FFCP PHASE1:Hg19::chr22:44577702..44577713,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64098|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14654|TSSclassifier=S|UniProt=|association_with_transcript=-27bp_to_ENST00000466375_5end|description=CAGE_peak_9_at_PARVG_5end|id=chr22:44577702..44577713,+|ontology_enrichment_celltype=CL:0000037!4.06e-58!172;CL:0000566!4.06e-58!172;CL:0000763!2.59e-53!112;CL:0000049!2.59e-53!112;CL:0000988!7.16e-53!182;CL:0002032!1.04e-52!165;CL:0000837!1.04e-52!165;CL:0000766!4.84e-50!76;CL:0000738!2.79e-48!140;CL:0002194!1.52e-47!63;CL:0000576!1.52e-47!63;CL:0000040!1.52e-47!63;CL:0000559!1.52e-47!63;CL:0002009!3.76e-47!65;CL:0000557!1.20e-46!71;CL:0002087!2.30e-44!119;CL:0000839!9.16e-44!70;CL:0002057!1.46e-42!42;CL:0002031!1.87e-39!124;CL:0000860!1.27e-38!45;CL:0002393!1.71e-11!9;CL:0002397!1.71e-11!9;CL:0000134!5.84e-11!358;CL:0002320!3.33e-10!365;CL:0000219!5.07e-08!390|ontology_enrichment_celltype_v019=CL:0000473;2.59e-31;39!CL:0000234;2.59e-31;39!CL:0000576;9.94e-31;48!CL:0000860;6.73e-26;33!CL:0002057;6.73e-26;33!CL:0000766;4.11e-21;69!CL:0000763;3.02e-16;100!CL:0000235;6.73e-13;6!CL:0000875;5.67e-11;3!CL:0002396;5.67e-11;3!CL:0000784;1.27e-10;3!CL:0000738;1.46e-09;136!CL:0002393;3.54e-09;6!CL:0002397;3.54e-09;6!CL:0002087;4.06e-08;104!CL:0000771;2.17e-07;2!CL:0000988;4.32e-07;177|ontology_enrichment_celltype_v019_2=CL:0000766,4.91e-56,72;CL:0002194,1.36e-55,59;CL:0000576,1.36e-55,59;CL:0000040,1.36e-55,59;CL:0000559,1.36e-55,59;CL:0000473,4.06e-55,48;CL:0000234,4.06e-55,48;CL:0002009,1.72e-53,61;CL:0000763,1.47e-52,108;CL:0000049,1.47e-52,108;CL:0000557,2.97e-51,67;CL:0000839,8.62e-49,66;CL:0000860,2.08e-44,42;CL:0002057,2.08e-44,42;CL:0000037,3.90e-44,168;CL:0000988,2.96e-41,177;CL:0002032,1.24e-38,161;CL:0000837,1.24e-38,161;CL:0000738,1.56e-37,136;CL:0002087,2.95e-33,115;CL:0002031,1.02e-29,120;CL:0002393,9.61e-18,9;CL:0002397,9.61e-18,9;CL:0000134,3.93e-15,354;CL:0002320,1.37e-14,361;CL:0000219,1.10e-12,386;CL:0000235,1.90e-12,6;CL:0000875,4.62e-11,3;CL:0002396,4.62e-11,3;CL:0000034,4.84e-11,441;CL:0000784,1.04e-10,3;CL:0000048,2.32e-10,427;CL:0000723,4.85e-10,433;CL:0000771,2.36e-07,2|ontology_enrichment_development_v019=CL:0002057;9.95e-32;42!CL:0000049;4.03e-19;108|ontology_enrichment_disease=DOID:1240!3.32e-09!39;DOID:8692!9.06e-09!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.52e-47!102;UBERON:0003061!1.52e-47!102;UBERON:0002193!2.94e-42!112;UBERON:0002371!7.09e-41!80;UBERON:0001474!1.72e-36!86;UBERON:0002405!1.69e-29!115;UBERON:0004765!6.17e-29!101;UBERON:0001434!6.17e-29!101;UBERON:0003081!2.14e-11!216;UBERON:0007023!1.34e-10!115;UBERON:0002384!5.00e-10!375;UBERON:0002204!6.31e-10!167|ontology_enrichment_uberon_v019=UBERON:0002390;2.75e-07;32!UBERON:0000178;8.81e-07;15!UBERON:0000179;8.81e-07;15!UBERON:0000463;8.81e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.63e-53,