FFCP PHASE1:Hg19::chr20:3388207..3388236,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17721 | |||
|TSSclassifier=S | |||
|UniProt=Q0IIP3,Q5TEA3 | |||
|association_with_transcript=18bp_to_NM_001009984,uc002wii.2_5end | |||
|description=CAGE_peak_4_at_C20orf194_5end | |||
|id=chr20:3388207..3388236,- | |||
|ontology_enrichment_celltype=CL:0000557!4.69e-12!71;CL:0002009!1.10e-09!65;CL:0002057!1.54e-09!42;CL:0000839!2.13e-09!70;CL:0002194!7.64e-09!63;CL:0000576!7.64e-09!63;CL:0000040!7.64e-09!63;CL:0000559!7.64e-09!63;CL:0000766!3.57e-08!76;CL:0000860!2.55e-07!45;CL:0000763!6.07e-07!112;CL:0000049!6.07e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.57e-11;33!CL:0002057;2.57e-11;33!CL:0000473;2.01e-10;39!CL:0000234;2.01e-10;39!CL:0000576;1.90e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.99e-15,67;CL:0002009,2.50e-12,61;CL:0000839,3.12e-12,66;CL:0002194,2.37e-11,59;CL:0000576,2.37e-11,59;CL:0000040,2.37e-11,59;CL:0000559,2.37e-11,59;CL:0000766,6.27e-11,72;CL:0000473,7.04e-11,48;CL:0000234,7.04e-11,48;CL:0000860,1.69e-09,42;CL:0002057,1.69e-09,42;CL:0000763,2.54e-09,108;CL:0000049,2.54e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.88e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;3.45e-12;41!UBERON:0001890;3.45e-12;41!UBERON:0001893;3.61e-12;34!UBERON:0003528;6.35e-12;34!UBERON:0002020;6.35e-12;34!UBERON:0001869;7.83e-12;32!UBERON:0000073;9.39e-12;53!UBERON:0002616;9.39e-12;53!UBERON:0002791;1.08e-11;32!UBERON:0002619;2.55e-11;22!UBERON:0000956;9.84e-11;25!UBERON:0000203;9.84e-11;25!UBERON:0001950;2.48e-10;20!UBERON:0000955;2.70e-08;68!UBERON:0001017;3.50e-08;75!UBERON:0001016;6.83e-08;83 | |||
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| |||
|short_description=p4@C20orf194 | |||
}} |
Revision as of 08:12, 12 September 2013
Short description: | p4@C20orf194 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_C20orf194_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_NM_001009984, uc002wii.2_5end |
EntrezGene: | C20orf194 |
HGNC: | 17721 |
UniProt: | Q0IIP3Q5TEA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.99e-15 | 67 |
macrophage dendritic cell progenitor | 2.50e-12 | 61 |
myeloid lineage restricted progenitor cell | 3.12e-12 | 66 |
monopoietic cell | 2.37e-11 | 59 |
monocyte | 2.37e-11 | 59 |
monoblast | 2.37e-11 | 59 |
promonocyte | 2.37e-11 | 59 |
myeloid leukocyte | 6.27e-11 | 72 |
defensive cell | 7.04e-11 | 48 |
phagocyte | 7.04e-11 | 48 |
classical monocyte | 1.69e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-09 | 42 |
myeloid cell | 2.54e-09 | 108 |
common myeloid progenitor | 2.54e-09 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.