FFCP PHASE1:Hg19::chr17:48912918..48912925,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=124857|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30916|TSSclassifier=S|UniProt=Q8TEU8|association_with_transcript=147bp_to_ENST00000311378_5end|coexpression_cluster_id=C160|description=CAGE_peak_3_at_WFIKKN2_5end|id=chr17:48912918..48912925,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;6.31e-21;1!UBERON:0006238;3.69e-08;10!UBERON:0003056;7.26e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.92e-32!94;UBERON:0001016!9.92e-32!94;UBERON:0005743!1.07e-29!86;UBERON:0001017!1.55e-28!82;UBERON:0001049!1.07e-25!57;UBERON:0005068!1.07e-25!57;UBERON:0006241!1.07e-25!57;UBERON:0007135!1.07e-25!57;UBERON:0000955!7.27e-23!69;UBERON:0006238!7.27e-23!69;UBERON:0003075!4.60e-20!86;UBERON:0007284!4.60e-20!86;UBERON:0007023!2.60e-19!115;UBERON:0002616!3.77e-19!59;UBERON:0002346!5.49e-19!90;UBERON:0001896!1.26e-17!3;UBERON:0005290!1.26e-17!3;UBERON:0010096!1.26e-17!3;UBERON:0002298!4.98e-17!8;UBERON:0003076!6.15e-17!15;UBERON:0003057!6.15e-17!15;UBERON:0004121!1.92e-15!169;UBERON:0000924!5.76e-15!173;UBERON:0006601!5.76e-15!173;UBERON:0004732!1.09e-14!13;UBERON:0000153!3.12e-13!129;UBERON:0007811!3.12e-13!129;UBERON:0002780!5.11e-13!41;UBERON:0001890!5.11e-13!41;UBERON:0006240!5.11e-13!41;UBERON:0003080!1.15e-12!42;UBERON:0000033!1.26e-12!123;UBERON:0005162!4.94e-12!2;UBERON:0000122!4.94e-12!2;UBERON:0004733!3.11e-11!12;UBERON:0002028!3.11e-11!12;UBERON:0007277!3.11e-11!12;UBERON:0002791!6.02e-11!33;UBERON:0001893!1.36e-10!34;UBERON:0003056!7.89e-10!61;UBERON:0002020!2.48e-08!34;UBERON:0003528!2.48e-08!34;UBERON:0002240!3.82e-08!3;UBERON:0002619!1.17e-07!22;UBERON:0000941!6.43e-07!1;UBERON:0004904!6.43e-07!1;UBERON:0002464!6.43e-07!1;UBERON:0001021!6.43e-07!1;UBERON:0001785!6.43e-07!1;UBERON:0001869!7.08e-07!32;UBERON:0002336!8.97e-07!1;UBERON:0001018!8.97e-07!1;UBERON:0002473!8.97e-07!1;UBERON:0005340!8.97e-07!1;UBERON:0002316!8.97e-07!1;UBERON:0003544!8.97e-07!1;UBERON:0001020!8.97e-07!1;UBERON:0005970!8.97e-07!1;UBERON:0002437!8.97e-07!1|ontology_enrichment_uberon_v019=UBERON:0001896;9.30e-28;3!UBERON:0005290;9.30e-28;3!UBERON:0000941;6.31e-21;1!UBERON:0001785;6.31e-21;1!UBERON:0002464;6.31e-21;1!UBERON:0004904;6.31e-21;1!UBERON:0001021;6.31e-21;1!UBERON:0004732;1.73e-14;13!UBERON:0002298;2.04e-14;6!UBERON:0002360;3.70e-11;2!UBERON:0001954;3.70e-11;2!UBERON:0003714;3.70e-11;2!UBERON:0005162;3.70e-11;2!UBERON:0000122;3.70e-11;2!UBERON:0000094;3.70e-11;2!UBERON:0003022;3.70e-11;2!UBERON:0002421;3.70e-11;2!UBERON:0002600;3.70e-11;2!UBERON:0010743;3.70e-11;2!UBERON:0001017;1.52e-09;75!UBERON:0002114;5.73e-08;2!UBERON:0004733;1.13e-07;12!UBERON:0002028;1.13e-07;12!UBERON:0000955;4.98e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0001896,9.30e-28,3;UBERON:0005290,9.30e-28,3;UBERON:0010096,9.30e-28,3;UBERON:0000941,7.72e-21,1;UBERON:0001785,7.72e-21,1;UBERON:0002464,7.72e-21,1;UBERON:0004904,7.72e-21,1;UBERON:0001021,7.72e-21,1;UBERON:0003902,7.72e-21,1;UBERON:0005425,7.72e-21,1;UBERON:0004732,1.81e-14,13;UBERON:0002298,2.04e-14,6;UBERON:0001016,1.97e-13,89;UBERON:0001017,1.74e-11,81;UBERON:0002360,3.70e-11,2;UBERON:0000094,3.70e-11,2;UBERON:0010743,3.70e-11,2;UBERON:0003714,4.09e-11,2;UBERON:0005162,4.09e-11,2;UBERON:0000122,4.09e-11,2;UBERON:0001954,4.52e-11,2;UBERON:0003022,4.52e-11,2;UBERON:0002421,4.52e-11,2;UBERON:0002600,4.52e-11,2;UBERON:0000955,3.75e-10,68;UBERON:0006238,3.75e-10,68;UBERON:0002114,5.93e-08,2;UBERON:0004733,1.13e-07,12;UBERON:0002028,1.13e-07,12;UBERON:0007277,1.13e-07,12;UBERON:0004121,6.74e-07,171;UBERON:0000924,6.74e-07,171;UBERON:0006601,6.74e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=124857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30916 | |||
|TSSclassifier=S | |||
|UniProt=Q8TEU8 | |||
|association_with_transcript=147bp_to_ENST00000311378_5end | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_3_at_WFIKKN2_5end | |||
|id=chr17:48912918..48912925,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.31e-21;1!UBERON:0006238;3.69e-08;10!UBERON:0003056;7.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.92e-32!94;UBERON:0001016!9.92e-32!94;UBERON:0005743!1.07e-29!86;UBERON:0001017!1.55e-28!82;UBERON:0001049!1.07e-25!57;UBERON:0005068!1.07e-25!57;UBERON:0006241!1.07e-25!57;UBERON:0007135!1.07e-25!57;UBERON:0000955!7.27e-23!69;UBERON:0006238!7.27e-23!69;UBERON:0003075!4.60e-20!86;UBERON:0007284!4.60e-20!86;UBERON:0007023!2.60e-19!115;UBERON:0002616!3.77e-19!59;UBERON:0002346!5.49e-19!90;UBERON:0001896!1.26e-17!3;UBERON:0005290!1.26e-17!3;UBERON:0010096!1.26e-17!3;UBERON:0002298!4.98e-17!8;UBERON:0003076!6.15e-17!15;UBERON:0003057!6.15e-17!15;UBERON:0004121!1.92e-15!169;UBERON:0000924!5.76e-15!173;UBERON:0006601!5.76e-15!173;UBERON:0004732!1.09e-14!13;UBERON:0000153!3.12e-13!129;UBERON:0007811!3.12e-13!129;UBERON:0002780!5.11e-13!41;UBERON:0001890!5.11e-13!41;UBERON:0006240!5.11e-13!41;UBERON:0003080!1.15e-12!42;UBERON:0000033!1.26e-12!123;UBERON:0005162!4.94e-12!2;UBERON:0000122!4.94e-12!2;UBERON:0004733!3.11e-11!12;UBERON:0002028!3.11e-11!12;UBERON:0007277!3.11e-11!12;UBERON:0002791!6.02e-11!33;UBERON:0001893!1.36e-10!34;UBERON:0003056!7.89e-10!61;UBERON:0002020!2.48e-08!34;UBERON:0003528!2.48e-08!34;UBERON:0002240!3.82e-08!3;UBERON:0002619!1.17e-07!22;UBERON:0000941!6.43e-07!1;UBERON:0004904!6.43e-07!1;UBERON:0002464!6.43e-07!1;UBERON:0001021!6.43e-07!1;UBERON:0001785!6.43e-07!1;UBERON:0001869!7.08e-07!32;UBERON:0002336!8.97e-07!1;UBERON:0001018!8.97e-07!1;UBERON:0002473!8.97e-07!1;UBERON:0005340!8.97e-07!1;UBERON:0002316!8.97e-07!1;UBERON:0003544!8.97e-07!1;UBERON:0001020!8.97e-07!1;UBERON:0005970!8.97e-07!1;UBERON:0002437!8.