FFCP PHASE1:Hg19::chr2:24583314..24583433,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50618|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6184|TSSclassifier=S|UniProt=E7EPJ2,F8W719,C9JP63,A6H8W8,Q9NZM3,E9PBE9,E7EUQ1|association_with_transcript=0bp_to_ENST00000380868,ENST00000406921,ENST00000407704,ENST00000412011,ENST00000443927,ENST00000445614,NM_006277,NM_019595,NM_147152,uc002rfe.2,uc002rff.2,uc002rfg.2,uc010eyd.2_5end|coexpression_cluster_id=C509|description=CAGE_peak_1_at_ITSN2_5end|id=chr2:24583314..24583433,-|ontology_enrichment_celltype=CL:0000738!8.55e-53!140;CL:0000037!9.77e-51!172;CL:0000566!9.77e-51!172;CL:0002032!1.46e-48!165;CL:0000837!1.46e-48!165;CL:0000988!4.65e-45!182;CL:0002031!6.89e-45!124;CL:0002087!4.39e-43!119;CL:0000766!2.74e-33!76;CL:0000763!3.01e-31!112;CL:0000049!3.01e-31!112;CL:0000557!2.15e-30!71;CL:0000839!9.31e-28!70;CL:0002009!6.69e-27!65;CL:0002194!9.20e-26!63;CL:0000576!9.20e-26!63;CL:0000040!9.20e-26!63;CL:0000559!9.20e-26!63;CL:0002057!4.85e-25!42;CL:0000860!5.01e-23!45;CL:0000838!3.90e-15!52;CL:0000542!4.55e-15!53;CL:0000051!4.55e-15!53;CL:0000945!2.22e-08!24;CL:0000826!2.22e-08!24;CL:0000791!4.84e-08!18;CL:0000789!4.84e-08!18;CL:0002420!4.84e-08!18;CL:0002419!4.84e-08!18;CL:0000790!4.84e-08!18;CL:0000084!9.21e-07!25;CL:0000827!9.21e-07!25|ontology_enrichment_celltype_v019=CL:0000860;1.36e-18;33!CL:0002057;1.36e-18;33!CL:0000473;1.22e-16;39!CL:0000234;1.22e-16;39!CL:0000576;1.31e-16;48!CL:0000766;4.13e-15;69!CL:0002087;5.30e-13;104!CL:0000738;1.21e-11;136!CL:0000763;1.49e-09;100!CL:0000542;4.89e-09;53!CL:0000988;1.08e-08;177!CL:0000945;1.95e-08;24!CL:0000791;4.90e-08;18!CL:0000789;4.90e-08;18!CL:0002419;4.90e-08;18!CL:0000236;7.98e-07;13!CL:0000084;9.23e-07;25|ontology_enrichment_celltype_v019_2=CL:0000738,2.38e-54,136;CL:0000037,6.27e-52,168;CL:0002032,9.17e-50,161;CL:0000837,9.17e-50,161;CL:0000988,7.61e-47,177;CL:0002031,2.04e-46,120;CL:0002087,1.27e-44,115;CL:0000766,3.27e-35,72;CL:0000763,1.83e-32,108;CL:0000049,1.83e-32,108;CL:0000557,2.76e-32,67;CL:0000839,1.62e-29,66;CL:0002009,9.66e-29,61;CL:0002194,1.39e-27,59;CL:0000576,1.39e-27,59;CL:0000040,1.39e-27,59;CL:0000559,1.39e-27,59;CL:0000473,4.18e-26,48;CL:0000234,4.18e-26,48;CL:0000860,4.85e-25,42;CL:0002057,4.85e-25,42;CL:0000838,3.90e-15,52;CL:0000542,4.55e-15,53;CL:0000051,4.55e-15,53;CL:0000945,2.22e-08,24;CL:0000826,2.22e-08,24;CL:0000791,4.84e-08,18;CL:0000789,4.84e-08,18;CL:0002420,4.84e-08,18;CL:0002419,4.84e-08,18;CL:0000790,4.84e-08,18;CL:0000084,9.21e-07,25;CL:0000827,9.21e-07,25|ontology_enrichment_development_v019=CL:0002057;3.04e-18;42!CL:0000049;2.85e-09;108!CL:0000051;4.89e-09;53!CL:0000790;4.90e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.53e-34!102;UBERON:0003061!5.53e-34!102;UBERON:0002193!4.96e-32!112;UBERON:0002371!2.94e-25!80;UBERON:0001474!2.56e-24!86;UBERON:0007023!1.35e-22!115;UBERON:0002405!1.69e-20!115;UBERON:0004765!1.47e-19!101;UBERON:0001434!1.47e-19!101;UBERON:0000178!3.18e-07!15;UBERON:0000179!3.18e-07!15;UBERON:0000463!3.18e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;3.10e-07;15!UBERON:0000179;3.10e-07;15!UBERON:0000463;3.10e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.97e-35,98;UBERON:0003061,1.97e-35,98;UBERON:0002193,2.84e-33,108;UBERON:0002405,6.88e-27,93;UBERON:0002371,1.16e-26,76;UBERON:0001474,1.42e-25,82;UBERON:0004765,3.71e-23,90;UBERON:0007023,2.35e-22,114;UBERON:0001434,2.54e-20,100;UBERON:0000178,3.18e-07,15;UBERON:0000179,3.18e-07,15;UBERON:0000463,3.18e-07,15|phase1_expression=6.54042165374004,11.1332272423311,9.58489947852604,7.00513088471913,9.38618298297304,6.10636966870258,0,4.42203911398782,4.17897005119742,2.7030733015166,2.09340350391728,4.58726881473362,2.37390280405608,20.9165136502479,21.2094320465866,6.72325146451775,6.02694528023977,2.92124036154949,8.29485757943862,3.20114750999649,3.87601313364