FFCP PHASE1:Hg19::chr16:420514..420555,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10573 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14484 | |||
|TSSclassifier=S | |||
|UniProt=Q13084 | |||
|association_with_transcript=0bp_to_ENST00000199706,ENST00000481453,uc002cgs.1,uc002cgt.1_5end | |||
|coexpression_cluster_id=C534 | |||
|description=CAGE_peak_1_at_MRPL28_5end | |||
|id=chr16:420514..420555,- | |||
|ontology_enrichment_celltype=CL:0000222!9.33e-22!119;CL:0000220!8.93e-21!246;CL:0002321!3.95e-20!248;CL:0000066!5.03e-16!254;CL:0000183!2.91e-15!59;CL:0000548!1.22e-14!679;CL:0000004!1.22e-14!679;CL:0000255!1.22e-14!679;CL:0000012!2.17e-14!682;CL:0000187!6.37e-13!54;CL:0000680!2.31e-12!57;CL:0000056!2.31e-12!57;CL:0000355!2.31e-12!57;CL:0000192!1.68e-11!42;CL:0000514!1.68e-11!42;CL:0000393!4.09e-11!60;CL:0000211!4.09e-11!60;CL:0000055!2.81e-10!180;CL:0000213!1.22e-09!57;CL:0000215!1.22e-09!57;CL:0000144!1.17e-08!625;CL:0000359!1.60e-08!32;CL:0002371!3.77e-08!591;CL:0002078!6.86e-08!44;CL:1000449!4.33e-07!16;CL:0000076!4.99e-07!62;CL:0000115!8.69e-07!35;CL:1000497!9.47e-07!18;CL:0002518!9.47e-07!18 | |||
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|ontology_enrichment_development_v019=CL:0000514;2.85e-08;43!CL:0000355;6.21e-07;58!CL:0000222;9.72e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@MRPL28 | |||
}} |
Revision as of 10:24, 11 September 2013
Short description: | p1@MRPL28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MRPL28_5end |
Coexpression cluster: | C534_Mesenchymal_Alveolar_Renal_Placental_Fibroblast_Smooth_Tracheal |
Association with transcript: | 0bp_to_ENST00000199706, ENST00000481453, uc002cgs.1, uc002cgt.1_5end |
EntrezGene: | MRPL28 |
HGNC: | 14484 |
UniProt: | Q13084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.02e-22 | 121 |
embryonic cell | 1.64e-20 | 250 |
epithelial cell | 5.31e-16 | 253 |
muscle cell | 7.92e-13 | 55 |
muscle precursor cell | 2.78e-12 | 58 |
myoblast | 2.78e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.78e-12 | 58 |
smooth muscle cell | 2.19e-11 | 43 |
smooth muscle myoblast | 2.19e-11 | 43 |
electrically responsive cell | 4.69e-11 | 61 |
electrically active cell | 4.69e-11 | 61 |
lining cell | 5.25e-10 | 58 |
barrier cell | 5.25e-10 | 58 |
vascular associated smooth muscle cell | 1.60e-08 | 32 |
meso-epithelial cell | 2.97e-08 | 45 |
epithelial cell of nephron | 2.56e-07 | 15 |
endothelial cell | 3.75e-07 | 36 |
squamous epithelial cell | 3.78e-07 | 63 |
kidney cell | 6.29e-07 | 17 |
kidney epithelial cell | 6.29e-07 | 17 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.