FFCP PHASE1:Hg19::chr22:44577237..44577262,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64098|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14654|TSSclassifier=S|UniProt=Q9HBI0|association_with_transcript=0bp_to_ENST00000415224,NM_001137606,uc003beq.2,uc011aqf.1_5end|coexpression_cluster_id=C805|description=CAGE_peak_3_at_PARVG_5end|id=chr22:44577237..44577262,+|ontology_enrichment_celltype=CL:0000037!1.94e-74!172;CL:0000566!1.94e-74!172;CL:0002032!2.01e-68!165;CL:0000837!2.01e-68!165;CL:0000988!3.79e-67!182;CL:0000738!1.15e-61!140;CL:0002087!3.92e-52!119;CL:0002031!1.72e-51!124;CL:0000763!1.62e-46!112;CL:0000049!1.62e-46!112;CL:0000766!6.11e-35!76;CL:0000557!9.35e-34!71;CL:0000839!2.45e-31!70;CL:0002009!2.66e-31!65;CL:0002194!1.66e-30!63;CL:0000576!1.66e-30!63;CL:0000040!1.66e-30!63;CL:0000559!1.66e-30!63;CL:0002057!1.06e-27!42;CL:0000860!1.18e-24!45;CL:0000542!3.19e-18!53;CL:0000051!3.19e-18!53;CL:0000838!5.90e-18!52;CL:0000791!2.89e-13!18;CL:0000789!2.89e-13!18;CL:0002420!2.89e-13!18;CL:0002419!2.89e-13!18;CL:0000790!2.89e-13!18;CL:0000134!1.92e-11!358;CL:0002320!1.85e-10!365;CL:0000084!1.19e-09!25;CL:0000827!1.19e-09!25;CL:0000625!1.35e-09!11;CL:0000236!1.11e-08!14;CL:0000945!7.04e-08!24;CL:0000826!7.04e-08!24;CL:0000219!1.18e-07!390;CL:0000451!6.73e-07!10|ontology_enrichment_celltype_v019=CL:0000860;2.19e-25;33!CL:0002057;2.19e-25;33!CL:0000576;6.62e-25;48!CL:0000473;1.51e-23;39!CL:0000234;1.51e-23;39!CL:0000766;8.50e-20;69!CL:0000763;2.96e-18;100!CL:0002087;2.19e-17;104!CL:0000791;3.97e-17;18!CL:0000789;3.97e-17;18!CL:0002419;3.97e-17;18!CL:0000738;1.82e-14;136!CL:0000084;3.62e-13;25!CL:0000988;4.82e-13;177!CL:0000625;2.86e-12;11!CL:0000236;4.32e-11;13!CL:0000542;1.11e-10;53!CL:0000219;2.60e-07;193!CL:0002393;4.56e-07;6!CL:0002397;4.56e-07;6|ontology_enrichment_celltype_v019_2=CL:0000037,1.67e-84,168;CL:0000988,3.92e-78,177;CL:0002032,5.39e-78,161;CL:0000837,5.39e-78,161;CL:0000738,4.83e-71,136;CL:0002087,3.25e-64,115;CL:0002031,1.17e-62,120;CL:0000763,2.17e-56,108;CL:0000049,2.17e-56,108;CL:0000766,4.70e-48,72;CL:0000557,2.48e-46,67;CL:0000839,2.00e-43,66;CL:0002194,3.04e-43,59;CL:0000576,3.04e-43,59;CL:0000040,3.04e-43,59;CL:0000559,3.04e-43,59;CL:0002009,7.63e-43,61;CL:0000473,4.11e-38,48;CL:0000234,4.11e-38,48;CL:0000860,3.36e-35,42;CL:0002057,3.36e-35,42;CL:0000134,1.09e-19,354;CL:0002320,1.29e-18,361;CL:0000838,1.49e-18,52;CL:0000542,5.55e-18,53;CL:0000051,5.55e-18,53;CL:0000791,2.57e-17,18;CL:0000789,2.57e-17,18;CL:0002420,2.57e-17,18;CL:0002419,2.57e-17,18;CL:0000790,2.57e-17,18;CL:0000219,6.68e-15,386;CL:0000084,2.53e-13,25;CL:0000827,2.53e-13,25;CL:0000625,2.23e-12,11;CL:0000236,1.41e-11,14;CL:0000034,1.10e-10,441;CL:0000048,1.52e-10,427;CL:0000723,5.79e-10,433;CL:0002393,2.59e-08,9;CL:0002397,2.59e-08,9|ontology_enrichment_development_v019=CL:0002057;1.04e-25;42!CL:0000790;3.97e-17;18!CL:0000049;3.09e-15;108!CL:0000051;1.11e-10;53|ontology_enrichment_disease=DOID:8692!7.94e-12!31;DOID:1240!6.81e-11!39;DOID:2531!1.09e-07!51;DOID