FFCP PHASE1:Mm9::chr11:106576565..106576607,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18613|HGNC=|MCL_coexpression_id=94|UniProt=Q08481,E9Q0X6|association_with_transcript=0bp_to_ENSMUST00000080853,ENSMUST00000103069,ENSMUST00000165352,NM_001032378,NM_008816,uc007lzf.1,uc007lzg.1,uc007lzh.1_5end|description=CAGE_peak_1_at_Pecam1_5end|id=chr11:106576565..106576607,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!3.55e-10!85;UBERON:0002048!2.07e-09!14;UBERON:0000117!2.07e-09!14;UBERON:0000171!2.07e-09!14;UBERON:0000170!2.07e-09!14;UBERON:0005597!2.07e-09!14;UBERON:0000118!2.07e-09!14;UBERON:0005153!3.82e-09!17;UBERON:0009569!1.79e-08!66;UBERON:0000468!2.10e-08!333;UBERON:0005157!8.85e-08!27;UBERON:0000926!1.12e-07!193;UBERON:0004120!1.12e-07!193;UBERON:0006603!1.12e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.08e-11,79;UBERON:0002048,1.92e-09,14;UBERON:0000117,1.92e-09,14;UBERON:0000171,1.92e-09,14;UBERON:0000170,1.92e-09,14;UBERON:0005597,1.92e-09,14;UBERON:0000118,1.92e-09,14;UBERON:0005153,3.57e-09,17;UBERON:0009569,1.39e-08,66;UBERON:0002100,1.46e-07,90|phase1_expression=3.04282809499109,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,8.99396356902289,11.7435655086099,2.79824751251259,2.20823515750766,2.60517423850904,1.69755860719212,120.421298853915,0.198581902401771,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0.443461021310609,0.635030673459631,2.46025915033828,0,0,0,0,0.837063261473815,0,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,0,1.00828139742739,7.20326420900652,12.3209379173665,6.18806510732931,7.89034197352431,11.6378015439847,6.97214543856797,0,0,0.449949858640699,0,0,0.299600110518405,0,11.1984781293156,12.4205463265155,11.3575479129746,10.5690864229407,13.4729809980484,8.20688354740192,12.2682202903343,13.7882817991503,6.60695285996332,15.5778552463929,16.7431121249305,10.4190167306853,13.174220678747,7.29278718779464,13.6799669510677,10.6924895906019,12.9878510610289,15.9099436155781,14.9490264839058,13.7935589910722,5.45228591998925,4.45872204630035,731.617969483035,140.249091947966,1.3599426674155,1.61910957491345,5.19821133958135,4.92829575807069,64.0426555800788,0,0,0,0.704217098883403,0,0,0,0,0,0,39.5076223827948,170.381127439839,100.792212425016,58.8115257737201,98.9512804514459,76.7949605862675,82.7467296633898,95.7172076084637,73.3892893365305,75.6416601267184,273.148185221713,39.8074748377443,82.9863940230209,66.4732970565785,55.2757788574153,35.4144346314432,21.958559775866,15.4990563041957,25.5457055208591,7.42853771936706,5.39912457894067,6.22644112658017,30.407499799179,30.1950397860293,12.3141265070607,25.0307021076878,27.6172693916757,30.5448425502553,22.064811777215,67.4176588689094,76.8835078370375,17.6905930903572,26.3052319858092,28.4963770088321,19.0818746679783,25.0286360429435,31.3466021098287,24.7652856910833,28.0569047423821,20.6143794031403,49.92975055263,26.5148631307396,35.7410491517178,35.1902248327898,36.3864915829774,58.6679695866012,81.1427547996648,101.244811112708,36.0252022941473,4.91549231119264,6.69104558498259,10.2298859782413,76.8436616106712,85.1329597731379,86.0696653783651,119.556091470531,110.187969778546,120.174080939268,124.638194386219,123.674038045224,129.609530027558,110.090539592118,252.982062145886,244.584598399847,222.516380861356,250.506681547089,297.535630391744,25.4450837762594,19.2431625149262,6.27795687669216,18.5115396664481,45.4303973640048,48.5374644188317,51.4181170675152,59.9000068131327,63.377742495788,68.2909997744087,38.4368539851054,74.2792285805289,52.5290586392563,70.0326781584851,64.3381487493096,35.0539569375146,30.6916030822066,34.2522989997512,63.9180826211885,64.2076640866676,77.7683376144255,88.791978940557,93.6790513019632,76.2376362207763,127.421622305378,108.493458765008,111.469096767376,108.342709923341,35.2778626233707,24.859920751698,20.4421354917731,16.1900720917095,20.8945925030158,26.7706647325183,30.8097280655