FFCP PHASE1:Hg19::chr17:30814554..30814586,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8851|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1775|TSSclassifier=S|UniProt=|association_with_transcript=-51bp_to_uc010wca.1_5end|coexpression_cluster_id=C16|description=CAGE_peak_7_at_CDK5R1_5end|id=chr17:30814554..30814586,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000540;6.35e-08;6!CL:0000404;6.35e-08;6|ontology_enrichment_celltype_v019_2=CL:0000540,6.75e-08,6;CL:0000031,6.75e-08,6;CL:0000404,6.75e-08,6|ontology_enrichment_development_v019=UBERON:0006601;2.40e-12;82!CL:0000031;6.35e-08;6!UBERON:0006215;4.05e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.10e-49!82;UBERON:0005743!5.81e-48!86;UBERON:0001049!6.16e-47!57;UBERON:0005068!6.16e-47!57;UBERON:0006241!6.16e-47!57;UBERON:0007135!6.16e-47!57;UBERON:0000073!1.99e-44!94;UBERON:0001016!1.99e-44!94;UBERON:0000955!1.30e-42!69;UBERON:0006238!1.30e-42!69;UBERON:0002616!2.25e-40!59;UBERON:0002780!1.88e-37!41;UBERON:0001890!1.88e-37!41;UBERON:0006240!1.88e-37!41;UBERON:0001869!7.34e-37!32;UBERON:0002020!1.70e-36!34;UBERON:0003528!1.70e-36!34;UBERON:0001893!1.82e-36!34;UBERON:0003080!2.84e-36!42;UBERON:0002791!4.32e-35!33;UBERON:0002619!4.20e-31!22;UBERON:0000956!5.69e-31!25;UBERON:0000203!5.69e-31!25;UBERON:0002346!4.45e-30!90;UBERON:0000924!9.34e-30!173;UBERON:0006601!9.34e-30!173;UBERON:0003075!1.40e-29!86;UBERON:0007284!1.40e-29!86;UBERON:0004121!5.03e-29!169;UBERON:0001950!3.69e-28!20;UBERON:0000033!1.54e-23!123;UBERON:0000153!1.59e-22!129;UBERON:0007811!1.59e-22!129;UBERON:0003056!1.92e-22!61;UBERON:0007023!2.10e-19!115;UBERON:0003076!1.61e-11!15;UBERON:0003057!1.61e-11!15;UBERON:0004733!2.90e-10!12;UBERON:0002028!2.90e-10!12;UBERON:0007277!2.90e-10!12;UBERON:0001871!4.16e-10!7;UBERON:0000200!5.34e-10!6;UBERON:0002680!1.67e-09!9;UBERON:0001895!1.67e-09!9;UBERON:0010092!1.67e-09!9;UBERON:0004732!2.82e-09!13;UBERON:0000349!7.11e-09!5;UBERON:0002021!9.79e-09!5;UBERON:0001872!1.54e-08!5;UBERON:0000025!4.78e-08!194;UBERON:0002420!9.37e-08!9;UBERON:0007245!9.37e-08!9;UBERON:0010009!9.37e-08!9;UBERON:0010011!9.37e-08!9;UBERON:0000454!9.37e-08!9;UBERON:0002308!2.51e-07!9;UBERON:0000125!2.51e-07!9;UBERON:0004111!3.44e-07!241;UBERON:0000064!6.09e-07!219|ontology_enrichment_uberon_v019=UBERON:0002619;4.27e-92;22!UBERON:0001950;2.54e-82;20!UBERON:0000956;6.55e-81;25!UBERON:0000203;6.55e-81;25!UBERON:0001869;4.98e-78;32!UBERON:0002791;2.20e-72;32!UBERON:0001893;2.74e-72;34!UBERON:0003528;1.13e-70;34!UBERON:0002020;1.13e-70;34!UBERON:0002780;5.36e-49;41!UBERON:0001890;5.36e-49;41!UBERON:0000073;1.24e-35;53!UBERON:0002616;1.24e-35;53!UBERON:0000955;6.43e-30;68!UBERON:0001017;1.08e-27;75!UBERON:0001871;5.17e-26;6!UBERON:0000349;1.06e-25;5!UBERON:0002021;3.38e-25;5!UBERON:0001872;2.22e-24;5!UBERON:0001016;6.53e-22;83!UBERON:0000200;5.06e-21;6!UBERON:0002420;1.47e-13;9!UBERON:0007245;1.47e-13;9!UBERON:0010009;1.47e-13;9!UBERON:0010011;1.47e-13;9!UBERON:0000454;1.47e-13;9!UBERON:0001876;1.47e-11;2!UBERON:0001954;2.17e-11;2!UBERON:0003022;2.17e-11;2!UBERON:0002421;2.17e-11;2!UBERON:0002600;2.17e-11;2!UBERON:0002771;2.72e-11;2!UBERON:0000369;3.17e-11;4!UBERON:0002435;3.17e-11;4!UBERON:0000204;3.17e-11;4!UBERON:0011216;1.94e-10;132!UBERON:0007023;8.70e-10;114!UBERON:0000125;1.50e-08;9!UBERON:0002308;1.50e-08;9!UBERON:0001870;9.50e-08;3!UBERON:0005383;4.05e-07;3!UBERON:0005382;4.05e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.97e-92,22;UBERON:0001869,3.34e-89,32;UBERON:0001893,8.76e-84,34;UBERON:0003528,1.50e-83,34;UBERON:0002020,1.50e-83,34;UBERON:0001950,1.73e-82,20;UBERON:0002791,4.57e-82,32;UBERON:0000956,4.75e-81,25;UBERON:0000203,4.75e-81,25;UBERON:0001017,1.49e-70,81;UBERON:0002780,7.05e-69,41;UBERON:0001890,7.05e-69,41;UBERON:0003080,7.05e-69,41;UBERON:0006240,7.05e-69,41;UBERON:0001