FFCP PHASE1:Hg19::chr14:21270995..21271013,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6035|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10044|TSSclassifier=S|UniProt=P07998,G3V357|association_with_transcript=0bp_to_ENST00000340900,ENST00000397970,ENST00000555698_5end|coexpression_cluster_id=C67|description=CAGE_peak_1_at_RNASE1_5end|id=chr14:21270995..21271013,-|ontology_enrichment_celltype=CL:0000115!1.20e-14!35;CL:0002139!3.08e-11!24;CL:0002078!7.66e-11!44;CL:0000071!5.90e-09!18;CL:0002546!5.90e-09!18|ontology_enrichment_celltype_v019=CL:0000115;3.08e-15;36!CL:0002139;7.57e-13;24!CL:0000071;3.48e-10;18!CL:0002078;4.14e-09;45!CL:0000235;9.71e-07;6|ontology_enrichment_celltype_v019_2=CL:0000115,1.06e-17,36;CL:0002078,2.98e-13,45;CL:0002139,7.74e-13,24;CL:0000071,3.52e-10,18;CL:0002546,3.52e-10,18;CL:0000213,8.81e-09,58;CL:0000215,8.81e-09,58;CL:0000235,9.72e-07,6|ontology_enrichment_development_v019=CL:0002546;3.48e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.83e-52!115;UBERON:0001049!6.93e-18!57;UBERON:0005068!6.93e-18!57;UBERON:0006241!6.93e-18!57;UBERON:0007135!6.93e-18!57;UBERON:0000025!7.76e-18!194;UBERON:0004111!4.46e-17!241;UBERON:0003080!3.04e-15!42;UBERON:0002780!1.37e-14!41;UBERON:0001890!1.37e-14!41;UBERON:0006240!1.37e-14!41;UBERON:0002616!1.39e-14!59;UBERON:0005743!2.63e-14!86;UBERON:0001017!9.52e-14!82;UBERON:0000468!1.13e-12!659;UBERON:0000467!1.88e-12!625;UBERON:0000480!2.85e-12!626;UBERON:0000477!5.91e-12!286;UBERON:0000955!6.05e-12!69;UBERON:0006238!6.05e-12!69;UBERON:0001893!6.47e-12!34;UBERON:0003075!9.87e-12!86;UBERON:0007284!9.87e-12!86;UBERON:0002020!1.23e-11!34;UBERON:0003528!1.23e-11!34;UBERON:0002791!1.94e-11!33;UBERON:0000073!2.10e-11!94;UBERON:0001016!2.10e-11!94;UBERON:0000922!5.08e-11!612;UBERON:0001869!6.58e-11!32;UBERON:0000062!1.64e-10!511;UBERON:0002619!2.12e-10!22;UBERON:0002346!3.28e-10!90;UBERON:0001950!1.18e-09!20;UBERON:0002050!2.18e-09!605;UBERON:0005423!2.18e-09!605;UBERON:0000923!4.38e-09!604;UBERON:0005291!4.38e-09!604;UBERON:0006598!4.38e-09!604;UBERON:0002532!4.38e-09!604;UBERON:0001986!5.90e-09!18;UBERON:0004638!5.90e-09!18;UBERON:0004852!5.90e-09!18;UBERON:0003056!3.84e-08!61;UBERON:0000956!4.51e-08!25;UBERON:0000203!4.51e-08!25;UBERON:0003081!7.82e-08!216;UBERON:0000487!2.01e-07!22|ontology_enrichment_uberon_v019=UBERON:0007023;9.73e-17;114!UBERON:0002780;9.16e-13;41!UBERON:0001890;9.16e-13;41!UBERON:0001893;5.57e-12;34!UBERON:0002619;7.47e-12;22!UBERON:0003528;1.11e-11;34!UBERON:0002020;1.11e-11;34!UBERON:0001869;1.28e-11;32!UBERON:0002791;1.51e-11;32!UBERON:0000073;2.75e-11;53!UBERON:0002616;2.75e-11;53!UBERON:0001950;5.52e-11;20!UBERON:0004638;3.48e-10;18!UBERON:0001986;3.48e-10;18!UBERON:0004852;3.48e-10;18!UBERON:0000956;1.56e-09;25!UBERON:0000203;1.56e-09;25!UBERON:0000487;3.55e-08;22!UBERON:0006914;4.27e-07;25!UBERON:0001017;5.31e-07;75!UBERON:0000955;7.81e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.75e-61,114;UBERON:0001049,1.16e-20,56;UBERON:0005068,1.16e-20,56;UBERON:0006241,1.16e-20,56;UBERON:0007135,1.16e-20,56;UBERON:0000073,3.36e-19,53;UBERON:0002616,3.36e-19,53;UBERON:0002780,3.53e-17,41;UBERON:0001890,3.53e-17,41;UBERON:0003080,3.53e-17,41;UBERON:0006240,3.53e-17,41;UBERON:0000025,3.60e-17,192;UBERON:0004111,2.89e-16,240;UBERON:0001017,3.02e-15,81;UBERON:0003