FFCP PHASE1:Hg19::chr10:94520472..94520480,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:94520472..94520480,-|id=chr10:94520472..94520480,-|ontology_enrichment_celltype=CL:0002057!4.68e-40!42;CL:0000860!1.48e-39!45;CL:0000766!8.53e-27!76;CL:0002194!3.09e-25!63;CL:0000576!3.09e-25!63;CL:0000040!3.09e-25!63;CL:0000559!3.09e-25!63;CL:0002009!3.26e-24!65;CL:0000839!6.48e-22!70;CL:0000763!1.39e-21!112;CL:0000049!1.39e-21!112;CL:0000557!1.71e-21!71;CL:0002032!3.38e-14!165;CL:0000837!3.38e-14!165;CL:0000738!2.45e-13!140;CL:0000037!3.45e-13!172;CL:0000566!3.45e-13!172;CL:0002087!1.14e-12!119;CL:0000988!6.86e-12!182;CL:0002031!7.93e-12!124;CL:0000048!5.36e-07!430|ontology_enrichment_celltype_v019=CL:0000860;2.33e-31;33!CL:0002057;2.33e-31;33!CL:0000473;8.75e-20;39!CL:0000234;8.75e-20;39!CL:0000576;6.66e-15;48!CL:0000766;1.06e-11;69!CL:0002543;3.35e-07;6!CL:0000763;7.30e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,4.08e-26,42;CL:0002057,4.08e-26,42;CL:0000473,1.20e-22,48;CL:0000234,1.20e-22,48;CL:0000766,3.31e-20,72;CL:0002194,8.68e-18,59;CL:0000576,8.68e-18,59;CL:0000040,8.68e-18,59;CL:0000559,8.68e-18,59;CL:0002009,3.68e-17,61;CL:0000839,9.37e-16,66;CL:0000557,1.69e-15,67;CL:0000763,7.57e-13,108;CL:0000049,7.57e-13,108;CL:0000738,1.81e-11,136;CL:0002087,4.92e-10,115;CL:0002031,1.53e-09,120;CL:0002032,2.42e-09,161;CL:0000837,2.42e-09,161;CL:0000037,7.35e-09,168;CL:0000988,2.70e-08,177;CL:0002543,2.53e-07,6|ontology_enrichment_development_v019=CL:0002057;7.08e-18;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;9.04e-11;1!DOID:0070004;9.04e-11;1|ontology_enrichment_disease_v019_2=DOID:4960,1.77e-10,1;DOID:0070004,1.77e-10,1|ontology_enrichment_uberon=UBERON:0002390!1.96e-20!102;UBERON:0003061!1.96e-20!102;UBERON:0002371!8.66e-20!80;UBERON:0003081!2.94e-18!216;UBERON:0001474!7.74e-18!86;UBERON:0002193!9.36e-18!112;UBERON:0004765!1.99e-16!101;UBERON:0001434!1.99e-16!101;UBERON:0002204!1.14e-13!167;UBERON:0002405!2.95e-12!115;UBERON:0000926!3.41e-07!448;UBERON:0004120!3.41e-07!448;UBERON:0006603!3.41e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.40e-16,76;UBERON:0001474,8.77e-15,82;UBERON:0002390,2.77e-14,98;UBERON:0003061,2.77e-14,98;UBERON:0004765,2.57e-13,90;UBERON:0002405,7.85e-13,93;UBERON:0002193,8.82e-13,108;UBERON:0001434,8.25e-12,100;UBERON:0003081,7.37e-11,203;UBERON:0002204,1.53e-07,167;UBERON:0000926,5.62e-07,315;UBERON:0004120,5.62e-07,315;UBERON:0006603,5.62e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0,0.232429036905685,0.411167888021826,0.619412741790207,1.1507695692886,1.2808035326455,0.945928919554341,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.449446968890169,2.44867113896722,3.20929027076094,0.639337125799041,0,1.59570926097305,1.70489900213078,8.9964863974861,0,1.86846674698672,0.502497330513487,0,0.868755378820466,6.65939452896706,8.47038562771399,12.3420331101945,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,1.89853131913626,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0.36807447515742,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164230914106418,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:94520472..94520480,- | |||
|id=chr10:94520472..94520480,- | |||
|ontology_enrichment_celltype=CL:0002057!4.68e-40!42;CL:0000860!1.48e-39!45;CL:0000766!8.53e-27!76;CL:0002194!3.09e-25!63;CL:0000576!3.09e-25!63;CL:0000040!3.09e-25!63;CL:0000559!3.09e-25!63;CL:0002009!3.26e-24!65;CL:0000839!6.48e-22!70;CL:0000763!1.39e-21!112;CL:0000049!1.39e-21!112;CL:0000557!1.71e-21!71;CL:0002032!3.38e-14!165;CL:0000837!3.38e-14!165;CL:0000738!2.45e-13!140;CL:0000037!3.45e-13!172;CL:0000566!3.45e-13!172;CL:0002087!1.14e-12!119;CL:0000988!6.86e-12!182;CL:0002031!7.93e-12!124;CL:0000048!5.36e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.33e-31;33!CL:0002057;2.33e-31;33!CL:0000473;8.75e-20;39!CL:0000234;8.75e-20;39!CL:0000576;6.66e-15;48!CL:0000766;1.06e-11;69!CL:0002543;3.35e-07;6!CL:0000763;7.30e