FFCP PHASE1:Mm9::chr11:118164951..118164973,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=487|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:118164951..118164973,-|id=chr11:118164951..118164973,-|ontology_enrichment_celltype=CL:0000055!1.33e-09!50;CL:0002319!5.21e-07!43;CL:0002453!8.04e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,4.72e-16,8;CL:0000680,3.99e-15,6;CL:0000187,3.99e-15,6;CL:0000056,3.99e-15,6;CL:0000222,7.33e-13,7;CL:0000333,1.30e-12,10;CL:0000095,1.30e-12,10;CL:0000243,1.30e-12,10;CL:0000123,1.30e-12,10;CL:0000125,1.30e-12,10;CL:0000030,1.30e-12,10;CL:0000339,1.30e-12,10;CL:0002321,2.36e-11,70;CL:0000128,3.03e-11,6;CL:0000126,3.03e-11,6;CL:0000127,3.03e-11,6;CL:0002194,1.56e-10,4;CL:0000766,1.56e-10,4;CL:0000234,1.56e-10,4;CL:0000576,1.56e-10,4;CL:0000235,1.56e-10,4;CL:0000864,1.56e-10,4;CL:0002009,1.56e-10,4;CL:0000040,1.56e-10,4;CL:0000559,1.56e-10,4;CL:0000355,7.69e-10,9;CL:0000723,1.70e-09,91;CL:0000048,1.70e-09,91;CL:0000192,2.63e-09,3;CL:0000359,2.63e-09,3;CL:0002539,2.63e-09,3;CL:0000514,2.63e-09,3;CL:0000219,9.52e-09,54;CL:0000034,1.38e-08,97;CL:0002494,1.71e-07,3;CL:0000737,1.71e-07,3;CL:0000746,1.71e-07,3;CL:0000513,1.71e-07,3;CL:0002319,2.30e-07,43;CL:0000221,3.91e-07,44;CL:0000133,3.91e-07,44;CL:0000393,9.50e-07,39;CL:0000211,9.50e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.35e-09!73;UBERON:0005743!7.35e-09!73;UBERON:0000073!2.12e-08!75;UBERON:0001016!2.12e-08!75;UBERON:0004121!3.62e-07!102;UBERON:0000924!3.62e-07!102;UBERON:0006601!3.62e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.41e-11,32;UBERON:0001134,7.69e-10,9;UBERON:0002036,7.69e-10,9;UBERON:0002385,7.69e-10,9;UBERON:0000486,7.69e-10,9;UBERON:0007503,7.69e-10,9;UBERON:0001015,7.69e-10,9;UBERON:0002329,7.69e-10,9;UBERON:0003082,7.69e-10,9;UBERON:0003059,7.69e-10,9;UBERON:0007282,7.69e-10,9;UBERON:0004290,7.69e-10,9;UBERON:0009618,7.69e-10,9;UBERON:0001135,2.63e-09,3;UBERON:0004237,2.63e-09,3;UBERON:0004695,2.63e-09,3;UBERON:0002111,2.63e-09,3;UBERON:0004178,2.63e-09,3;UBERON:0000383,8.78e-09,10;UBERON:0007524,6.45e-08,11;UBERON:0003077,6.45e-08,11;UBERON:0007285,6.45e-08,11;UBERON:0000947,4.78e-07,4;UBERON:0001637,4.78e-07,4;UBERON:0004573,4.78e-07,4;UBERON:0003509,4.78e-07,4;UBERON:0004571,4.78e-07,4;UBERON:0010191,4.78e-07,4;UBERON:0004572,4.78e-07,4|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,8.93867407626599,9.63080846585388,5.13930906052708,2.34717403304412,0.65407546914134,2.63623419281366,7.19390626574849,3.91961980551015,4.31257693094915,0,0,0.336093799142464,1.54355661621568,1.43266719969378,1.54701627683233,0,0,0,1.0165335962074,3.55717918444456,3.1496490104849,4.94433181283487,0.7104801149461,3.89480143673926,5.37905627450176,0.103689612308478,0.135005938331691,0,0.285650984403804,0.662605622854841,0.122490799214954,0.191690942036473,0,2.20231761998777,0.766124028511126,0.614426133024974,0.395658863190582,0.365950574409639,0,1.95428099300967,2.25105044012672,0.763991238884051,0.589257170947335,0.569486723196412,0.559198337475902,0.151452386666368,0,0,0,0,0,0,0,0,2.04516387093669,3.11743205523443,1.7666978725517,0,0,2.54805239706646,0,0,0.253359865475099,1.01104889002957,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0.662524555381181,1.93950101254089,0,0,0.628340120440365,0,0,0,0,1.19832511523858,0.457500602818626,0.125654352112864,0.347648640384553,0.511430914660661,0.83115217823824,0.162241263067758,0.916554274652847,0.373220911830279,0.252722758433675,0.210441855886474,0.390361328888111,0,0,0.30140963567143,0.204109497453984,0.512454881139399,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.351902248327898,0,1.11218899690239,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0.154267112887378,0.930135779001631,0,0.233530684734339,0.493679549740441,0.164167464079095,0,0.438599962275997,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,1.1270773567308,0.610953983535943,0,0.140271639780637,0.189709611372772,0,0.31399745568275,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0,0,0,0.739012760666419,0,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0.44292937929755,0.637819074629948,0.163863314715738,0.863424909329478,0.578596234326046,1.50791283939272,1.63171705145613,0.491764273019036,0.275936746304732,0.642202359951168,0.234423373184406,0.327869890753351,0.757412781613119,0.315508219416257,0.390438744296638,0.646270193198397,0.955875191810208,1.55959071857676,0.283076530788832,0,1.46127928955656,1.18586333383957,0.321321316421807,0.567760340833074,0.35613120733451,0.651547837414304,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0.178368817602071,0,0.608929898229199,0,0.21183207086382,0,0.32977250588296,0,0.180938774784468,0.358117032009409,0.164140899745061,0,0.927126510052548,0.170870880797853,0.619160603889667,0.555583582109135,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.655087691238533,0.539457385539283,0.247960367176008,0,0,0.621339313086926,0.56369293868419,0.299033092087958,0.165458490457098,0,0.516639293910924,0.168956125490778,0.117357238645754,0,0,0.966336483304024,0,0,0.202725215290164,0.410843828659309,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.680191150845634,0,0.179427713218951,0,1.73870634628971,0.375364950902364,0.36630324853453,0.643105137237198,0.501572104035363,0.564751842617067,0,1.14579102687879,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.192075457214608,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0.70990322463735,0,0.581385666529314,0.0941093804153306,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0,0.214871054048298,0.57386499620653,0.441182838239031,0.695603506861264|short_description=p@chr11:118164951..118164973,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=487 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:118164951..118164973,- | |||
|id=chr11:118164951..118164973,- | |||
|ontology_enrichment_celltype=CL:0000055!1.33e-09!50;CL:0002319!5.21e-07!43;CL:0002453!8.04e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.72e-16,8;CL:0000680,3.99e-15,6;CL:0000187,3.99e-15,6;CL:0000056,3.99e-15,6;CL:0000222,7.33e-13,7;CL:0000333,1.30e-12,10;CL:0000095,1.30e-12,10;CL:0000243,1.30e-12,10;CL:0000123,1.30e-12,10;CL:0000125,1.30e-12,10;CL:0000030,1.30e-12,10;CL:0000339,1.30e-12,10;CL:0002321,2.36e-11,70;CL:0000128,3.03e-11,6;CL:0000126,3.03e-11,6;CL:0000127,3.03e-11,6;CL:0002194,1.56e-10,4;CL:0000766,1.56e-10,4;CL:0000234,1.56e-10,4;CL:0000576,1.56e-10,4;CL:0000235,1.56e-10,4;CL:0000864,1.56e-10,4;CL:0002009,1.56e-10,4;CL:0000040,1.56e-10,4;CL:0000559,1.56e-10,4;CL:0000355,7.69e-10,9;CL:0000723,1.70e-09,91;CL:0000048,1.70e-09,91;CL:0000192,2.63e-09,3;CL:0000359,2.63e-09,3;CL:0002539,2.63e-09,3;CL:0000514,2.63e-09,3;CL:0000219,9.52e-09,54;CL:0000034,1.38e-08,97;CL:0002494,1.71e-07,3;CL:0000737,1.71e-07,3;CL:0000746,1.71e-07,3;CL:0000513,1.71e-07,3;CL:0002319,2.30e-07,43;CL:0000221,3.91e-07,44;CL:0000133,3.91e-07,44;CL:0000393,9.50e-07,39;CL:0000211,9.50e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.35e-09!73;UBERON:0005743!7.35e-09!73;UBERON:0000073!2.12e-08!75;UBERON:0001016!2.12e-08!75;UBERON:0004121!3.62e-07!102;UBERON:0000924!3.62e-07!102;UBERON:0006601!3.62e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.41e-11,32;UBERON:0001134,7.69e-10,9;UBERON:0002036,7.69e-10,9;UBERON:0002385,7.69e-10,9;UBERON:0000486,7.69e-10,9;UBERON:0007503,7.69e-10,9;UBERON:0001015,7.69e-10,9;UBERON:0002329,7.69e-10,9;UBERON:0003082,7.69e-10,9;UBERON:0003059,7.69e-10,9;UBERON:0007282,7.69e-10,9;UBERON:0004290,7.69e-10,9;UBERON:0009618,7.69e-10,9;UBERON:0001135,2.63e-09,3;UBERON:0004237,2.63e-09,3;UBERON:0004695,2.63e-09,3;UBERON:0002111,2.63e-09,3;UBERON:0004178,2.63e-09,3;UBERON:0000383,8.78e-09,10;UBERON:0007524,6.45e-08,11;UBERON:0003077,6.45e-08,11;UBERON:0007285,6.45e-08,11;UBERON:0000947,4.78e-07,4;UBERON:0001637,4.78e-07,4;UBERON:0004573,4.78e-07,4;UBERON:0003509,4.78e-07,4;UBERON:0004571,4.78e-07,4;UBERON:0010191,4.78e-07,4;UBERON:0004572,4.78e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,8.93867407626599,9.63080846585388,5.13930906052708,2.34717403304412,0.65407546914134,2.63623419281366,7.19390626574849,3.91961980551015,4.31257693094915,0,0,0.336093799142464,1.54355661621568,1.43266719969378,1.54701627683233,0,0,0,1.0165335962074,3.55717918444456,3.1496490104849,4.94433181283487,0.7104801149461,3.89480143673926,5.37905627450176,0.103689612308478,0.135005938331691,0,0.285650984403804,0.662605622854841,0.122490799214954,0.191690