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;9.30e-28;3!UBERON:0005290;9.30e-28;3!UBERON:0000941;6.31e-21;1!UBERON:0001785;6.31e-21;1!UBERON:0002464;6.31e-21;1!UBERON:0004904;6.31e-21;1!UBERON:0001021;6.31e-21;1!UBERON:0004732;1.73e-14;13!UBERON:0002298;2.04e-14;6!UBERON:0002360;3.70e-11;2!UBERON:0001954;3.70e-11;2!UBERON:0003714;3.70e-11;2!UBERON:0005162;3.70e-11;2!UBERON:0000122;3.70e-11;2!UBERON:0000094;3.70e-11;2!UBERON:0003022;3.70e-11;2!UBERON:0002421;3.70e-11;2!UBERON:0002600;3.70e-11;2!UBERON:0010743;3.70e-11;2!UBERON:0001017;1.52e-09;75!UBERON:0002114;5.73e-08;2!UBERON:0004733;1.13e-07;12!UBERON:0002028;1.13e-07;12!UBERON:0000955;4.98e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,9.30e-28,3;UBERON:0005290,9.30e-28,3;UBERON:0010096,9.30e-28,3;UBERON:0000941,7.72e-21,1;UBERON:0001785,7.72e-21,1;UBERON:0002464,7.72e-21,1;UBERON:0004904,7.72e-21,1;UBERON:0001021,7.72e-21,1;UBERON:0003902,7.72e-21,1;UBERON:0005425,7.72e-21,1;UBERON:0004732,1.81e-14,13;UBERON:0002298,2.04e-14,6;UBERON:0001016,1.97e-13,89;UBERON:0001017,1.74e-11,81;UBERON:0002360,3.70e-11,2;UBERON:0000094,3.70e-11,2;UBERON:0010743,3.70e-11,2;UBERON:0003714,4.09e-11,2;UBERON:0005162,4.09e-11,2;UBERON:0000122,4.09e-11,2;UBERON:0001954,4.52e-11,2;UBERON:0003022,4.52e-11,2;UBERON:0002421,4.52e-11,2;UBERON:0002600,4.52e-11,2;UBERON:0000955,3.75e-10,68;UBERON:0006238,3.75e-10,68;UBERON:0002114,5.93e-08,2;UBERON:0004733,1.13e-07,12;UBERON:0002028,1.13e-07,12;UBERON:0007277,1.13e-07,12;UBERON:0004121,6.74e-07,171;UBERON:0000924,6.74e-07,171;UBERON:0006601,6.74e-07,171 | |||
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|short_description=p3@WFIKKN2 | |||
}} |
Revision as of 14:34, 11 September 2013
Short description: | p3@WFIKKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_WFIKKN2_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 147bp_to_ENST00000311378_5end |
EntrezGene: | WFIKKN2 |
HGNC: | 30916 |
UniProt: | Q8TEU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 9.30e-28 | 3 |
myelencephalon | 9.30e-28 | 3 |
future myelencephalon | 9.30e-28 | 3 |
cranial nerve II | 7.72e-21 | 1 |
cranial nerve | 7.72e-21 | 1 |
nerve trunk | 7.72e-21 | 1 |
nerve connecting eye with brain | 7.72e-21 | 1 |
nerve | 7.72e-21 | 1 |
retinal neural layer | 7.72e-21 | 1 |
presumptive neural retina | 7.72e-21 | 1 |
segmental subdivision of nervous system | 1.81e-14 | 13 |
brainstem | 2.04e-14 | 6 |
nervous system | 1.97e-13 | 89 |
central nervous system | 1.74e-11 | 81 |
meninx | 3.70e-11 | 2 |
membrane organ | 3.70e-11 | 2 |
meningeal cluster | 3.70e-11 | 2 |
neural tissue | 4.09e-11 | 2 |
multi cell component structure | 4.09e-11 | 2 |
neuron projection bundle | 4.09e-11 | 2 |
Ammon's horn | 4.52e-11 | 2 |
lobe parts of cerebral cortex | 4.52e-11 | 2 |
hippocampal formation | 4.52e-11 | 2 |
limbic lobe | 4.52e-11 | 2 |
brain | 3.75e-10 | 68 |
future brain | 3.75e-10 | 68 |
duodenum | 5.93e-08 | 2 |
segmental subdivision of hindbrain | 1.13e-07 | 12 |
hindbrain | 1.13e-07 | 12 |
presumptive hindbrain | 1.13e-07 | 12 |
ectoderm-derived structure | 6.74e-07 | 171 |
ectoderm | 6.74e-07 | 171 |
presumptive ectoderm | 6.74e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.