075,1.29e-14,82;UBERON:0007284,1.29e-14,82;UBERON:0001893,4.76e-14,34;UBERON:0003528,1.02e-13,34;UBERON:0002020,1.02e-13,34;UBERON:0000955,2.01e-13,68;UBERON:0006238,2.01e-13,68;UBERON:0002346,4.97e-13,86;UBERON:0001869,7.25e-13,32;UBERON:0002791,8.67e-13,32;UBERON:0001016,1.32e-12,89;UBERON:0002619,7.32e-12,22;UBERON:0000922,2.33e-11,592;UBERON:0000923,4.00e-11,560;UBERON:0010316,4.00e-11,560;UBERON:0005291,4.00e-11,560;UBERON:0006598,4.00e-11,560;UBERON:0010317,4.00e-11,560;UBERON:0002532,4.00e-11,560;UBERON:0002050,4.52e-11,564;UBERON:0001950,5.42e-11,20;UBERON:0010314,1.14e-10,132;UBERON:0004638,3.52e-10,18;UBERON:0001986,3.52e-10,18;UBERON:0004852,3.52e-10,18;UBERON:0005423,4.00e-10,581;UBERON:0003056,6.30e-10,61;UBERON:0000956,1.53e-09,25;UBERON:0000203,1.53e-09,25;UBERON:0011216,2.23e-09,223;UBERON:0010371,8.27e-09,104;UBERON:0000487,3.58e-08,22;UBERON:0006914,4.34e-07,25;UBERON:0003081,6.93e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,50.6211909193108,139.560233594486,1.31064823278103,3.69273769519835,0,0,41.6841590800101,0,0,0,0,0,0,0,0,0,0,0,0,7.86728553697808,0.383829398097213,2.01260960310899,0,0,0,0,0,0.293600439334847,2.76997704265939,0.401088894940283,0.651032612147555,8526.25342810784,7449.87821210255,13900.5806585141,31.5514178151655,3.02300754951048,2.42584061187816,7.20530014407622,0.822335776043652,0.309706370895104,4.31538588483226,0.512321413058201,0.709446689665756,1.03423704220986,0,1.35426486594342,12.8004790888971,3.27487380069415,2.9214052977861,5.81559395504715,1.28371610830437,0,4.28806690242731,1.59570926097305,0.426224750532694,1.7412554317715,0.56738522469114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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10044 | |||
|TSSclassifier=S | |||
|UniProt=P07998,G3V357 | |||
|association_with_transcript=0bp_to_ENST00000340900,ENST00000397970,ENST00000555698_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_RNASE1_5end | |||
|id=chr14:21270995..21271013,- | |||
|ontology_enrichment_celltype=CL:0000115!1.20e-14!35;CL:0002139!3.08e-11!24;CL:0002078!7.66e-11!44;CL:0000071!5.90e-09!18;CL:0002546!5.90e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.08e-15;36!CL:0002139;7.57e-13;24!CL:0000071;3.48e-10;18!CL:0002078;4.14e-09;45!CL:0000235;9.71e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.06e-17,36;CL:0002078,2.98e-13,45;CL:0002139,7.74e-13,24;CL:0000071,3.52e-10,18;CL:0002546,3.52e-10,18;CL:0000213,8.81e-09,58;CL:0000215,8.81e-09,58;CL:0000235,9.72e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.48e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@RNASE1 | |||
}} |
Revision as of 03:41, 11 September 2013
Short description: | p1@RNASE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RNASE1_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000340900, ENST00000397970, ENST00000555698_5end |
EntrezGene: | RNASE1 |
HGNC: | 10044 |
UniProt: | P07998G3V357 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.06e-17 | 36 |
meso-epithelial cell | 2.98e-13 | 45 |
endothelial cell of vascular tree | 7.74e-13 | 24 |
blood vessel endothelial cell | 3.52e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.52e-10 | 18 |
lining cell | 8.81e-09 | 58 |
barrier cell | 8.81e-09 | 58 |
macrophage | 9.72e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.