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.08e-26,42;CL:0002057,4.08e-26,42;CL:0000473,1.20e-22,48;CL:0000234,1.20e-22,48;CL:0000766,3.31e-20,72;CL:0002194,8.68e-18,59;CL:0000576,8.68e-18,59;CL:0000040,8.68e-18,59;CL:0000559,8.68e-18,59;CL:0002009,3.68e-17,61;CL:0000839,9.37e-16,66;CL:0000557,1.69e-15,67;CL:0000763,7.57e-13,108;CL:0000049,7.57e-13,108;CL:0000738,1.81e-11,136;CL:0002087,4.92e-10,115;CL:0002031,1.53e-09,120;CL:0002032,2.42e-09,161;CL:0000837,2.42e-09,161;CL:0000037,7.35e-09,168;CL:0000988,2.70e-08,177;CL:0002543,2.53e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;7.08e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;9.04e-11;1!DOID:0070004;9.04e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.77e-10,1;DOID:0070004,1.77e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.96e-20!102;UBERON:0003061!1.96e-20!102;UBERON:0002371!8.66e-20!80;UBERON:0003081!2.94e-18!216;UBERON:0001474!7.74e-18!86;UBERON:0002193!9.36e-18!112;UBERON:0004765!1.99e-16!101;UBERON:0001434!1.99e-16!101;UBERON:0002204!1.14e-13!167;UBERON:0002405!2.95e-12!115;UBERON:0000926!3.41e-07!448;UBERON:0004120!3.41e-07!448;UBERON:0006603!3.41e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.40e-16,76;UBERON:0001474,8.77e-15,82;UBERON:0002390,2.77e-14,98;UBERON:0003061,2.77e-14,98;UBERON:0004765,2.57e-13,90;UBERON:0002405,7.85e-13,93;UBERON:0002193,8.82e-13,108;UBERON:0001434,8.25e-12,100;UBERON:0003081,7.37e-11,203;UBERON:0002204,1.53e-07,167;UBERON:0000926,5.62e-07,315;UBERON:0004120,5.62e-07,315;UBERON:0006603,5.62e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0,0.232429036905685,0.411167888021826,0.619412741790207,1.1507695692886,1.2808035326455,0.945928919554341,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.449446968890169,2.44867113896722,3.20929027076094,0.639337125799041,0,1.59570926097305,1.70489900213078,8.9964863974861,0,1.86846674698672,0.502497330513487,0,0.868755378820466,6.65939452896706,8.47038562771399,12.3420331101945,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,1.89853131913626,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0.36807447515742,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:94520472..94520480,- | |||
}} |
Revision as of 15:01, 10 September 2013
Short description: | p@chr10:94520472..94520480, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:94520472..94520480, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.08e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.08e-26 | 42 |
defensive cell | 1.20e-22 | 48 |
phagocyte | 1.20e-22 | 48 |
myeloid leukocyte | 3.31e-20 | 72 |
monopoietic cell | 8.68e-18 | 59 |
monocyte | 8.68e-18 | 59 |
monoblast | 8.68e-18 | 59 |
promonocyte | 8.68e-18 | 59 |
macrophage dendritic cell progenitor | 3.68e-17 | 61 |
myeloid lineage restricted progenitor cell | 9.37e-16 | 66 |
granulocyte monocyte progenitor cell | 1.69e-15 | 67 |
myeloid cell | 7.57e-13 | 108 |
common myeloid progenitor | 7.57e-13 | 108 |
leukocyte | 1.81e-11 | 136 |
nongranular leukocyte | 4.92e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.53e-09 | 120 |
hematopoietic oligopotent progenitor cell | 2.42e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.42e-09 | 161 |
hematopoietic stem cell | 7.35e-09 | 168 |
hematopoietic cell | 2.70e-08 | 177 |
vein endothelial cell | 2.53e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.40e-16 | 76 |
bone element | 8.77e-15 | 82 |
hematopoietic system | 2.77e-14 | 98 |
blood island | 2.77e-14 | 98 |
skeletal element | 2.57e-13 | 90 |
immune system | 7.85e-13 | 93 |
hemolymphoid system | 8.82e-13 | 108 |
skeletal system | 8.25e-12 | 100 |
lateral plate mesoderm | 7.37e-11 | 203 |
musculoskeletal system | 1.53e-07 | 167 |
mesoderm | 5.62e-07 | 315 |
mesoderm-derived structure | 5.62e-07 | 315 |
presumptive mesoderm | 5.62e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.77e-10 | 1 |
myeloma | 1.77e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.