98;UBERON:0003061,1.63e-53,98;UBERON:0002193,1.48e-47,108;UBERON:0002371,4.28e-47,76;UBERON:0001474,5.66e-43,82;UBERON:0002405,1.96e-41,93;UBERON:0004765,2.51e-38,90;UBERON:0001434,1.48e-33,100;UBERON:0003081,3.77e-20,203;UBERON:0002204,2.40e-16,167;UBERON:0002384,7.49e-14,371;UBERON:0000926,3.47e-09,315;UBERON:0004120,3.47e-09,315;UBERON:0006603,3.47e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,2.30297638858328,1.39334510984468,0,0,0,0,0,3.81680571135301,1.66198622559563,0.601633342410425,0.217010870715852,3.13481663935894,0.971680998056939,0.77272670290256,0.872389432677388,1.88937971844405,1.4555043671269,1.62700325833979,0.822335776043652,0.619412741790207,2.01384674625505,0.768482119587302,2.83778675866302,0.344745680736619,1.93645405075148,0,1.12945403725563,1.91034305040492,1.34834090667051,1.83650335422542,0.962787081228281,0.639337125799041,1.9791078011203,0.598390972864896,1.70489900213078,2.03146467040009,2.26954089876456,0.622822248995575,0.502497330513487,0.521482918420201,1.08594422352558,0.605399502633369,1.47311054395026,0.949387162322653,4.22510572623884,3.18906449947565,4.19317291016752,2.3589012540764,1.80212271409808,2.89306056054744,4.56020389985998,3.77941686678271,2.55729815270488,1.75996244461323,0.546138611262131,1.77901850772711,0,2.00197993518006,0.574752439954483,0,1.90810750907073,0,0.587237189370939,0,1.32171328579026,0.560508562981536,2.63384084775077,0,0,0,0.167186495390678,0.32592226663359,0,0,0.557052284425868,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0.752875595388864,0.127986611154418,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.870648686496336,0.132957960518865,3.10037811596945,1.71598473234038,5.57186251994347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14654 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_ENST00000466375_5end | |||
|description=CAGE_peak_9_at_PARVG_5end | |||
|id=chr22:44577702..44577713,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.06e-58!172;CL:0000566!4.06e-58!172;CL:0000763!2.59e-53!112;CL:0000049!2.59e-53!112;CL:0000988!7.16e-53!182;CL:0002032!1.04e-52!165;CL:0000837!1.04e-52!165;CL:0000766!4.84e-50!76;CL:0000738!2.79e-48!140;CL:0002194!1.52e-47!63;CL:0000576!1.52e-47!63;CL:0000040!1.52e-47!63;CL:0000559!1.52e-47!63;CL:0002009!3.76e-47!65;CL:0000557!1.20e-46!71;CL:0002087!2.30e-44!119;CL:0000839!9.16e-44!70;CL:0002057!1.46e-42!42;CL:0002031!1.87e-39!124;CL:0000860!1.27e-38!45;CL:0002393!1.71e-11!9;CL:0002397!1.71e-11!9;CL:0000134!5.84e-11!358;CL:0002320!3.33e-10!365;CL:0000219!5.07e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.59e-31;39!CL:0000234;2.59e-31;39!CL:0000576;9.94e-31;48!CL:0000860;6.73e-26;33!CL:0002057;6.73e-26;33!CL:0000766;4.11e-21;69!CL:0000763;3.02e-16;100!CL:0000235;6.73e-13;6!CL:0000875;5.67e-11;3!CL:0002396;5.67e-11;3!CL:0000784;1.27e-10;3!CL:0000738;1.46e-09;136!CL:0002393;3.54e-09;6!CL:0002397;3.54e-09