518,47.4698626793838,35.9940203440579,36.2421065408268,53.1942364151212,77.7774580627172,59.5991955648811,45.7167769084272,43.9523663128685,44.8672474867931,694.3024886461,44.7199731778344,119.616292708447,124.083657701663,174.140164230069,264.157367985743,421.57528800913,303.823089714593,510.107326327634,470.391000813998,375.834889725697,570.899788469631,511.492916286783,613.890604619935,0,0,74.7481694988935,83.8847708766387,38.6926921870579,33.9913891117389,0,173.699997916609,0,0,0,0,0,0,0,0,0,25.7057053137446,63.7310982585126,79.7733904429303,74.6022273839378,64.3383479592888,69.0274719367807,56.3251075879557,42.0229744181004,69.4066693501705,102.174454936747,107.602301780375,101.820747508279,88.7022299925113,102.6712449748,74.2686381149168,69.5762816594992,62.912681381394,33.0226417581174,30.9705081733854,48.1214303671847,44.5821032865712,70.4040727559826,71.3475270408282,78.4898828272117,70.9403331437016,149.485878036584,112.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| ||
|EntrezGene=18613 | |||
|HGNC= | |||
|MCL_coexpression_id=94 | |||
|UniProt=Q08481,E9Q0X6 | |||
|association_with_transcript=0bp_to_ENSMUST00000080853,ENSMUST00000103069,ENSMUST00000165352,NM_001032378,NM_008816,uc007lzf.1,uc007lzg.1,uc007lzh.1_5end | |||
|description=CAGE_peak_1_at_Pecam1_5end | |||
|id=chr11:106576565..106576607,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!3.55e-10!85;UBERON:0002048!2.07e-09!14;UBERON:0000117!2.07e-09!14;UBERON:0000171!2.07e-09!14;UBERON:0000170!2.07e-09!14;UBERON:0005597!2.07e-09!14;UBERON:0000118!2.07e-09!14;UBERON:0005153!3.82e-09!17;UBERON:0009569!1.79e-08!66;UBERON:0000468!2.10e-08!333;UBERON:0005157!8.85e-08!27;UBERON:0000926!1.12e-07!193;UBERON:0004120!1.12e-07!193;UBERON:0006603!1.12e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.08e-11,79;UBERON:0002048,1.92e-09,14;UBERON:0000117,1.92e-09,14;UBERON:0000171,1.92e-09,14;UBERON:0000170,1.92e-09,14;UBERON:0005597,1.92e-09,14;UBERON:0000118,1.92e-09,14;UBERON:0005153,3.57e-09,17;UBERON:0009569,1.39e-08,66;UBERON:0002100,1.46e-07,90 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,8.99396356902289,11.7435655086099,2.79824751251259,2.20823515750766,2.60517423850904,1.69755860719212,120.421298853915,0.198581902401771,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0.443461021310609,0.635030673459631,2.46025915033828,0,0,0,0,0.837063261473815,0,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,0,1.00828139742739,7.20326420900652,12.3209379173665,6.18806510732931,7.89034197352431,11.6378015439847,6.97214543856797,0,0,0.449949858640699,0,0,0.299600110518405,0,11.1984781293156,12.4205463265155,11.3575479129746,10.5690864229407,13.4729809980484,8.20688354740192,12.2682202903343,13.7882817991503,6.60695285996332,15.5778552463929,16.7431121249305,10.4190167306853,13.174220678747,7.29278718779464,13.6799669510677,10.6924895906019,12.9878510610289,15.9099436155781,14.9490264839058,13.7935589910722,5.45228591998925,4.45872204630035,731.617969483035,140.249091947966,1.3599426674155,1.61910957491345,5.19821133958135,4.92829575807069,64.0426555800788,0,0,0,0.704217098883403,0,0,0,0,0,0,39.5076223827948,170.381127439839,100.792212425016,58.8115257737201,98.9512804514459,76.7949605862675,82.7467296633898,95.7172076084637,73.3892893365305,75.6416601267184,273.148185221713,39.8074748377443,82.9863940230209,66.4732970565785,55.2757788574153,35.4144346314432,21.958559775866,15.4990563041957,25.5457055208591,7.42853771936706,5.39912457894067,6.22644112658017,30.407499799179,30.1950397860293,12.3141265070607,25.0307021076878,27.6172693916757,30.5448425502553,22.064811777215,67.4176588689094,76.8835078370375,17.6905930903572,26.3052319858092,28.4963770088321,19.0818746679783,25.0286360429435,31.3466021098287,24.7652856910833,28.0569047423821,20.6143794031403,49.92975055263,26.5148631307396,35.7410491517178,35.1902248327898,36.3864915829774,58.6679695866012,81.1427547996648,101