FFCP PHASE1:Hg19::chr21:36259830..36259842,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=861|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10471|TSSclassifier=N|UniProt=|association_with_transcript=-350bp_to_ENST00000399240_5end|coexpression_cluster_id=C65|description=CAGE_peak_30_at_RUNX1_5end|id=chr21:36259830..36259842,-|ontology_enrichment_celltype=CL:0002057!6.23e-13!42;CL:0000134!7.32e-13!358;CL:0002320!4.52e-12!365;CL:0000860!7.51e-12!45;CL:0000763!1.99e-11!112;CL:0000049!1.99e-11!112;CL:0000219!3.38e-11!390;CL:0002194!7.44e-11!63;CL:0000576!7.44e-11!63;CL:0000040!7.44e-11!63;CL:0000559!7.44e-11!63;CL:0000723!1.28e-10!436;CL:0000839!1.46e-10!70;CL:0000048!2.16e-10!430;CL:0000557!3.31e-10!71;CL:0000766!4.06e-10!76;CL:0002009!4.27e-10!65;CL:0000034!1.42e-09!444;CL:0000063!4.71e-08!578;CL:0000548!7.03e-08!679;CL:0000004!7.03e-08!679;CL:0000255!7.03e-08!679;CL:0000012!1.52e-07!682;CL:0000144!4.83e-07!625|ontology_enrichment_celltype_v019=CL:0000860;3.61e-64;33!CL:0002057;3.61e-64;33!CL:0000473;4.51e-48;39!CL:0000234;4.51e-48;39!CL:0000576;2.98e-34;48!CL:0000766;9.29e-18;69!CL:0000763;4.43e-10;100!CL:0000738;9.86e-08;136!CL:0002087;2.35e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,9.02e-61,42;CL:0002057,9.02e-61,42;CL:0000473,5.13e-58,48;CL:0000234,5.13e-58,48;CL:0002194,1.61e-45,59;CL:0000576,1.61e-45,59;CL:0000040,1.61e-45,59;CL:0000559,1.61e-45,59;CL:0002009,6.61e-44,61;CL:0000839,2.70e-40,66;CL:0000557,1.23e-39,67;CL:0000766,1.30e-36,72;CL:0000763,2.18e-25,108;CL:0000049,2.18e-25,108;CL:0002087,1.62e-23,115;CL:0002031,2.38e-22,120;CL:0000738,3.45e-19,136;CL:0002032,4.01e-17,161;CL:0000837,4.01e-17,161;CL:0000037,3.27e-16,168;CL:0000988,3.82e-15,177;CL:0000134,4.73e-09,354;CL:0002320,9.11e-09,361;CL:0000219,9.15e-08,386|ontology_enrichment_development_v019=CL:0002057;1.65e-43;42!CL:0000049;5.99e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:9119;2.91e-07;1|ontology_enrichment_disease_v019_2=DOID:9119,2.35e-07,1|ontology_enrichment_uberon=UBERON:0002384!6.86e-12!375;UBERON:0002371!2.30e-09!80;UBERON:0001474!1.12e-08!86;UBERON:0002390!6.78e-07!102;UBERON:0003061!6.78e-07!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.53e-38,76;UBERON:0001474,7.82e-35,82;UBERON:0004765,2.33e-31,90;UBERON:0002405,3.29e-30,93;UBERON:0002390,1.91e-28,98;UBERON:0003061,1.91e-28,98;UBERON:0001434,8.64e-28,100;UBERON:0002193,2.09e-25,108;UBERON:0002204,2.31e-16,167;UBERON:0003081,6.61e-14,203;UBERON:0000926,7.29e-10,315;UBERON:0004120,7.29e-10,315;UBERON:0006603,7.29e-10,315;UBERON:0002384,2.22e-08,371|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,1.0007329835313,0,0,0,0.631719873426831,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0.293600439334847,0,1.40381113229099,0,0.223915474239924,0,0.257575567634187,1.16318591023652,0.755751887377619,0.727752183563449,1.39457422143411,2.87817521615278,2.47765096716083,3.16461631554365,3.58624989140741,0.47296445977717,0.689491361473237,0,0,2.63539275359647,3.27487380069415,0.224723484445085,3.06083892370903,0,1.91801137739712,1.31940520074686,2.59302754908121,2.55734850319616,2.03146467040009,1.70215567407342,3.73693349397345,4.52247597462138,2.60741459210101,2.6062661364614,0.605399502633369,1.10483290796269,0.632924774881769,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0.570471821544449,0.149448680551801,0,0.323745888736263,0,0,0.245668634623536,0.309977343527296,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0.717558542755448,0.640672166455702,0,0,0.412210116953756,0,0.558350568994769,0.168776332241266,0.194874010322397,0.252433774244115,0.552299391853796,0,0.355009592516614,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.402115889646523,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0.766765358330422,0.492663237895943,0.616339038092582,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10471 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-350bp_to_ENST00000399240_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_30_at_RUNX1_5end | |||