;6!CL:0002087;4.06e-08;104!CL:0000771;2.17e-07;2!CL:0000988;4.32e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.91e-56,72;CL:0002194,1.36e-55,59;CL:0000576,1.36e-55,59;CL:0000040,1.36e-55,59;CL:0000559,1.36e-55,59;CL:0000473,4.06e-55,48;CL:0000234,4.06e-55,48;CL:0002009,1.72e-53,61;CL:0000763,1.47e-52,108;CL:0000049,1.47e-52,108;CL:0000557,2.97e-51,67;CL:0000839,8.62e-49,66;CL:0000860,2.08e-44,42;CL:0002057,2.08e-44,42;CL:0000037,3.90e-44,168;CL:0000988,2.96e-41,177;CL:0002032,1.24e-38,161;CL:0000837,1.24e-38,161;CL:0000738,1.56e-37,136;CL:0002087,2.95e-33,115;CL:0002031,1.02e-29,120;CL:0002393,9.61e-18,9;CL:0002397,9.61e-18,9;CL:0000134,3.93e-15,354;CL:0002320,1.37e-14,361;CL:0000219,1.10e-12,386;CL:0000235,1.90e-12,6;CL:0000875,4.62e-11,3;CL:0002396,4.62e-11,3;CL:0000034,4.84e-11,441;CL:0000784,1.04e-10,3;CL:0000048,2.32e-10,427;CL:0000723,4.85e-10,433;CL:0000771,2.36e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;9.95e-32;42!CL:0000049;4.03e-19;108 | |||
|ontology_enrichment_disease=DOID:1240!3.32e-09!39;DOID:8692!9.06e-09!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.52e-47!102;UBERON:0003061!1.52e-47!102;UBERON:0002193!2.94e-42!112;UBERON:0002371!7.09e-41!80;UBERON:0001474!1.72e-36!86;UBERON:0002405!1.69e-29!115;UBERON:0004765!6.17e-29!101;UBERON:0001434!6.17e-29!101;UBERON:0003081!2.14e-11!216;UBERON:0007023!1.34e-10!115;UBERON:0002384!5.00e-10!375;UBERON:0002204!6.31e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;2.75e-07;32!UBERON:0000178;8.81e-07;15!UBERON:0000179;8.81e-07;15!UBERON:0000463;8.81e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.63e-53,98;UBERON:0003061,1.63e-53,98;UBERON:0002193,1.48e-47,108;UBERON:0002371,4.28e-47,76;UBERON:0001474,5.66e-43,82;UBERON:0002405,1.96e-41,93;UBERON:0004765,2.51e-38,90;UBERON:0001434,1.48e-33,100;UBERON:0003081,3.77e-20,203;UBERON:0002204,2.40e-16,167;UBERON:0002384,7.49e-14,371;UBERON:0000926,3.47e-09,315;UBERON:0004120,3.47e-09,315;UBERON:0006603,3.47e-09,315 | |||
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|short_description=p9@PARVG | |||
}} |
Revision as of 12:19, 12 September 2013
Short description: | p9@PARVG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PARVG_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000466375_5end |
EntrezGene: | PARVG |
HGNC: | 14654 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.63e-53 | 98 |
blood island | 1.63e-53 | 98 |
hemolymphoid system | 1.48e-47 | 108 |
bone marrow | 4.28e-47 | 76 |
bone element | 5.66e-43 | 82 |
immune system | 1.96e-41 | 93 |
skeletal element | 2.51e-38 | 90 |
skeletal system | 1.48e-33 | 100 |
lateral plate mesoderm | 3.77e-20 | 203 |
musculoskeletal system | 2.40e-16 | 167 |
connective tissue | 7.49e-14 | 371 |
mesoderm | 3.47e-09 | 315 |
mesoderm-derived structure | 3.47e-09 | 315 |
presumptive mesoderm | 3.47e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.