FFCP PHASE1:Hg19::chr11:105480958..105480979,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2893|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4574|TSSclassifier=S|UniProt=E9PJZ5|association_with_transcript=-13bp_to_ENST00000525921_5end|coexpression_cluster_id=C1328|description=CAGE_peak_7_at_GRIA4_5end|id=chr11:105480958..105480979,+|ontology_enrichment_celltype=CL:0000064!2.39e-07!3;CL:0005012!2.39e-07!3;CL:0000067!2.39e-07!3;CL:0002304!2.39e-07!3;CL:0000047!2.48e-07!8|ontology_enrichment_celltype_v019=CL:0000333;2.76e-07;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;6.81e-25;3!UBERON:0006601;1.72e-12;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;7.95e-10;1!DOID:4549;7.95e-10;1!DOID:5861;7.95e-10;1!DOID:6496;7.95e-10;1|ontology_enrichment_disease_v019_2=DOID:3371,7.98e-10,1;DOID:4549,7.98e-10,1;DOID:5861,7.98e-10,1;DOID:6496,7.98e-10,1|ontology_enrichment_uberon=UBERON:0001049!6.63e-83!57;UBERON:0005068!6.63e-83!57;UBERON:0006241!6.63e-83!57;UBERON:0007135!6.63e-83!57;UBERON:0001017!3.09e-76!82;UBERON:0000073!3.61e-75!94;UBERON:0001016!3.61e-75!94;UBERON:0005743!7.62e-75!86;UBERON:0003075!1.26e-71!86;UBERON:0007284!1.26e-71!86;UBERON:0002616!9.91e-69!59;UBERON:0002346!8.42e-68!90;UBERON:0000955!2.63e-62!69;UBERON:0006238!2.63e-62!69;UBERON:0002780!1.61e-58!41;UBERON:0001890!1.61e-58!41;UBERON:0006240!1.61e-58!41;UBERON:0003080!6.43e-57!42;UBERON:0002020!5.38e-56!34;UBERON:0003528!5.38e-56!34;UBERON:0001893!9.57e-56!34;UBERON:0002791!2.09e-53!33;UBERON:0001869!8.79e-52!32;UBERON:0003056!1.32e-51!61;UBERON:0004121!2.28e-46!169;UBERON:0000924!6.34e-45!173;UBERON:0006601!6.34e-45!173;UBERON:0002619!2.93e-42!22;UBERON:0000033!2.35e-41!123;UBERON:0000153!8.70e-39!129;UBERON:0007811!8.70e-39!129;UBERON:0001950!4.52e-38!20;UBERON:0007023!4.26e-37!115;UBERON:0000956!1.18e-36!25;UBERON:0000203!1.18e-36!25;UBERON:0003076!4.17e-26!15;UBERON:0003057!4.17e-26!15;UBERON:0002308!4.48e-21!9;UBERON:0000125!4.48e-21!9;UBERON:0002420!8.14e-21!9;UBERON:0007245!8.14e-21!9;UBERON:0010009!8.14e-21!9;UBERON:0010011!8.14e-21!9;UBERON:0000454!8.14e-21!9;UBERON:0004733!1.10e-19!12;UBERON:0002028!1.10e-19!12;UBERON:0007277!1.10e-19!12;UBERON:0000025!3.56e-18!194;UBERON:0004732!5.52e-18!13;UBERON:0009663!1.85e-16!7;UBERON:0002298!7.74e-15!8;UBERON:0000200!7.85e-15!6;UBERON:0001871!2.10e-14!7;UBERON:0000064!2.40e-14!219;UBERON:0000483!1.26e-13!309;UBERON:0000119!2.37e-13!312;UBERON:0002680!2.47e-13!9;UBERON:0001895!2.47e-13!9;UBERON:0010092!2.47e-13!9;UBERON:0000349!2.16e-12!5;UBERON:0002021!3.09e-12!5;UBERON:0004111!3.86e-12!241;UBERON:0000369!6.24e-11!4;UBERON:0002435!6.24e-11!4;UBERON:0000204!6.24e-11!4;UBERON:0010082!6.24e-11!4;UBERON:0000477!8.62e-11!286;UBERON:0000475!2.58e-09!365;UBERON:0005383!1.00e-08!3;UBERON:0005382!1.00e-08!3;UBERON:0000988!1.08e-08!3;UBERON:0001896!2.71e-08!3;UBERON:0005290!2.71e-08!3;UBERON:0010096!2.71e-08!3;UBERON:0002240!3.14e-08!3;UBERON:0001872!3.33e-08!5;UBERON:0006331!3.72e-08!3;UBERON:0002771!4.31e-08!3;UBERON:0000922!1.86e-07!612;UBERON:0001778!2.39e-07!3;UBERON:0001775!2.39e-07!3;UBERON:0002037!5.61e-07!6;UBERON:0006215!5.61e-07!6;UBERON:0000481!6.55e-07!347|ontology_enrichment_uberon_v019=UBERON:0004733;7.34e-32;12!UBERON:0002028;7.34e-32;12!UBERON:0004732;2.32e-29;13!UBERON:0002680;3.42e-22;9!UBERON:0001895;3.42e-22;9!UBERON:0002298;2.08e-21;6!UBERON:0001017;2.17e-20;75!UBERON:0000955;8.07e-19;68!UBERON:0000073;9.48e-19;53!UBERON:0002616;9.48e-19;53!UBERON:0001869;1.95e-16;32!UBERON:0001893;4.41e-16;34!UBERON:0001016;3.16e-15;83!UBERON:0003528;1.14e-13;34!UBERON:0002020;1.14e-13;34!UBERON:0002791;1.83e-13;32!UBERON:0001950;3.61e-13;20!UBERON:0002037;9.50e-13;6!UBERON:0002619;5.52e-12;22!UBERON:0005383;7.28e-12;3!UBERON:0005382;7.28e-12;3!UBERON:0000988;1.43e-11;3!UBERON:0001896;1.43e-11;3!UBERON:0005290;1.43e-11;3!UBERON:0000956;1.51e-10;25!UBERON:0000203;1.51e-10;25!UBERON:0001874;9.41e-10;1!UBERON:0002780;1.58e-09;41!UBERON:0001890;1.58e-09;41!UBERON:0002022;2.65e-09;1!UBERON:0007190;2.65e-09;1!UBERON:0000369;4.07e-09;4!UBERON:0002435;4.07e-09;4!UBERON:0000204;4.07e-09;4!UBERON:0000125;1.18e-08;9!UBERON:0002308;1.18e-08;9!UBERON:0007023;2.28e-07;114!UBERON:0002021;2.76e-07;5!UBERON:0000013;2.76e-07;5!UBERON:0002410;2.76e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.67e-42,89;UBERON:0001017,8.53e-39,81;UBERON:0000073,6.62e-35,53;UBERON:0002616,6.62e-35,53;UBERON:0000955,1.06e-33,68;UBERON:0006238,1.06e-33,68;UBERON:0001049,6.38e-33,56;UBERON:0005068,6.38e-33,56;UBERON:0006241,6.38e-33,56;UBERON:0007135,6.38e-33,56;UBERON:0004733,1.23e-31,12;UBERON:0002028,1.23e-31,12;UBERON:0007277,1.23e-31,12;UBERON:0004732,3.75e-29,13;UBERON:0003076,3.54e-25,15;UBERON:0003057,3.54e-25,15;UBERON:0002680,3.29e-22,9;UBERON:0001895,3.29e-22,9;UBERON:0010092,3.29e-22,9;UBERON:0003075,1.00e-21,82;UBERON:0007284,1.00e-21,82;UBERON:0002298,2.72e-21,6;UBERON:0002346,1.35e-20,86;UBERON:0004121,1.37e-20,171;UBERON:0000924,1.37e-20,171;UBERON:0006601,1.37e-2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2893 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4574 | |||
|TSSclassifier=S | |||
|UniProt=E9PJZ5 | |||
|association_with_transcript=-13bp_to_ENST00000525921_5end | |||
|coexpression_cluster_id=C1328 | |||
|description=CAGE_peak_7_at_GRIA4_5end | |||
|id=chr11:105480958..105480979,+ | |||
|ontology_enrichment_celltype=CL:0000064!2.39e-07!3;CL:0005012!2.39e-07!3;CL:0000067!2.39e-07!3;CL:0002304!2.39e-07!3;CL:0000047!2.48e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.76e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.81e-25;3!UBERON:0006601;1.72e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.95e-10;1!DOID:4549;7.95e-10;1!DOID:5861;7.95e-10;1!DOID:6496;7.95e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.98e-10,1;DOID:4549,7.98e-10,1;DOID:5861,7.98e-10,1;DOID:6496,7.98e-10,1 | |||
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|short_description=p7@GRIA4 | |||
}} |
Revision as of 15:29, 10 September 2013
Short description: | p7@GRIA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_GRIA4_5end |
Coexpression cluster: | C1328_extraskeletal_cerebellum_brain_duodenum_occipital_parietal_temporal |
Association with transcript: | -13bp_to_ENST00000525921_5end |
EntrezGene: | GRIA4 |
HGNC: | 4574 |
UniProt: | E9PJZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.98e-10 | 1 |
extraosseous chondrosarcoma | 7.98e-10 | 1 |
myxoid chondrosarcoma | 7.98e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 7.98e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.