:0060083!1.09e-07!51|ontology_enrichment_disease_v019=DOID:8692;7.70e-13;31!DOID:1240;2.29e-09;39|ontology_enrichment_disease_v019_2=DOID:8692,2.82e-13,31;DOID:1240,5.20e-12,39;DOID:2531,1.73e-07,51;DOID:0060083,1.73e-07,51|ontology_enrichment_uberon=UBERON:0002390!2.73e-38!102;UBERON:0003061!2.73e-38!102;UBERON:0002193!3.51e-34!112;UBERON:0002371!1.63e-28!80;UBERON:0001474!1.60e-25!86;UBERON:0002405!3.27e-20!115;UBERON:0004765!2.45e-19!101;UBERON:0001434!2.45e-19!101;UBERON:0007023!9.96e-19!115;UBERON:0002384!5.21e-10!375;UBERON:0000178!1.19e-07!15;UBERON:0000179!1.19e-07!15;UBERON:0000463!1.19e-07!15;UBERON:0003081!3.90e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;3.05e-10;15!UBERON:0000179;3.05e-10;15!UBERON:0000463;3.05e-10;15!UBERON:0002390;1.09e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.55e-54,98;UBERON:0003061,2.55e-54,98;UBERON:0002193,1.07e-49,108;UBERON:0002371,2.97e-40,76;UBERON:0002405,8.41e-40,93;UBERON:0001474,8.68e-36,82;UBERON:0004765,8.69e-31,90;UBERON:0001434,1.04e-25,100;UBERON:0002384,3.64e-17,371;UBERON:0003081,3.58e-15,203;UBERON:0000178,2.38e-10,15;UBERON:0000179,2.38e-10,15;UBERON:0000463,2.38e-10,15;UBERON:0002204,2.11e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.382067028739756,0.246301768349837,0.0787107813136792,3.14691421479123,3.83829398097213,5.57338043937874,0,0,0,0,0.710846162437108,7.63361142270603,5.53995408531877,7.2196001089251,9.11445657006578,3.80656306207871,0.647787332037959,3.09090681161024,3.63495596948912,1.88937971844405,3.88134497900506,5.34586784883075,4.11167888021826,2.16794459626573,5.17846306179871,5.12321413058201,2.36482229888585,9.3081333798887,2.5819387343353,5.41705946377367,4.51781614902251,4.63940455098338,2.69668181334102,5.50951006267625,4.17207735198922,7.67204550958849,1.9791078011203,3.39088217956774,0.852449501065388,4.93355705668593,6.80862269629368,3.73693349397345,5.52747063564835,6.77927793946262,5.2125322729228,4.23779651843358,6.62899744777616,4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0227,2.00675416412032,0,0.203974470572744,0.436350690340377,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0,1.55149493792843,1.0661699095049,0.714193294391221,3.22944549180031,5.27635071514792,0,0.0636471582781649,0,0,0,3.7717149688169,0.430333232356058,0.665320713092027,0,0,0,0,0,0.733448665097199,0.406896178315738,1.33151354837103,5.03184483977566,0.961705476909699|short_description=p3@PARVG}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14654 | |||
|TSSclassifier=S | |||
|UniProt=Q9HBI0 | |||
|association_with_transcript=0bp_to_ENST00000415224,NM_001137606,uc003beq.2,uc011aqf.1_5end | |||
|coexpression_cluster_id=C805 | |||
|description=CAGE_peak_3_at_PARVG_5end | |||
