FFCP PHASE1:Hg19::chr15:71228957..71228972,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54839|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25965|TSSclassifier=S|UniProt=|association_with_transcript=2bp_to_ENST00000559685_5end|coexpression_cluster_id=C24|description=CAGE_peak_11_at_LRRC49_5end|id=chr15:71228957..71228972,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002253;2.28e-07;2|ontology_enrichment_celltype_v019_2=CL:0002253,2.28e-07,2|ontology_enrichment_development_v019=UBERON:0010227;3.33e-13;1!UBERON:0006222;4.23e-13;1!UBERON:0007297;3.48e-07;2!UBERON:0006601;5.06e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;4.69e-07;2|ontology_enrichment_disease_v019_2=DOID:114,4.42e-07,2|ontology_enrichment_uberon=UBERON:0001049!9.63e-74!57;UBERON:0005068!9.63e-74!57;UBERON:0006241!9.63e-74!57;UBERON:0007135!9.63e-74!57;UBERON:0005743!7.34e-62!86;UBERON:0001017!1.31e-61!82;UBERON:0007023!6.08e-60!115;UBERON:0003075!2.74e-59!86;UBERON:0007284!2.74e-59!86;UBERON:0002616!2.85e-58!59;UBERON:0002346!2.64e-56!90;UBERON:0000073!2.59e-55!94;UBERON:0001016!2.59e-55!94;UBERON:0000955!4.13e-55!69;UBERON:0006238!4.13e-55!69;UBERON:0002780!1.27e-49!41;UBERON:0001890!1.27e-49!41;UBERON:0006240!1.27e-49!41;UBERON:0003080!2.49e-48!42;UBERON:0002020!7.81e-37!34;UBERON:0003528!7.81e-37!34;UBERON:0001893!1.72e-36!34;UBERON:0001869!7.71e-35!32;UBERON:0003056!1.18e-34!61;UBERON:0002791!1.38e-33!33;UBERON:0000033!5.83e-32!123;UBERON:0002619!3.01e-31!22;UBERON:0000153!4.02e-30!129;UBERON:0007811!4.02e-30!129;UBERON:0001950!1.38e-29!20;UBERON:0004121!3.34e-29!169;UBERON:0000924!2.45e-28!173;UBERON:0006601!2.45e-28!173;UBERON:0000956!2.87e-27!25;UBERON:0000203!2.87e-27!25;UBERON:0003076!4.25e-26!15;UBERON:0003057!4.25e-26!15;UBERON:0000025!7.75e-25!194;UBERON:0004111!2.78e-18!241;UBERON:0000200!7.00e-17!6;UBERON:0004733!1.49e-16!12;UBERON:0002028!1.49e-16!12;UBERON:0007277!1.49e-16!12;UBERON:0000483!2.49e-16!309;UBERON:0000119!4.39e-16!312;UBERON:0001894!3.18e-15!7;UBERON:0006222!3.18e-15!7;UBERON:0004732!3.35e-15!13;UBERON:0000477!5.02e-15!286;UBERON:0000988!8.91e-14!3;UBERON:0002021!1.41e-13!5;UBERON:0002298!2.45e-13!8;UBERON:0002771!6.28e-13!3;UBERON:0002240!8.69e-13!3;UBERON:0002680!9.91e-12!9;UBERON:0001895!9.91e-12!9;UBERON:0010092!9.91e-12!9;UBERON:0002308!6.68e-11!9;UBERON:0000125!6.68e-11!9;UBERON:0000062!2.90e-10!511;UBERON:0001905!5.07e-10!2;UBERON:0002757!5.07e-10!2;UBERON:0010134!5.07e-10!2;UBERON:0002784!5.07e-10!2;UBERON:0005408!5.07e-10!2;UBERON:0001899!5.07e-10!2;UBERON:0002148!1.14e-09!2;UBERON:0009662!1.14e-09!2;UBERON:0000064!1.36e-09!219;UBERON:0001897!4.15e-09!2;UBERON:0000475!5.54e-09!365;UBERON:0002360!1.69e-08!2;UBERON:0000094!1.69e-08!2;UBERON:0007645!1.69e-08!2;UBERON:0001871!3.29e-08!7;UBERON:0001872!7.55e-08!5;UBERON:0005174!7.55e-08!5;UBERON:0001137!7.55e-08!5;UBERON:0000481!9.06e-08!347|ontology_enrichment_uberon_v019=UBERON:0000988;1.10e-35;3!UBERON:0002298;2.71e-31;6!UBERON:0002784;1.41e-27;4!UBERON:0001894;1.69e-27;7!UBERON:0001905;4.38e-25;2!UBERON:0002757;4.38e-25;2!UBERON:0010134;4.38e-25;2!UBERON:0005408;4.38e-25;2!UBERON:0001899;4.38e-25;2!UBERON:0002148;3.76e-24;2!UBERON:0006331;3.76e-24;2!UBERON:0009662;3.76e-24;2!UBERON:0004733;3.85e-24;12!UBERON:0002028;3.85e-24;12!UBERON:0004732;2.73e-22;13!UBERON:0002680;5.39e-21;9!UBERON:0001895;5.39e-21;9!UBERON:0002079;3.33e-13;1!UBERON:0001301;4.23e-13;1!UBERON:0003296;4.78e-13;4!UBERON:0010133;4.78e-13;4!UBERON:0002146;7.68e-13;1!UBERON:0005623;7.68e-13;1!UBERON:0000073;1.91e-12;53!UBERON:0002616;1.91e-12;53!UBERON:0000955;4.01e-08;68!UBERON:0007023;5.52e-08;114!UBERON:0007100;1.18e-07;25!UBERON:0001897;2.91e-07;2!UBERON:0010225;2.91e-07;2!UBERON:0002081;3.09e-07;2!UBERON:0002780;4.21e-07;41!UBERON:0001890;4.21e-07;41!UBERON:0002702;4.69e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000988,1.40e-35,3;UBERON:0002298,2.51e-31,6;UBERON:0002784,1.41e-27,4;UBERON:0001894,1.58e-27,7;UBERON:0006222,1.58e-27,7;UBERON:0001905,4.38e-25,2;UBERON:0002757,4.38e-25,2;UBERON:0010134,4.38e-25,2;UBERON:0005408,4.38e-25,2;UBERON:0001899,4.38e-25,2;UBERON:0000073,7.63e-25,53;UBERON:0002616,7.63e-25,53;UBERON:0002148,4.23e-24,2;UBERON:0006331,4.23e-24,2;UBERON:0009662,4.23e-24,2;UBERON:0004733,4.24e-24,12;UBERON:0002028,4.24e-24,12;UBERON:0007277,4.24e-24,12;UBERON:0001049,1.82e-23,56;UBERON:0005068,1.82e-23,56;UBERON:0006241,1.82e-23,56;UBERON:0007135,1.82e-23,56;UBERON:0004732,2.99e-22,13;UBERON:0007023,3.30e-21,114;UBERON:0002680,6.99e-21,9;UBERON:0001895,6.99e-21,9;UBERON:0010092,6.99e-21,9;UBERON:0003076,2.73e-19,15;UBERON:0003057,2.73e-19,15;UBERON:0000955,7.46e-19,68;UBERON:0006238,7.46e-19,68;UBERON:0003075,9.43e-19,82;UBERON:0007284,9.43e-19,82;UBERON:0002346,8.09e-18,86;UBERON:0001017,1.11e-15,81;UBERON:0010371,1.71e-14,104;UBERON:0001016,5.24e-14,89;UBERON:0002079,3.33e-13,1;UBERON:0010314,3.44e-13,132;UBERON:0001301,4.77e-13,1;UBERON:0003296,4.78e-13,4;UBERON:0010133,4.78e-13,4;UBERON:0002146,6.06e-13,1;UBERON:0005623,6.06e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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54839 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25965 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=2bp_to_ENST00000559685_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_11_at_LRRC49_5end | |||
|id=chr15:71228957..71228972,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;2.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.33e-13;1!UBERON:0006222;4.23e-13;1!UBERON:0007297;3.48e-07;2!UBERON:0006601;5.06e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.42e-07,2 | |||
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|short_description=p11@LRRC49 | |||
}} |
Revision as of 08:05, 11 September 2013
Short description: | p11@LRRC49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_LRRC49_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 2bp_to_ENST00000559685_5end |
EntrezGene: | LRRC49 |
HGNC: | 25965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.42e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.