FFCP PHASE1:Mm9::chr11:118216810..118216811,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21858|HGNC=|MCL_coexpression_id=1509|UniProt=Q6PI17|association_with_transcript=8bp_to_ENSMUST00000017610_5end|description=CAGE_peak_3_at_Timp2_5end|id=chr11:118216810..118216811,-|ontology_enrichment_celltype=CL:0000117!1.30e-15!23;CL:0000337!1.30e-15!23;CL:0000540!1.77e-10!33;CL:0000047!1.77e-10!33;CL:0000031!1.77e-10!33;CL:0000404!1.77e-10!33;CL:0000221!2.69e-09!44;CL:0000133!2.69e-09!44;CL:0002319!7.61e-09!43;CL:0000393!1.19e-07!39;CL:0000211!1.19e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-16,23;CL:0000337,1.06e-16,23;CL:0002614,8.11e-12,3;CL:0000540,4.64e-11,33;CL:0000047,4.64e-11,33;CL:0000031,4.64e-11,33;CL:0000404,4.64e-11,33;CL:0000393,4.59e-09,39;CL:0000211,4.59e-09,39;CL:0002319,4.81e-08,43;CL:0002611,6.18e-08,2;CL:0000221,8.09e-08,44;CL:0000133,8.09e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.21e-25!52;UBERON:0005068!7.21e-25!52;UBERON:0006241!7.21e-25!52;UBERON:0007135!7.21e-25!52;UBERON:0001017!3.29e-23!73;UBERON:0005743!3.29e-23!73;UBERON:0000073!6.81e-23!75;UBERON:0001016!6.81e-23!75;UBERON:0002020!7.55e-23!34;UBERON:0000955!2.71e-21!50;UBERON:0006238!2.71e-21!50;UBERON:0002616!1.97e-20!49;UBERON:0002346!3.53e-20!71;UBERON:0003075!3.53e-20!71;UBERON:0007284!3.53e-20!71;UBERON:0000033!2.51e-19!63;UBERON:0002791!3.20e-18!29;UBERON:0003528!3.20e-18!29;UBERON:0001893!3.20e-18!29;UBERON:0003080!4.92e-18!40;UBERON:0003056!3.83e-17!49;UBERON:0002780!4.46e-17!39;UBERON:0001890!4.46e-17!39;UBERON:0006240!4.46e-17!39;UBERON:0004121!1.07e-16!102;UBERON:0000924!1.07e-16!102;UBERON:0006601!1.07e-16!102;UBERON:0007811!1.97e-15!86;UBERON:0000153!2.98e-14!94;UBERON:0000956!2.74e-11!21;UBERON:0001869!2.74e-11!21;UBERON:0000203!2.74e-11!21;UBERON:0002619!2.79e-10!17;UBERON:0002420!1.69e-08!8;UBERON:0007245!1.69e-08!8;UBERON:0010009!1.69e-08!8;UBERON:0010011!1.69e-08!8;UBERON:0000454!1.69e-08!8;UBERON:0002021!1.75e-07!10;UBERON:0000411!1.75e-07!10;UBERON:0001950!1.75e-07!10;UBERON:0003076!1.99e-07!12;UBERON:0003057!1.99e-07!12;UBERON:0002298!2.39e-07!6;UBERON:0002240!6.58e-07!6;UBERON:0005174!6.58e-07!6;UBERON:0001137!6.58e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.54e-29,54;UBERON:0001049,2.07e-27,52;UBERON:0005068,2.07e-27,52;UBERON:0006241,2.07e-27,52;UBERON:0007135,2.07e-27,52;UBERON:0001017,3.64e-27,73;UBERON:0001016,2.45e-26,75;UBERON:0002346,1.42e-21,64;UBERON:0003075,1.42e-21,64;UBERON:0007284,1.42e-21,64;UBERON:0002020,4.11e-21,34;UBERON:0004121,5.77e-20,95;UBERON:0000924,5.77e-20,95;UBERON:0006601,5.77e-20,95;UBERON:0000955,2.47e-19,47;UBERON:0006238,2.47e-19,47;UBERON:0010371,1.89e-18,73;UBERON:0002616,1.85e-17,46;UBERON:0002420,2.17e-16,8;UBERON:0007245,2.17e-16,8;UBERON:0010009,2.17e-16,8;UBERON:0010