|id=chr22:44577237..44577262,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.94e-74!172;CL:0000566!1.94e-74!172;CL:0002032!2.01e-68!165;CL:0000837!2.01e-68!165;CL:0000988!3.79e-67!182;CL:0000738!1.15e-61!140;CL:0002087!3.92e-52!119;CL:0002031!1.72e-51!124;CL:0000763!1.62e-46!112;CL:0000049!1.62e-46!112;CL:0000766!6.11e-35!76;CL:0000557!9.35e-34!71;CL:0000839!2.45e-31!70;CL:0002009!2.66e-31!65;CL:0002194!1.66e-30!63;CL:0000576!1.66e-30!63;CL:0000040!1.66e-30!63;CL:0000559!1.66e-30!63;CL:0002057!1.06e-27!42;CL:0000860!1.18e-24!45;CL:0000542!3.19e-18!53;CL:0000051!3.19e-18!53;CL:0000838!5.90e-18!52;CL:0000791!2.89e-13!18;CL:0000789!2.89e-13!18;CL:0002420!2.89e-13!18;CL:0002419!2.89e-13!18;CL:0000790!2.89e-13!18;CL:0000134!1.92e-11!358;CL:0002320!1.85e-10!365;CL:0000084!1.19e-09!25;CL:0000827!1.19e-09!25;CL:0000625!1.35e-09!11;CL:0000236!1.11e-08!14;CL:0000945!7.04e-08!24;CL:0000826!7.04e-08!24;CL:0000219!1.18e-07!390;CL:0000451!6.73e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-25;33!CL:0002057;2.19e-25;33!CL:0000576;6.62e-25;48!CL:0000473;1.51e-23;39!CL:0000234;1.51e-23;39!CL:0000766;8.50e-20;69!CL:0000763;2.96e-18;100!CL:0002087;2.19e-17;104!CL:0000791;3.97e-17;18!CL:0000789;3.97e-17;18!CL:0002419;3.97e-17;18!CL:0000738;1.82e-14;136!CL:0000084;3.62e-13;25!CL:0000988;4.82e-13;177!CL:0000625;2.86e-12;11!CL:0000236;4.32e-11;13!CL:0000542;1.11e-10;53!CL:0000219;2.60e-07;193!CL:0002393;4.56e-07;6!CL:0002397;4.56e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.67e-84,168;CL:0000988,3.92e-78,177;CL:0002032,5.39e-78,161;CL:0000837,5.39e-78,161;CL:0000738,4.83e-71,136;CL:0002087,3.25e-64,115;CL:0002031,1.17e-62,120;CL:0000763,2.17e-56,108;CL:0000049,2.17e-56,108;CL:0000766,4.70e-48,72;CL:0000557,2.48e-46,67;CL:0000839,2.00e-43,66;CL:0002194,3.04e-43,59;CL:0000576,3.04e-43,59;CL:0000040,3.04e-43,59;CL:0000559,3.04e-43,59;CL:0002009,7.63e-43,61;CL:0000473,4.11e-38,48;CL:0000234,4.11e-38,48;CL:0000860,3.36e-35,42;CL:0002057,3.36e-35,42;CL:0000134,1.09e-19,354;CL:0002320,1.29e-18,361;CL:0000838,1.49e-18,52;CL:0000542,5.55e-18,53;CL:0000051,5.55e-18,53;CL:0000791,2.57e-17,18;CL:0000789,2.57e-17,18;CL:0002420,2.57e-17,18;CL:0002419,2.57e-17,18;CL:0000790,2.57e-17,18;CL:0000219,6.68e-15,386;CL:0000084,2.53e-13,25;CL:0000827,2.53e-13,25;CL:0000625,2.23e-12,11;CL:0000236,1.41e-11,14;CL:0000034,1.10e-10,441;CL:0000048,1.52e-10,427;CL:0000723,5.79e-10,433;CL:0002393,2.59e-08,9;CL:0002397,2.59e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-25;42!CL:0000790;3.97e-17;18!CL:0000049;3.09e-15;108!CL:0000051;1.11e-10;53 | |||
|ontology_enrichment_disease=DOID:8692!7.94e-12!31;DOID:1240!6.81e-11!39;DOID:2531!1.09e-07!51;DOID:0060083!1.09e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.70e-13;31!DOID:1240;2.29e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.82e-13,31;DOID:1240,5.20e-12,39;DOID:2531,1.73e-07,51;DOID:0060083,1.73e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.73e-38!102;UBERON:0003061!2.73e-38!102;UBERON:0002193!3.51e-34!112;UBERON:0002371!1.63e-28!80;UBERON:0001474!1.60e-25!86;UBERON:0002405!3.27e-20!115;UBERON:0004765!2.45e-19!101;UBERON:0001434!2.45e-19!101;UBERON:0007023!9.96e-19!115;UBERON:0002384!5.21e-10!375;UBERON:0000178!1.19e-07!15;UBERON:0000179!1.19e-07!15;UBERON:0000463!1.19e-07!15;UBERON:0003081!3.90