FFCP PHASE1:Hg19::chr2:207630033..207630061,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=130752 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17836 | |||
|TSSclassifier=S | |||
|UniProt=C9JER5,Q5I0G3 | |||
|association_with_transcript=0bp_to_ENST00000449792,NM_001039845,uc002vbs.2,uc002vbt.2,uc010fui.2,uc010fuj.2,uc010ziw.1_5end | |||
|coexpression_cluster_id=C596 | |||
|description=CAGE_peak_2_at_MDH1B_5end | |||
|id=chr2:207630033..207630061,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.61e-15;82!UBERON:0002532;5.51e-08;206!UBERON:0010316;5.51e-08;206 | |||
|ontology_enrichment_disease=DOID:305!1.95e-08!106;DOID:0050687!2.18e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.57e-31!94;UBERON:0001016!7.57e-31!94;UBERON:0005743!9.65e-28!86;UBERON:0001017!1.79e-27!82;UBERON:0002346!5.80e-27!90;UBERON:0001049!1.05e-26!57;UBERON:0005068!1.05e-26!57;UBERON:0006241!1.05e-26!57;UBERON:0007135!1.05e-26!57;UBERON:0003075!5.30e-26!86;UBERON:0007284!5.30e-26!86;UBERON:0000955!2.19e-25!69;UBERON:0006238!2.19e-25!69;UBERON:0003080!2.30e-24!42;UBERON:0002780!4.14e-24!41;UBERON:0001890!4.14e-24!41;UBERON:0006240!4.14e-24!41;UBERON:0002616!3.77e-23!59;UBERON:0000924!1.43e-22!173;UBERON:0006601!1.43e-22!173;UBERON:0004121!1.37e-21!169;UBERON:0003056!5.27e-21!61;UBERON:0001893!1.04e-19!34;UBERON:0000153!1.09e-19!129;UBERON:0007811!1.09e-19!129;UBERON:0000033!1.13e-19!123;UBERON:0002020!1.88e-19!34;UBERON:0003528!1.88e-19!34;UBERON:0002791!5.23e-19!33;UBERON:0001869!8.22e-19!32;UBERON:0007023!4.72e-18!115;UBERON:0002619!2.27e-14!22;UBERON:0000956!4.45e-14!25;UBERON:0000203!4.45e-14!25;UBERON:0001950!3.19e-13!20;UBERON:0000475!1.08e-11!365;UBERON:0000119!3.44e-10!312;UBERON:0000483!4.15e-10!309;UBERON:0000481!2.30e-09!347;UBERON:0000025!7.37e-09!194;UBERON:0000064!6.44e-08!219;UBERON:0000477!9.02e-08!286;UBERON:0000922!1.20e-07!612;UBERON:0002420!4.47e-07!9;UBERON:0007245!4.47e-07!9;UBERON:0010009!4.47e-07!9;UBERON:0010011!4.47e-07!9;UBERON:0000454!4.47e-07!9;UBERON:0000062!4.69e-07!511;UBERON:0004111!5.89e-07!241;UBERON:0002308!7.03e-07!9;UBERON:0000125!7.03e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.22e-31;41!UBERON:0001890;1.22e-31;41!UBERON:0001869;8.85e-31;32!UBERON:0001893;3.39e-30;34!UBERON:0003528;1.53e-29;34!UBERON:0002020;1.53e-29;34!UBERON:0002791;1.07e-28;32!UBERON:0000073;9.46e-27;53!UBERON:0002616;9.46e-27;53!UBERON:0002619;3.60e-26;22!UBERON:0000956;1.55e-24;25!UBERON:0000203;1.55e-24;25!UBERON:0001950;1.46e-23;20!UBERON:0001017;7.26e-19;75!UBERON:0000955;4.20e-18;68!UBERON:0001016;7.03e-17;83!UBERON:0002420;1.60e-11;9!UBERON:0007245;1.60e-11;9!UBERON:0010009;1.60e-11;9!UBERON:0010011;1.60e-11;9!UBERON:0000454;1.60e-11;9!UBERON:0001894;2.43e-11;7!UBERON:0000125;3.17e-11;9!UBERON:0002308;3.17e-11;9!UBERON:0007023;6.27e-11;114!UBERON:0002298;5.07e-10;6!UBERON:0009663;6.04e-09;7!UBERON:0002021;1.19e-08;5!UBERON:0000349;1.93e-08;5!UBERON:0000369;4.39e-08;4!UBERON:0002435;4.39e-08;4!UBERON:0000204;4.39e-08;4!UBERON:0001872;6.90e-08;5!UBERON:0003296;8.38e-08;4!UBERON:0010133;8.38e-08;4!UBERON:0001871;1.11e-07;6!UBERON:0011216;6.50e-07;132!UBERON:0000200;9.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.72e-49,56;UBERON:0005068,1.72e-49,56;UBERON:0006241,1.72e-49,56;UBERON:0007135,1.72e-49,56;UBERON:0001016,6.62e-49,89;UBERON:0000073,2.72e-48,53;UBERON:0002616,2.72e-48,53;UBERON:0001017,1.38e-46,81;UBERON:0000955,1.14e-45,68;UBERON:0006238,1.14e-45,68;UBERON:0002780,6.82e-45,41;UBERON:0001890,6.82e-45,41;UBERON:0003080,6.82e-45,41;UBERON:0006240,6.82e-45,41;UBERON:0002346,1.57e-42,86;UBERON:0003075,4.31e-42,82;UBERON:0007284,4.31e-42,82;UBERON:0003056,4.92e-37,61;UBERON:0001893,3.81e-35,34;UBERON:0001869,4.85e-35,32;UBERON:0003528,1.28e-34,34;UBERON:0002020,1.28e-34,34;UBERON:0010371,4.91e-34,104;UBERON:0007023,7.62e-33,114;UBERON:0002791,3.45e-32,32;UBERON:0004121,2.95e-28,171;UBERON:0000924,2.95e-28,171;UBERON:0006601,2.95e-28,171;UBERON:0002619,3.30e-26,22;UBERON:0010314,1.84e-25,132;UBERON:0000956,1.24e-24,25;UBERON:0000203,1.24e-24,25;UBERON:0001950,1.21e-23,20;UBERON:0011216,1.48e-22,223;UBERON:0000025,3.82e-15,192;UBERON:0002420,8.32e-12,9;UBERON:0007245,8.32e-12,9;UBERON:0010009,8.32e-12,9;UBERON:0010011,8.32e-12,9;UBERON:0000454,8.32e-12,9;UBERON:0000125,2.09e-11,9;UBERON:0002308,2.09e-11,9;UBERON:0000483,2.61e-11,306;UBERON:0001894,3.22e-11,7;UBERON:0006222,3.22e-11,7;UBERON:0000119,5.23e-11,309;UBERON:0002298,4.17e-10,6;UBERON:0004111,6.37e-10,240;UBERON:0009663,4.96e-09,7;UBERON:0000349,1.34e-08,5;UBERON:0002021,1.90e-08,5;UBERON:0000369,3.89e-08,4;UBERON:0002435,3.89e-08,4;UBERON:0000204,3.89e-08,4;UBERON:0010082,3.89e-08,4;UBERON:0001872,5.37e-08,5;UBERON:0001871,7.23e-08,6;UBERON:0003296,1.25e-07,4;UBERON:0010133,1.25e-07,4;UBERON:0000922,3.06e-07,592;UBERON:0003076,3.51e-07,15;UBERON:0003057,3.51e-07,15;UBERON:0004732,7.83e-07,13 