401,0.838998872419812,0.550236083880135,0.835979866147242,0.775250277507987,0,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0.892997282840798,0,0.450445921933289,0,0,0.366403487860815,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0.469634776943287,1.29929802984966,2.31492756288305,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,2.46128221334885,0.205476322550383,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0.170093705276516,1.29549549661284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0.170453254832202,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.286822704408103,0.294747123039363,1.07001315444375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849523652246594,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35217969754956,0,0.622079175323615,0,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0.19871461170299,0,0,0,0,0,0,0.458146384663663,0,0,0,0,0.407712618220842,0.627617077873999,0,0,0,0,0,0,0,4.74780082162832,1.14580212005842,0.717873024576814,0.399358000997982,0.429226048136571,2.67805748930247,2.41860500952215,0,0,0,0,0.13480708770837,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,5.00286728461357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,2.80019435264208,0,0,3.78554694685953,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0,0,2.3244333569449,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.64260490969995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.504665699340316,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:92680096..92680111,- | |||
}} |
Revision as of 14:58, 10 September 2013
Short description: | p@chr10:92680096..92680111, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:92680096..92680111, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.38e-16 | 6 |
endothelial cell of lymphatic vessel | 3.38e-16 | 6 |
vascular lymphangioblast | 3.38e-16 | 6 |
skeletal muscle myoblast | 1.82e-11 | 4 |
endothelial cell of vascular tree | 3.98e-07 | 24 |
endothelial cell | 4.39e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
valve | 5.30e-15 | 3 |
cardiac mesenchyme | 5.30e-15 | 3 |
cardial valve | 5.30e-15 | 3 |
tunica intima | 5.30e-15 | 3 |
heart layer | 5.30e-15 | 3 |
endocardium | 5.30e-15 | 3 |
endocardial cushion | 5.30e-15 | 3 |
presumptive endocardium | 5.30e-15 | 3 |
left cardiac atrium | 2.63e-12 | 1 |
lymphatic vessel | 2.67e-12 | 8 |
lymph vasculature | 2.67e-12 | 8 |
lymphatic part of lymphoid system | 2.67e-12 | 8 |
mitral valve | 2.93e-12 | 1 |
stroma of bone marrow | 3.27e-12 | 1 |
pulmonary valve | 1.63e-11 | 1 |
semi-lunar valve | 1.63e-11 | 1 |
lymphoid system | 5.97e-10 | 10 |
primary circulatory organ | 8.86e-10 | 27 |
circulatory system | 5.87e-08 | 112 |
heart | 2.58e-07 | 24 |
primitive heart tube | 2.58e-07 | 24 |
primary heart field | 2.58e-07 | 24 |
anterior lateral plate mesoderm | 2.58e-07 | 24 |
heart tube | 2.58e-07 | 24 |
heart primordium | 2.58e-07 | 24 |
cardiac mesoderm | 2.58e-07 | 24 |
cardiogenic plate | 2.58e-07 | 24 |
heart rudiment | 2.58e-07 | 24 |
blood vessel layer | 6.20e-07 | 7 |
vessel | 8.40e-07 | 68 |
cardiac atrium | 8.93e-07 | 2 |
future cardiac atrium | 8.93e-07 | 2 |
atrioventricular valve | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 6.97e-12 | 1 |
mucinous cystadenocarcinoma | 6.97e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.