e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.05e-10;15!UBERON:0000179;3.05e-10;15!UBERON:0000463;3.05e-10;15!UBERON:0002390;1.09e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.55e-54,98;UBERON:0003061,2.55e-54,98;UBERON:0002193,1.07e-49,108;UBERON:0002371,2.97e-40,76;UBERON:0002405,8.41e-40,93;UBERON:0001474,8.68e-36,82;UBERON:0004765,8.69e-31,90;UBERON:0001434,1.04e-25,100;UBERON:0002384,3.64e-17,371;UBERON:0003081,3.58e-15,203;UBERON:0000178,2.38e-10,15;UBERON:0000179,2.38e-10,15;UBERON:0000463,2.38e-10,15;UBERON:0002204,2.11e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.382067028739756,0.246301768349837,0.0787107813136792,3.14691421479123,3.83829398097213,5.57338043937874,0,0,0,0,0.710846162437108,7.63361142270603,5.53995408531877,7.2196001089251,9.11445657006578,3.80656306207871,0.647787332037959,3.09090681161024,3.63495596948912,1.88937971844405,3.88134497900506,5.34586784883075,4.11167888021826,2.16794459626573,5.17846306179871,5.12321413058201,2.36482229888585,9.3081333798887,2.5819387343353,5.41705946377367,4.51781614902251,4.63940455098338,2.69668181334102,5.50951006267625,4.17207735198922,7.67204550958849,1.9791078011203,3.39088217956774,0.852449501065388,4.93355705668593,6.80862269629368,3.73693349397345,5.52747063564835,6.77927793946262,5.2125322729228,4.23779651843358,6.62899744777616,4.43047342417238,3.59133986730301,2.33864729961548,5.2414661377094,8.87396186057311,10.2120287132224,9.96498637521897,1.14005097496499,1.79025009479181,1.0959849225878,5.27988733383968,10.9227722252426,9.7846017924991,5.54749289336459,8.80871171479227,8.04653415936277,14.542987201267,9.54053754535364,5.69212969109448,6.45960908308033,7.26319133437935,5.28685314316103,6.1655941927969,11.3255156453283,3.93419540227666,5.50215067848831,2.87842098599313,4.51403537554831,3.2592226663359,3.31413464014313,1.94826728407911,2.89667187901451,2.3568472597987,0.886135578334485,2.16643091012012,2.0494611156108,3.12142434143708,3.4531959966772,6.07970039128866,5.506258628966,6.07974908964448,5.88589821797369,6.27213142829861,3.96582699441482,3.44898444241729,3.09264700934367,4.04831507231205,3.50421955756506,3.90650072313851,6.65316431113862,9.33565738282191,7.6791966692651,4.99722906209383,6.39298580518846,4.10563998460523,9.27391018833769,5.61624411145365,7.67569340578835,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,1.29818957461873,1.39303789839414,4.25465473660369,15.2633999555419,10.8679033048224,13.0010125465348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18568910348575,5.6161023633417,3.86441021950693,0,0,0,0,0,0,0,2.0251139823042,4.35389042635621,6.77363781059719,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,4.21667878966063,0,0,0,0,0,0,2.91421374383171,7.88123040807709,3.66566877261179,3.46526197955321,0,0,0,0,0,1.49801404789436,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.6165768359324,5.1771408196468,6.93729125722388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.88287601553558,0,0,0,0,5.58192370155386,