FFCP PHASE1:Hg19::chr1:19778700..19778738,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C368|description=CAGE_peak_at_chr1:19778700..19778738,-|id=chr1:19778700..19778738,-|ontology_enrichment_celltype=CL:0000055!5.80e-17!180;CL:0000057!4.43e-13!75;CL:0000680!9.13e-09!57;CL:0000056!9.13e-09!57;CL:0000355!9.13e-09!57;CL:0000183!9.59e-08!59;CL:0000187!1.73e-07!54;CL:0002570!4.49e-07!8|ontology_enrichment_celltype_v019=CL:0002564;1.36e-08;3!CL:0000359;1.80e-08;32!CL:0000192;8.16e-08;43!CL:0002582;2.29e-07;3!CL:0002570;4.22e-07;8!CL:0002540;8.27e-07;6|ontology_enrichment_celltype_v019_2=CL:0000192,2.26e-09,43;CL:0000514,2.26e-09,43;CL:0000057,4.71e-09,76;CL:0000680,5.47e-09,58;CL:0000056,5.47e-09,58;CL:0000355,5.47e-09,58;CL:0000359,8.74e-09,32;CL:0000187,1.36e-08,55;CL:0002564,1.36e-08,3;CL:0002582,1.53e-07,3;CL:0000393,2.49e-07,61;CL:0000211,2.49e-07,61;CL:0000048,2.55e-07,427;CL:0002570,4.10e-07,8;CL:0000723,5.20e-07,433;CL:0002540,8.69e-07,6|ontology_enrichment_development_v019=CL:0000514;8.16e-08;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.56e-12!83;UBERON:0002329!1.56e-12!83;UBERON:0003077!1.56e-12!83;UBERON:0003059!1.56e-12!83;UBERON:0007282!1.56e-12!83;UBERON:0009618!1.56e-12!83;UBERON:0007285!1.56e-12!83;UBERON:0004290!5.49e-10!70;UBERON:0007023!6.52e-09!115;UBERON:0000486!1.41e-08!82;UBERON:0002385!1.44e-08!63;UBERON:0001015!1.44e-08!63;UBERON:0000383!1.44e-08!63;UBERON:0001013!3.66e-08!14;UBERON:0001134!4.53e-08!61;UBERON:0002036!4.53e-08!61;UBERON:0003082!4.53e-08!61;UBERON:0000475!9.09e-08!365;UBERON:0000479!4.61e-07!787;UBERON:0000481!4.72e-07!347;UBERON:0002200!6.49e-07!11;UBERON:0006876!6.49e-07!11;UBERON:0000477!8.62e-07!286|ontology_enrichment_uberon_v019=UBERON:0004905;2.80e-14;8!UBERON:0000982;2.80e-14;8!UBERON:0004770;2.80e-14;8!UBERON:0011135;3.26e-13;5!UBERON:0002216;3.26e-13;5!UBERON:0011134;3.26e-13;5!UBERON:0002209;3.26e-13;5!UBERON:0002213;3.26e-13;5!UBERON:0007844;3.26e-13;5!UBERON:0011138;3.26e-13;5!UBERON:0001130;3.26e-13;5!UBERON:0001066;3.26e-13;5!UBERON:0001468;3.26e-13;5!UBERON:0001434;3.21e-11;36!UBERON:0000075;1.52e-10;16!UBERON:0001013;3.22e-09;14!UBERON:0004765;3.87e-09;26!UBERON:0002242;1.36e-08;3!UBERON:0002204;1.92e-08;70!UBERON:0005284;2.28e-08;5!UBERON:0006876;2.33e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0004905,4.05e-14,8;UBERON:0000982,4.05e-14,8;UBERON:0004770,4.05e-14,8;UBERON:0011135,3.29e-13,5;UBERON:0002216,3.29e-13,5;UBERON:0011134,3.29e-13,5;UBERON:0002209,3.29e-13,5;UBERON:0002213,3.29e-13,5;UBERON:0005856,3.29e-13,5;UBERON:0005866,3.29e-13,5;UBERON:0005863,3.29e-13,5;UBERON:0007844,3.29e-13,5;UBERON:0011138,3.29e-13,5;UBERON:0001130,3.29e-13,5;UBERON:0001066,3.29e-13,5;UBERON:0001468,3.29e-13,5;UBERON:0002329,1.15e-11,71;UBERON:0003059,1.15e-11,71;UBERON:0007282,1.15e-11,71;UBERON:0004290,1.15e-11,71;UBERON:0009618,1.15e-11,71;UBERON:0003077,2.04e-11,72;UBERON:0007285,2.04e-11,72;UBERON:0007524,3.56e-11,73;UBERON:0000486,5.45e-11,83;UBERON:0000075,1.28e-10,16;UBERON:0007503,4.55e-10,78;UBERON:0001013,2.52e-09,14;UBERON:0002204,2.77e-09,167;UBERON:0002242,1.36e-08,3;UBERON:0003068,1.36e-08,3;UBERON:0002328,1.36e-08,3;UBERON:0004880,1.36e-08,3;UBERON:0005284,2.13e-08,5;UBERON:0001134,4.09e-08,62;UBERON:0002036,4.09e-08,62;UBERON:0003082,4.09e-08,62;UBERON:0002385,1.01e-07,64;UBERON:0001015,1.01e-07,64;UBERON:0000383,1.01e-07,64;UBERON:0011137,2.53e-07,14;UBERON:0006876,2.72e-07,11|phase1_expression=0.363356758541113,1.2846031433459,0,0,0,0.872338524100369,0,19.5833160762318,1.56711376919903,0,0,0,0,17.8223548262467,15.90707403494,0,0,0,0,1.23121058076788,2.04000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.580418477257168,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,2.50668955317945,0.579386075843295,0,0,0.0945348171640679,0.443458794925128,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0,2.17847724779836,0.134710672069688,0.163461903113459,48.1316619910882,29.3849721484799,0.937285727335186,4.99456122928513,2.2818872861778,6.57574194427925,0,0.161872944368132,0,12.8617127890583,0.982674538494144,7.95608515053394,0,0.494533858557114,3.64064544775211,5.03032699271367,1.68336113954066,0.875829639103749,4.98715407871529,0.438977620880838,1.22595118319608,1.50238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.721367704669072,0,0,0.168776332241266,0,0.504867548488229,0.184099797284599,1.9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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_at_chr1:19778700..19778738,- | |||
|id=chr1:19778700..19778738,- | |||
|ontology_enrichment_celltype=CL:0000055!5.80e-17!180;CL:0000057!4.43e-13!75;CL:0000680!9.13e-09!57;CL:0000056!9.13e-09!57;CL:0000355!9.13e-09!57;CL:0000183!9.59e-08!59;CL:0000187!1.73e-07!54;CL:0002570!4.49e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.36e-08;3!CL:0000359;1.80e-08;32!CL:0000192;8.16e-08;43!CL:0002582;2.29e-07;3!CL:0002570;4.22e-07;8!CL:0002540;8.27e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.26e-09,43;CL:0000514,2.26e-09,43;CL:0000057,4.71e-09,76;CL:0000680,5.47e-09,58;CL:0000056,5.47e-09,58;CL:0000355,5.47e-09,58;CL:0000359,8.74e-09,32;CL:0000187,1.36e-08,55;CL:0002564,1.36e-08,3;CL:0002582,1.53e-07,3;CL:0000393,2.49e-07,61;CL:0000211,2.49e-07,61;CL:0000048,2.55e-07,427;CL:0002570,4.10e-07,8;CL:0000723,5.20e-07,433;CL:0002540,8.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;8.16e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.56e-12!83;UBERON:0002329!1.56e-12!83;UBERON:0003077!1.56e-12!83;UBERON:0003059!1.56e-12!83;UBERON:0007282!1.56e-12!83;UBERON:0009618!1.56e-12!83;UBERON:0007285!1.56e-12!83;UBERON:0004290!5.49e-10!70;UBERON:0007023!6.52e-09!115;UBERON:0000486!1.41e-08!82;UBERON:0002385!1.44e-08!63;UBERON:0001015!1.44e-08!63;UBERON:0000383!1.44e-08!63;UBERON:0001013!3.66e-08!14;UBERON:0001134!4.53e-08!61;UBERON:0002036!4.53e-08!61;UBERON:0003082!4.53e-08!61;UBERON:0000475!9.09e-08!365;UBERON:0000479!4.61e-07!787;UBERON:0000481!4.72e-07!347;UBERON:0002200!6.49e-07!11;UBERON:0006876!6.49e-07!11;UBERON:0000477!8.62e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.80e-14;8!UBERON:0000982;2.80e-14;8!UBERON:0004770;2.80e-14;8!UBERON:0011135;3.26e-13;5!UBERON:0002216;3.26e-13;5!UBERON:0011134;3.26e-13;5!UBERON:0002209;3.26e-13;5!UBERON:0002213;3.26e-13;5!UBERON:0007844;3.26e-13;5!UBERON:0011138;3.26e-13;5!UBERON:0001130;3.26e-13;5!UBERON:0001066;3.26e-13;5!UBERON:0001468;3.26e-13;5!UBERON:0001434;3.21e-11;36!UBERON:0000075;1.52e-10;16!UBERON:0001013;3.22e-09;14!UBERON:0004765;3.87e-09;26!UBERON:0002242;1.36e-08;3!UBERON:0002204;1.92e-08;70!UBERON:0005284;2.28e-08;5!UBERON:0006876;2.33e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,4.05e-14,8;UBERON:0000982,4.05e-14,8;UBERON:0004770,4.05e-14,8;UBERON:0011135,3.29e-13,5;UBERON:0002216,3.29e-13,5;UBERON:0011134,3.29e-13,5;UBERON:0002209,3.29e-13,5;UBERON:0002213,3.29e-13,5;UBERON:0005856,3.29e-13,5;UBERON:0005866,3.29e-13,5;UBERON:0005863,3.29e-13,5;UBERON:0007844,3.29e-13,5;UBERON:0011138,3.29e-13,5;UBERON:0001130,3.29e-13,5;UBERON:0001066,3.29e-13,5;UBERON:0001468,3.29e-13,5;UBERON:0002329,1.15e-11,71;UBERON:0003059,1.15e-11,71;UBERON:0007282,1.15e-11,71;UBERON:0004290,1.15e-11,71;UBERON:0009618,1.15e-11,71;UBERON:0003077,2.04e-11,72;UBERON:0007285,2.04e-11,72;UBERON:0007524,3.56e-11,73;UBERON:0000486,5.45e-11,83;UBERON:0000075,1.28e-10,16;UBERON:0007503,4.55e-10,78;UBERON:0001013,2.52e-09,14;UBERON:0002204,2.77e-09,167;UBERON:0002242,1.36e-08,3;UBERON:0003068,1.36e-08,3;UBERON:0002328,1.36e-08,3;UBERON:0004880,1.36e-08,3;UBERON:0005284,2.13e-08,5;UBERON:0001134,4.09e-08,62;UBERON:0002036,4.09e-08,62;UBERON:0003082,4.09e-08,62;UBERON:0002385,1.01e-07,64;UBERON:0001015,1.01e-07,64;UBERON:0000383,1.01e-07,64;UBERON:0011137,2.53e-07,14;UBERON:0006876,2.72e-07,11 | |||
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| |||
|short_description=p@chr1:19778700..19778738,- | |||
}} |
Revision as of 02:34, 12 September 2013
Short description: | p@chr1:19778700..19778738, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:19778700..19778738, - |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.26e-09 | 43 |
smooth muscle myoblast | 2.26e-09 | 43 |
fibroblast | 4.71e-09 | 76 |
muscle precursor cell | 5.47e-09 | 58 |
myoblast | 5.47e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.47e-09 | 58 |
vascular associated smooth muscle cell | 8.74e-09 | 32 |
muscle cell | 1.36e-08 | 55 |
nucleus pulposus cell of intervertebral disc | 1.36e-08 | 3 |
visceral preadipocyte | 1.53e-07 | 3 |
electrically responsive cell | 2.49e-07 | 61 |
electrically active cell | 2.49e-07 | 61 |
multi fate stem cell | 2.55e-07 | 427 |
mesenchymal stem cell of adipose | 4.10e-07 | 8 |
somatic stem cell | 5.20e-07 | 433 |
mesenchymal stem cell of the bone marrow | 8.69e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.