|id=chr21:36259830..36259842,- | |||
|ontology_enrichment_celltype=CL:0002057!6.23e-13!42;CL:0000134!7.32e-13!358;CL:0002320!4.52e-12!365;CL:0000860!7.51e-12!45;CL:0000763!1.99e-11!112;CL:0000049!1.99e-11!112;CL:0000219!3.38e-11!390;CL:0002194!7.44e-11!63;CL:0000576!7.44e-11!63;CL:0000040!7.44e-11!63;CL:0000559!7.44e-11!63;CL:0000723!1.28e-10!436;CL:0000839!1.46e-10!70;CL:0000048!2.16e-10!430;CL:0000557!3.31e-10!71;CL:0000766!4.06e-10!76;CL:0002009!4.27e-10!65;CL:0000034!1.42e-09!444;CL:0000063!4.71e-08!578;CL:0000548!7.03e-08!679;CL:0000004!7.03e-08!679;CL:0000255!7.03e-08!679;CL:0000012!1.52e-07!682;CL:0000144!4.83e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.61e-64;33!CL:0002057;3.61e-64;33!CL:0000473;4.51e-48;39!CL:0000234;4.51e-48;39!CL:0000576;2.98e-34;48!CL:0000766;9.29e-18;69!CL:0000763;4.43e-10;100!CL:0000738;9.86e-08;136!CL:0002087;2.35e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.02e-61,42;CL:0002057,9.02e-61,42;CL:0000473,5.13e-58,48;CL:0000234,5.13e-58,48;CL:0002194,1.61e-45,59;CL:0000576,1.61e-45,59;CL:0000040,1.61e-45,59;CL:0000559,1.61e-45,59;CL:0002009,6.61e-44,61;CL:0000839,2.70e-40,66;CL:0000557,1.23e-39,67;CL:0000766,1.30e-36,72;CL:0000763,2.18e-25,108;CL:0000049,2.18e-25,108;CL:0002087,1.62e-23,115;CL:0002031,2.38e-22,120;CL:0000738,3.45e-19,136;CL:0002032,4.01e-17,161;CL:0000837,4.01e-17,161;CL:0000037,3.27e-16,168;CL:0000988,3.82e-15,177;CL:0000134,4.73e-09,354;CL:0002320,9.11e-09,361;CL:0000219,9.15e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.65e-43;42!CL:0000049;5.99e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;2.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,2.35e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.86e-12!375;UBERON:0002371!2.30e-09!80;UBERON:0001474!1.12e-08!86;UBERON:0002390!6.78e-07!102;UBERON:0003061!6.78e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.53e-38,76;UBERON:0001474,7.82e-35,82;UBERON:0004765,2.33e-31,90;UBERON:0002405,3.29e-30,93;UBERON:0002390,1.91e-28,98;UBERON:0003061,1.91e-28,98;UBERON:0001434,8.64e-28,100;UBERON:0002193,2.09e-25,108;UBERON:0002204,2.31e-16,167;UBERON:0003081,6.61e-14,203;UBERON:0000926,7.29e-10,315;UBERON:0004120,7.29e-10,315;UBERON:0006603,7.29e-10,315;UBERON:0002384,2.22e-08,371 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,1.0007329835313,0,0,0,0.631719873426831,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0.293600439334847,0,1.40381113229099,0,0.223915474239924,0,0.257575567634187,1.16318591023652,0.755751887377619,0.727752183563449,1.39457422143411,2.87817521615278,2.47765096716083,3.16461631554365,3.58624989140741,0.47296445977717,0.689491361473237,0,0,2.63539275359647,3.27487380069415,0.224723484445085,3.06083892370903,0,1.91801137739712,1.31940520074686,2.59302754908121,2.55734850319616,2.03146467040009,1.70215567407342,3.73693349397345,4.52247597462138,2.60741459210101,2.6062661364614,0.605399502633369,1.10483290796269,0.632924774881769,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0.570471821544449,0.149448680551801,0,0.323745888736263,0,0,0.245668634623536,0.309977343527296,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0.717558542755448,0.640672166455702,0,0,0.412210116953756,0,0.558350568994769,0.168776332241266,0.194874010322397,0.252433774244115,0.552299391853796,0,0.355