942036473,0,2.20231761998777,0.766124028511126,0.614426133024974,0.395658863190582,0.365950574409639,0,1.95428099300967,2.25105044012672,0.763991238884051,0.589257170947335,0.569486723196412,0.559198337475902,0.151452386666368,0,0,0,0,0,0,0,0,2.04516387093669,3.11743205523443,1.7666978725517,0,0,2.54805239706646,0,0,0.253359865475099,1.01104889002957,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0.662524555381181,1.93950101254089,0,0,0.628340120440365,0,0,0,0,1.19832511523858,0.457500602818626,0.125654352112864,0.347648640384553,0.511430914660661,0.83115217823824,0.162241263067758,0.916554274652847,0.373220911830279,0.252722758433675,0.210441855886474,0.390361328888111,0,0,0.30140963567143,0.204109497453984,0.512454881139399,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.351902248327898,0,1.11218899690239,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0.154267112887378,0.930135779001631,0,0.233530684734339,0.493679549740441,0.164167464079095,0,0.438599962275997,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,1.1270773567308,0.610953983535943,0,0.140271639780637,0.189709611372772,0,0.31399745568275,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0,0,0,0.739012760666419,0,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0.44292937929755,0.637819074629948,0.163863314715738,0.863424909329478,0.578596234326046,1.50791283939272,1.63171705145613,0.491764273019036,0.275936746304732,0.642202359951168,0.234423373184406,0.327869890753351,0.757412781613119,0.315508219416257,0.390438744296638,0.646270193198397,0.955875191810208,1.55959071857676,0.283076530788832,0,1.46127928955656,1.18586333383957,0.321321316421807,0.567760340833074,0.35613120733451,0.651547837414304,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0.178368817602071,0,0.608929898229199,0,0.21183207086382,0,0.32977250588296,0,0.180938774784468,0.358117032009409,0.164140899745061,0,0.927126510052548,0.170870880797853,0.619160603889667,0.555583582109135,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.655087691238533,0.539457385539283,0.247960367176008,0,0,0.621339313086926,0.56369293868419,0.299033092087958,0.165458490457098,0,0.516639293910924,0.168956125490778,0.117357238645754,0,0,0.966336483304024,0,0,0.202725215290164,0.410843828659309,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.680191150845634,0,0.179427713218951,0,1.73870634628971,0.375364950902364,0.36630324853453,0.643105137237198,0.501572104035363,0.564751842617067,0,1.14579102687879,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.192075457214608,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0.70990322463735,0,0.581385666529314,0.0941093804153306,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0,0.214871054048298,0.57386499620653,0.441182838239031,0.695603506861264 | |||
|short_description=p@chr11:118164951..118164973,- | |||
}} |
Revision as of 18:59, 12 September 2013
Short description: | p@chr11:118164951..118164973, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:118164951..118164973, - |
Coexpression cluster: | MCL_coexpression_mm9:487 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.41e-11 | 32 |
skeletal muscle tissue | 7.69e-10 | 9 |
striated muscle tissue | 7.69e-10 | 9 |
muscle tissue | 7.69e-10 | 9 |
multilaminar epithelium | 7.69e-10 | 9 |
epithelial vesicle | 7.69e-10 | 9 |
musculature | 7.69e-10 | 9 |
somite | 7.69e-10 | 9 |
myotome | 7.69e-10 | 9 |
presomitic mesoderm | 7.69e-10 | 9 |
presumptive segmental plate | 7.69e-10 | 9 |
dermomyotome | 7.69e-10 | 9 |
trunk paraxial mesoderm | 7.69e-10 | 9 |
smooth muscle tissue | 2.63e-09 | 3 |
blood vessel smooth muscle | 2.63e-09 | 3 |
arterial system smooth muscle | 2.63e-09 | 3 |
artery smooth muscle tissue | 2.63e-09 | 3 |
aorta smooth muscle tissue | 2.63e-09 | 3 |
musculature of body | 8.78e-09 | 10 |
dense mesenchyme tissue | 6.45e-08 | 11 |
paraxial mesoderm | 6.45e-08 | 11 |
presumptive paraxial mesoderm | 6.45e-08 | 11 |
aorta | 4.78e-07 | 4 |
artery | 4.78e-07 | 4 |
systemic artery | 4.78e-07 | 4 |
arterial blood vessel | 4.78e-07 | 4 |
systemic arterial system | 4.78e-07 | 4 |
aortic system | 4.78e-07 | 4 |
arterial system | 4.78e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.