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0.487932798790507,0.369363174230364,0,0.313454721478088,1.43117993565528,0.136874425072884,0.251085279189606,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,0,0,1.78174561334694,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0.289648807765598,2.43806866313962,0.670700859703636,0.383587685530591,0,0.50133791063589,1.01392563272577,0.795285947051099,0.486634870302636,1.51255707462509,0.443458794925128,0.790513071238134,6.02503747289478,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.633152558322899,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.70296429550139,0,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0,0.168336113954066,0.625592599359821,0.554128230968366,0,0,0,0.340296549480063,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0,0.744467425326359,0,0,0,0.920498986422993,0.969876340912871,0.710019185033229,0.201504196455281,0.169560592310488,0,0.545492241181669,0,0.609868530647977,0.530119073285941,1.04574548582567,0.518305275076852,0.504641701751257,0.72995471815166,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.220587945464788,0,0.237270619111097,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0.982827216677626,0,0.882926198829301,0.122988438543114,0.857839051492628,0,0,0.100528972411631,0.0925884451585296,0.651616610620649,0,0,1.39116485970092,0.352226082707465,0,0,0,1.58040879591855,0,0.492434012174795,0,0.297262324577456,0.93733833986777,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0.825472625798197,0.381988425558278,0,0,0.205654985406647,0,0.857479297891735,0.336393253036082,0,0.7333828582095,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,1.01637849688985,0,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,0,0.178428988797162,0.315404830067869,0.585707074963566,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0.955719759148911,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.512556597022804,0,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0,0.241718899183244,0.40101294060657,0,0.34444334449382,0,0.524497659837696,0,0.308061348417659,0,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0,1.62689197332152,0.206082023295445,0.0915694648183434,0.247528499761764,0,0,1.6068392984416,0.48335359146061,0.154048617114644,0.460511024178389,0,1.28904293841928,0,0.0852266274161009,0.267096106940212,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0.532306030317022,0,0,0.429374660225974,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.430234056612155,0,0.35667105148125,0.354761064070598,0.211107635297664,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0.282431402330337,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,3.09789806269672,0,0.245040215981032,0.185803175125719,0.865615277858669,0.284567373393656,0.318852545457645,0,0.191505370132367,0.211673582723883,0,0,0,0.313359791546046,2.50634477090067,0,0,0,0,0,0.307240764308458,0,0,0,1.11362469558097,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0.970884173996107,0.222886768554957,0.852408440419239,0.47748896947538,0.593929361665277,0.921482106297696,2.98244294329889,2.67271891179974,0.111308705022906,0.659215496907038,8.23389091699175,1.39473591775749,0,3.27512572210559,0,0.123084805461069,0,0.0898683511473268,0,0,0.394573622547734,0,0,1.93866549219044,3.52518773015035,0,0,0.787139999965761,0.724999575434793,0.227586896570999,2.2882828526349,1.41832609060762,0,0,1.90987494426621,5.31444831488303,3.85908603601305,0,1.43753037910592,0.886642856860642,3.29078095730959,0.21787692703798,0.139423744278603,0.538651809526579,0.113942055847001,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0.225595660617181,0,0,0,0,0.843992258112108,3.26465616318295,0.141353071433941,1.29833183845255,0,0.530745387020035,0,1.18608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| |||
|short_description=p2@MDH1B | |||
}} |
Revision as of 16:13, 12 September 2013
Short description: | p2@MDH1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MDH1B_5end |
Coexpression cluster: | C596_testis_medulla_pituitary_caudate_amygdala_hippocampus_putamen |
Association with transcript: | 0bp_to_ENST00000449792, NM_001039845, uc002vbs.2, uc002vbt.2, uc010fui.2, uc010fuj.2, uc010ziw.1_5end |
EntrezGene: | MDH1B |
HGNC: | 17836 |
UniProt: | C9JER5Q5I0G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.