009592516614,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.402115889646523,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0.766765358330422,0.492663237895943,0.616339038092582,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.434418072340414,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0.744323423456331,0.61384789315225,0.841980283299221,0.384417447767103,0.511707249066704,0.804269605718038,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0,0.802025881213139,0.0920809889358963,0.229628896329213,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,1.95018073810956,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.165284915360978,0.384380134730212,0.255225424989168,0,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.565621727814851,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.284567373393656,0.318852545457645,0,0,0.846694330895531,0.649243880549111,0.842391534340376,0.456469358066384,0.156679895773023,0,0.338583555603207,0.802940375518498,0.605399121573143,0,0.687010689511529,0,0,0.333698283423817,0,0.556812347790485,0,0.540911356951966,1.6653598399891,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0,0.333926115068718,0.494411622680279,0,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0.933118762985422,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0.108647371922008,0.31900115973192,0,0,1.02193298195737,0.627921025580099,0.332423363800313,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.52418000472609,0,0,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0.576219191952599,0,0.707082103850386,0.271808412147228,0.104602846312333,0,0.288950589901519,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0,0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| |||
|short_description=p30@RUNX1 | |||
}} |
Revision as of 10:14, 12 September 2013
Short description: | p30@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_RUNX1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -350bp_to_ENST00000399240_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.02e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.02e-61 | 42 |
defensive cell | 5.13e-58 | 48 |
phagocyte | 5.13e-58 | 48 |
monopoietic cell | 1.61e-45 | 59 |
monocyte | 1.61e-45 | 59 |
monoblast | 1.61e-45 | 59 |
promonocyte | 1.61e-45 | 59 |
macrophage dendritic cell progenitor | 6.61e-44 | 61 |
myeloid lineage restricted progenitor cell | 2.70e-40 | 66 |
granulocyte monocyte progenitor cell | 1.23e-39 | 67 |
myeloid leukocyte | 1.30e-36 | 72 |
myeloid cell | 2.18e-25 | 108 |
common myeloid progenitor | 2.18e-25 | 108 |
nongranular leukocyte | 1.62e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 2.38e-22 | 120 |
leukocyte | 3.45e-19 | 136 |
hematopoietic oligopotent progenitor cell | 4.01e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.01e-17 | 161 |
hematopoietic stem cell | 3.27e-16 | 168 |
hematopoietic cell | 3.82e-15 | 177 |
mesenchymal cell | 4.73e-09 | 354 |
connective tissue cell | 9.11e-09 | 361 |
motile cell | 9.15e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.53e-38 | 76 |
bone element | 7.82e-35 | 82 |
skeletal element | 2.33e-31 | 90 |
immune system | 3.29e-30 | 93 |
hematopoietic system | 1.91e-28 | 98 |
blood island | 1.91e-28 | 98 |
skeletal system | 8.64e-28 | 100 |
hemolymphoid system | 2.09e-25 | 108 |
musculoskeletal system | 2.31e-16 | 167 |
lateral plate mesoderm | 6.61e-14 | 203 |
mesoderm | 7.29e-10 | 315 |
mesoderm-derived structure | 7.29e-10 | 315 |
presumptive mesoderm | 7.29e-10 | 315 |
connective tissue | 2.22e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.35e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.