.244811112708,36.0252022941473,4.91549231119264,6.69104558498259,10.2298859782413,76.8436616106712,85.1329597731379,86.0696653783651,119.556091470531,110.187969778546,120.174080939268,124.638194386219,123.674038045224,129.609530027558,110.090539592118,252.982062145886,244.584598399847,222.516380861356,250.506681547089,297.535630391744,25.4450837762594,19.2431625149262,6.27795687669216,18.5115396664481,45.4303973640048,48.5374644188317,51.4181170675152,59.9000068131327,63.377742495788,68.2909997744087,38.4368539851054,74.2792285805289,52.5290586392563,70.0326781584851,64.3381487493096,35.0539569375146,30.6916030822066,34.2522989997512,63.9180826211885,64.2076640866676,77.7683376144255,88.791978940557,93.6790513019632,76.2376362207763,127.421622305378,108.493458765008,111.469096767376,108.342709923341,35.2778626233707,24.859920751698,20.4421354917731,16.1900720917095,20.8945925030158,26.7706647325183,30.8097280655518,47.4698626793838,35.9940203440579,36.2421065408268,53.1942364151212,77.7774580627172,59.5991955648811,45.7167769084272,43.9523663128685,44.8672474867931,694.3024886461,44.7199731778344,119.616292708447,124.083657701663,174.140164230069,264.157367985743,421.57528800913,303.823089714593,510.107326327634,470.391000813998,375.834889725697,570.899788469631,511.492916286783,613.890604619935,0,0,74.7481694988935,83.8847708766387,38.6926921870579,33.9913891117389,0,173.699997916609,0,0,0,0,0,0,0,0,0,25.7057053137446,63.7310982585126,79.7733904429303,74.6022273839378,64.3383479592888,69.0274719367807,56.3251075879557,42.0229744181004,69.4066693501705,102.174454936747,107.602301780375,101.820747508279,88.7022299925113,102.6712449748,74.2686381149168,69.5762816594992,62.912681381394,33.0226417581174,30.9705081733854,48.1214303671847,44.5821032865712,70.4040727559826,71.3475270408282,78.4898828272117,70.9403331437016,149.485878036584,112.270997557825,18.3038570385618,40.7269044765456,109.311416873128,65.1982718473365,55.1500229294491,43.4973384324412,48.3858188805552,32.2640025498287,22.042343622923,96.1762804708617,100.190239307014,41.6294289980367,21.0509110690379,20.8188137617936,7.9889862097112,8.39708713941948,8.01559848065658,53.4615546088464,36.8531432522023,52.0497835844733,46.9823232574836,56.4538399239065,57.8660793927371,56.5081611352399,60.8329434138472,54.7069918746622,40.699101613623,22.9895545842163,0,43.5093148987978,33.7535320532479,36.9457257853691,50.3723311563151,48.3214518903626,44.4783934467408,16.2755481054938,13.1074180532139,5.31485065817213,18.4339204005034,18.9606672376907,33.2469353075869,37.3867884079971,31.5707599836042,30.6135649591393,38.7428641823467,19.8322491707949,19.0519490055205,23.3232499380221,16.15584301086,16.6363205475787,12.0847772117293,9.90981968895393,11.6876902181569,96.3604130364648,0.443971906748129,3.94740969081693,1.67884616364078,70.1278226336851,158.7793742317,68.3155558516899,37.7288347179156,19.5613120573792,12.4245405375755,15.1907328047368,19.4784474569395,13.4045482228076,8.22099023724771,7.5539389738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| |||
|short_description=p1@Pecam1 | |||
}} | |||
Revision as of 18:33, 12 September 2013
| Short description: | p1@Pecam1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Pecam1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:94 |
| Association with transcript: | 0bp_to_ENSMUST00000080853, ENSMUST00000103069, ENSMUST00000165352, NM_001032378, NM_008816, uc007lzf.1, uc007lzg.1, uc007lzh.1_5end |
| EntrezGene: | Pecam1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk region element | 1.08e-11 | 79 |
| lung | 1.92e-09 | 14 |
| respiratory tube | 1.92e-09 | 14 |
| respiration organ | 1.92e-09 | 14 |
| pair of lungs | 1.92e-09 | 14 |
| lung primordium | 1.92e-09 | 14 |
| lung bud | 1.92e-09 | 14 |
| epithelial bud | 3.57e-09 | 17 |
| subdivision of trunk | 1.39e-08 | 66 |
| trunk | 1.46e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