081,3.76145665773705,9.15955158819382,5.06435372769671,8.28581421325698,41.1104122923978,36.288460536876,38.4895720623892,36.976242023797,68.7054622594011,54.8049076538909,6.43594857135249,5.4217065380085,4.80680213216824,30.5220770286388,29.5712003573837,27.0112404188059,120.770999059949,112.505435030749,95.0507613735431,55.3071221372613,63.48315853972,64.909043043815,77.7880577470671,80.1097000620276,111.10350002402,83.4420242491408,88.4010959246925,77.1168863528808,59.8400176030073,89.4000865786561,73.3094912654614,66.1911707014308,106.504972791331,82.6101568225485,70.7791196680194,78.8698773667174,80.4510074313403,73.1540502766457,109.436798232948,114.441345518028,72.5672860410775,85.5699091196801,93.34322036666,81.5487960546321,109.50534836539,102.76567108427,65.3246529667532,67.7927793946262,73.4098295103294,69.015543300204,116.37573297207,102.217351143406,63.5878411798945,54.6393050910162,45.4959260753176,63.3533479666232,51.3604973517952,75.7017513343247,71.5381986790534,70.0186703740797,67.7684010466792,73.9184226737555,75.3671283541741,78.276814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551169429342,21.7895494362227,37.7158775225298,22.354705058898,10.0994503503448,9.12356978123378,16.6814029295813,16.5569893456081,11.7632909849086,8.43002830452387,5.65192011582218,5.97019211547496,9.34853239388898,4.99325275352352,10.9853743059552,5.28292593680408,16.0166019887376,12.1285236250369,9.07385542579434,4.50767881690063,8.7234538493884,11.6286640029503,9.8956684675993,9.31577741257556,6.63529932545369,9.83614343864581,7.82617592717601,10.8185478477997,12.947377213739,7.73054393088857,8.72873564172285,8.80766567748405,11.1368102370838,9.55430132876678,9.60066635191569,6.18112269329027,6.73498977531838,18.9277347342976,18.8767433799157,16.2975609444944,4.69789725537381,12.2421199776627,10.4185113445725,11.2578884072975,10.2080639416448,6.17602894321944,9.42921413188441,18.5523603243175,10.4173580666294,9.291834235919,11.5308683364576,6.56317649289277,4.86175929883811,34.5646090379327,17.9271484132237,26.8386977432993,35.3301251592624,10.1559053142388,12.288645437686,14.5805365117453,15.7990042725395,18.4576692370864,27.8988267050521,17.0254786070051,12.3350986668733,12.3093966793111,43.5454082023081,7.6736622782191,9.70423302570136,5.66157390681227,12.0130602011215,7.46823131797711,15.0928193272195,5.7010451559141,6.70373901567893,12.7201740261367,47.3959087457533,8.80627823114017,13.401685860246,8.88111884324281,22.5444580088573,22.6714522120936,44.0589450997737,19.0758218743902,13.3597998997511,16.5977405914123,23.7369199078821,39.9754376725632,17.9610324856877,11.796972334774,8.07085833495388,14.2096569364916,13.3483733413509,33.1372764508848,14.9187166587206,30.9114449515447,16.7415207023922,21.8823923145266,16.5001217523296,8.35236779301493,32.0847707090988,22.1523277548334,22.6512648598016,32.8632006436883,19.6589011601111,14.7683198434919,16.9959907725727,36.7196272008078,16.8836394585236,10.093231783528,35.8920230038452,43.3806001662283,28.5273833991217,51.4516552453933,25.6349849770026,19.0136079467036,19.8926090947405,29.2949549130145,16.6405117114008,13.3559040198884,14.7937764516452,44.8195560176435,26.3954191058883,12.0517030224929,39.2658249819083,23.1042522603925,25.7985911459007,25.4456497268897,7.1106125279727,8.02065835040064,12.3439373334831,21.6462068477168,9.73915971566273,12.1210118736704,30.41542511982,18.9300037880922,22.601412139538,24.4562471658783,41.0685438685201,13.2881983755549,6.2041277132864,2.8666168169323,12.7515192249483,25.028309571887,15.1178226978014,39.4931590684616,55.2325900886609,11.598144313382,28.1712375974301,16.3757624423474,11.7380957345207,11.297408623869,13.7794220087531,9.34494392336148,26.4184976241679,36.9664217337055,15.7362883562849,18.3423745580994,42.9009563069335,22.8606250688577,22.1828567839888,40.3983104444837,19.019