049,8.76e-67,56;UBERON:0005068,8.76e-67,56;UBERON:0006241,8.76e-67,56;UBERON:0007135,8.76e-67,56;UBERON:0000073,6.69e-66,53;UBERON:0002616,6.69e-66,53;UBERON:0001016,5.78e-63,89;UBERON:0000955,9.85e-62,68;UBERON:0006238,9.85e-62,68;UBERON:0003056,7.92e-45,61;UBERON:0003075,6.95e-44,82;UBERON:0007284,6.95e-44,82;UBERON:0002346,1.42e-41,86;UBERON:0010371,2.33e-33,104;UBERON:0007023,2.93e-30,114;UBERON:0004121,6.29e-30,171;UBERON:0000924,6.29e-30,171;UBERON:0006601,6.29e-30,171;UBERON:0010314,4.57e-27,132;UBERON:0001871,4.17e-26,6;UBERON:0000349,1.27e-25,5;UBERON:0002021,3.65e-25,5;UBERON:0001872,1.62e-24,5;UBERON:0011216,2.13e-24,223;UBERON:0000200,4.97e-21,6;UBERON:0000025,3.01e-15,192;UBERON:0002420,1.59e-13,9;UBERON:0007245,1.59e-13,9;UBERON:0010009,1.59e-13,9;UBERON:0010011,1.59e-13,9;UBERON:0000454,1.59e-13,9;UBERON:0001876,1.47e-11,2;UBERON:0001954,2.22e-11,2;UBERON:0003022,2.22e-11,2;UBERON:0002421,2.22e-11,2;UBERON:0002600,2.22e-11,2;UBERON:0002771,2.59e-11,2;UBERON:0000369,3.53e-11,4;UBERON:0002435,3.53e-11,4;UBERON:0000204,3.53e-11,4;UBERON:0010082,3.53e-11,4;UBERON:000411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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1775 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-51bp_to_uc010wca.1_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_7_at_CDK5R1_5end | |||
|id=chr17:30814554..30814586,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.35e-08;6!CL:0000404;6.35e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.75e-08,6;CL:0000031,6.75e-08,6;CL:0000404,6.75e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.40e-12;82!CL:0000031;6.35e-08;6!UBERON:0006215;4.05e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-49!82;UBERON:0005743!5.81e-48!86;UBERON:0001049!6.16e-47!57;UBERON:0005068!6.16e-47!57;UBERON:0006241!6.16e-47!57;UBERON:0007135!6.16e-47!57;UBERON:0000073!1.99e-44!94;UBERON:0001016!1.99e-44!94;UBERON:0000955!1.30e-42!69;UBERON:0006238!1.30e-42!69;UBERON:0002616!2.25e-40!59;UBERON:0002780!1.88e-37!41;UBERON:0001890!1.88e-37!41;UBERON:0006240!1.88e-37!41;UBERON:0001869!7.34e-37!32;UBERON:0002020!1.70e-36!34;UBERON:0003528!1.70e-36!34;UBERON:0001893!1.82e-36!34;UBERON:0003080!2.84e-36!42;UBERON:0002791!4.32e-35!33;UBERON:0002619!4.20e-31!22;UBERON:0000956!5.69e-31!25;UBERON:0000203!5.69e-31!25;UBERON:0002346!4.45e-30!90;UBERON:0000924!9.34e-30!173;UBERON:0006601!9.34e-30!173;UBERON:0003075!1.40e-29!86;UBERON:0007284!1.40e-29!86;UBERON:0004121!5.03e-29!169;UBERON:0001950!3.69e-28!20;UBERON:0000033!1.54e-23!123;UBERON:0000153!1.59e-22!129;UBERON:0007811!1.59e-22!129;UBERON:0003056!1.92e-22!61;UBERON:0007023!2.10e-19!115;UBERON:0003076!1.61e-11!15;UBERON:0003057!1.61e-11!15;UBERON:0004733!2.90e-10!12;UBERON:0002028!2.90e-10!12;UBERON:0007277!2.90e-10!12;UBERON:0001871!4.16e-10!7;UBERON:0000200!5.34e-10!6;UBERON:0002680!1.67e-09!9;UBERON:0001895!1.67e-09!9;UBERON:0010092!1.67e-09!9;UBERON:0004732!2.82e-09!13;UBERON:0000349!7.11e-09!5;UBERON:0002021!9.79e-09!5;UBERON:0001872!1.54e-08!5;UBERON:0000025!4.78e-08!194;UBERON:0002420!9.37e-08!9;UBERON:0007245!9.37e-08!9;UBERON:0010009!9.37e-08!9;UBERON:0010011!9.37e-08!9;UBERON:0000454!9.37e-08!9;UBERON:0002308!2.51e-07!9;UBERON:0000125!2.51e-07!9;UBERON:0004111!3.44e-07!241;UBERON:0000064!6.09e-07!219 | |||
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|short_description=p7@CDK5R1 | |||
}} |
Revision as of 12:58, 11 September 2013
Short description: | p7@CDK5R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_CDK5R1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -51bp_to_uc010wca.1_5end |
EntrezGene: | CDK5R1 |
HGNC: | 1775 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.75e-08 | 6 |
neuroblast | 6.75e-08 | 6 |
electrically signaling cell | 6.75e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.