7.64637207142375,6.26611905891579,7.86164859010704,4.52498500394814,9.72709966789076,5.94034580961926,8.72437693923697,0,0,0,0.557409525377156,0,1.56512055366511,1.4348364545594,4.7899049143876,9.1922577663536,16.5105394524629,6.81706074576566,13.7590617275595,7.07527505002896,0.626719583092093,12.5317238545034,5.92521222305612,5.13881840331838,11.3007836026987,16.1821570322324,12.7096977559633,10.1389452221791,10.2891009630511,10.0109485027145,4.10315000344285,0,0,0.811367035427949,2.99764771198038,1.4098700508785,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0.994147647766298,0.422008249231538,0,0,0,0.796991953004279,4.14425873296722,0,0,0.861593638227486,0,0,0,18.9281776983943,0.591860433821602,4.7896618469388,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.110579259931225,0,0.438770794307945,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0,0,3.61054589708557,1.49590513710141,0,0,0,0,0.635746315921515,0,0,0,0,0,0.619202951523374,1.22206028986725,0,0,0,1.68502832451693,0,0.234264445725339,0,0,0,0.394584402849391,2.41981432097328,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0.253243183823515,0,0,1.28071796843612,0,0,0,0,0,1.98804056904692,0,0,0,0,0,1.80126086612937,1.77976992559591,40.8789081814311,0,0,0.279282401272254,0,2.15361907373044,0.199679000498991,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,3.18091875923721,0.953423842781029,0,0,0,2.0247650239635,0.77380195455795,0.303747783290123,0,0.157611414598396,0.157363764404994,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,1.42211251997706,0.52893040697076,0,0,1.38823636338003,0.471612915298998,2.48543433208317,2.48083010905975,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,1.14681839138014,1.77486482458964,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.5314593612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| |||
|short_description=p3@PARVG | |||
}} |
Revision as of 12:19, 12 September 2013
Short description: | p3@PARVG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PARVG_5end |
Coexpression cluster: | C805_granulocyte_acute_CD14_Eosinophils_Dendritic_Peripheral_Basophils |
Association with transcript: | 0bp_to_ENST00000415224, NM_001137606, uc003beq.2, uc011aqf.1_5end |
EntrezGene: | PARVG |
HGNC: | 14654 |
UniProt: | Q9HBI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.55e-54 | 98 |
blood island | 2.55e-54 | 98 |
hemolymphoid system | 1.07e-49 | 108 |
bone marrow | 2.97e-40 | 76 |
immune system | 8.41e-40 | 93 |
bone element | 8.68e-36 | 82 |
skeletal element | 8.69e-31 | 90 |
skeletal system | 1.04e-25 | 100 |
connective tissue | 3.64e-17 | 371 |
lateral plate mesoderm | 3.58e-15 | 203 |
blood | 2.38e-10 | 15 |
haemolymphatic fluid | 2.38e-10 | 15 |
organism substance | 2.38e-10 | 15 |
musculoskeletal system | 2.11e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.82e-13 | 31 |
leukemia | 5.20e-12 | 39 |
hematologic cancer | 1.73e-07 | 51 |
immune system cancer | 1.73e-07 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.