507741253,15.1235132072157,54.3227045923554,42.6711218385081,38.3774038751727,24.2833356503694,15.5273743554904,22.9490308731021,28.4831191416142,34.8634255387451,35.1181978721056,4.25983217921598,16.5219321163923,14.8359234715728,27.5093957068008,8.18389039966853,11.092215087154,4.32626562123789,10.0933139868063,6.44666874585804,14.9504231193496,8.15910637935854,15.7658269106681,31.5199505404518,14.5410372789578,26.598323074602,15.8098836792145,36.4834553361863,39.511404419244,49.2570498191266,33.8051492678511,38.5595791720956,55.8051681519763,10.7646588077389,50.7904323059756,67.5071411120452,34.3992461677199,18.1383649575199,55.0939793659326,38.1562132689038,20.9576024623988,12.3732968288681,17.1831026863122,28.960842343041,13.6534307202012,16.4248659682418,33.860880038654,21.5654974507341,59.2523529025106,50.1171746041655,30.7745752611104|short_description=p1@ITSN2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=50618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6184 | |||
|TSSclassifier=S | |||
|UniProt=E7EPJ2,F8W719,C9JP63,A6H8W8,Q9NZM3,E9PBE9,E7EUQ1 | |||
|association_with_transcript=0bp_to_ENST00000380868,ENST00000406921,ENST00000407704,ENST00000412011,ENST00000443927,ENST00000445614,NM_006277,NM_019595,NM_147152,uc002rfe.2,uc002rff.2,uc002rfg.2,uc010eyd.2_5end | |||
|coexpression_cluster_id=C509 | |||
|description=CAGE_peak_1_at_ITSN2_5end | |||
|id=chr2:24583314..24583433,- | |||
|ontology_enrichment_celltype=CL:0000738!8.55e-53!140;CL:0000037!9.77e-51!172;CL:0000566!9.77e-51!172;CL:0002032!1.46e-48!165;CL:0000837!1.46e-48!165;CL:0000988!4.65e-45!182;CL:0002031!6.89e-45!124;CL:0002087!4.39e-43!119;CL:0000766!2.74e-33!76;CL:0000763!3.01e-31!112;CL:0000049!3.01e-31!112;CL:0000557!2.15e-30!71;CL:0000839!9.31e-28!70;CL:0002009!6.69e-27!65;CL:0002194!9.20e-26!63;CL:0000576!9.20e-26!63;CL:0000040!9.20e-26!63;CL:0000559!9.20e-26!63;CL:0002057!4.85e-25!42;CL:0000860!5.01e-23!45;CL:0000838!3.90e-15!52;CL:0000542!4.55e-15!53;CL:0000051!4.55e-15!53;CL:0000945!2.22e-08!24;CL:0000826!2.22e-08!24;CL:0000791!4.84e-08!18;CL:0000789!4.84e-08!18;CL:0002420!4.84e-08!18;CL:0002419!4.84e-08!18;CL:0000790!4.84e-08!18;CL:0000084!9.21e-07!25;CL:0000827!9.21e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-18;33!CL:0002057;1.36e-18;33!CL:0000473;1.22e-16;39!CL:0000234;1.22e-16;39!CL:0000576;1.31e-16;48!CL:0000766;4.13e-15;69!CL:0002087;5.30e-13;104!CL:0000738;1.21e-11;136!CL:0000763;1.49e-09;100!CL:0000542;4.89e-09;53!CL:0000988;1.08e-08;177!CL:0000945;1.95e-08;24!CL:0000791;4.90e-08;18!CL:0000789;4.90e-08;18!CL:0002419;4.90e-08;18!CL:0000236;7.98e-07;13!CL:0000084;9.23e-07;25 | |||
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|ontology_enrichment_disease= | |||
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|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@ITSN2 | |||
}} |
Revision as of 17:56, 12 September 2013
Short description: | p1@ITSN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ITSN2_5end |
Coexpression cluster: | C509_Neutrophils_Eosinophils_CD14_Whole_CD34_CD19_Peripheral |
Association with transcript: | 0bp_to_ENST00000380868, ENST00000406921, ENST00000407704, ENST00000412011, ENST00000443927, ENST00000445614, NM_006277, NM_019595, NM_147152, uc002rfe.2, uc002rff.2, uc002rfg.2, uc010eyd.2_5end |
EntrezGene: | ITSN2 |
HGNC: | 6184 |
UniProt: | E7EPJ2F8W719C9JP63A6H8W8Q9NZM3E9PBE9E7EUQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.97e-35 | 98 |
blood island | 1.97e-35 | 98 |
hemolymphoid system | 2.84e-33 | 108 |
immune system | 6.88e-27 | 93 |
bone marrow | 1.16e-26 | 76 |
bone element | 1.42e-25 | 82 |
skeletal element | 3.71e-23 | 90 |
adult organism | 2.35e-22 | 114 |
skeletal system | 2.54e-20 | 100 |
blood | 3.18e-07 | 15 |
haemolymphatic fluid | 3.18e-07 | 15 |
organism substance | 3.18e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.