011,2.17e-16,8;UBERON:0000454,2.17e-16,8;UBERON:0002950,1.91e-15,4;UBERON:0001891,1.91e-15,4;UBERON:0009616,1.91e-15,4;UBERON:0010286,1.91e-15,4;UBERON:0003080,2.46e-15,40;UBERON:0002240,6.56e-15,6;UBERON:0005174,6.56e-15,6;UBERON:0001137,6.56e-15,6;UBERON:0003076,4.11e-14,12;UBERON:0003057,4.11e-14,12;UBERON:0010314,7.50e-14,92;UBERON:0002780,2.26e-13,39;UBERON:0001890,2.26e-13,39;UBERON:0006240,2.26e-13,39;UBERON:0003528,3.21e-13,29;UBERON:0002791,3.21e-13,29;UBERON:0001893,3.21e-13,29;UBERON:0003056,4.99e-12,49;UBERON:0002038,8.11e-12,3;UBERON:0009663,8.11e-12,3;UBERON:0009661,8.11e-12,3;UBERON:0000125,8.11e-12,3;UBERON:0002308,8.11e-12,3;UBERON:0001948,1.14e-11,5;UBERON:0002315,1.14e-11,5;UBERON:0000025,1.98e-10,114;UBERON:0004111,1.73e-09,122;UBERON:0001896,1.79e-08,2;UBERON:0002298,1.79e-08,2;UBERON:0005290,1.79e-08,2;UBERON:0010096,1.79e-08,2;UBERON:0002256,6.18e-08,2;UBERON:0011216,1.17e-07,194;UBERON:0000369,2.78e-07,5;UBERON:0002435,2.78e-07,5;UBERON:0000204,2.78e-07,5;UBERON:0010082,2.78e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0.725362142011344,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,1.14260393761521,2.65042249141936,0.367472397644862,0.575072826109418,0.919218786610021,0,1.27687338085188,2.15049146558741,0.395658863190582,0.640413505216868,1.04182674111352,2.79182999001381,1.68828783009504,3.36156145108982,2.35702868378934,2.42031857358475,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,4.34392854273986,5.49000723382352,5.90575454930463,1.73824320192276,0.767146371990992,1.87009240103604,3.0825839982874,0.101839363850316,0,0,0,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0.92614151141356,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,2.40825884981688,2.81308047821288,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,2.59595422814714,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.54667864109319,2.74033007908257,0.755393897389701,0.675022500231806,0.900642406448441,0,2.07104124700728,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0.962757628775446,0,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.263069711437843,0,0,0.237270036248348,0.394017929502254,0,0,0,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0,0|short_description=p3@Timp2}} | ||
|EntrezGene=21858 | |||
|HGNC= | |||
|MCL_coexpression_id=1509 | |||
|UniProt=Q6PI17 | |||
|association_with_transcript=8bp_to_ENSMUST00000017610_5end | |||
|description=CAGE_peak_3_at_Timp2_5end | |||
|id=chr11:118216810..118216811,- | |||
|ontology_enrichment_celltype=CL:0000117!1.30e-15!23;CL:0000337!1.30e-15!23;CL:0000540!1.77e-10!33;CL:0000047!1.77e-10!33;CL:0000031!1.77e-10!33;CL:0000404!1.77e-10!33;CL:0000221!2.69e-09!44;CL:0000133!2.69e-09!44;CL:0002319!7.61e-09!43;CL:0000393!1.19e-07!39;CL:0000211!1.19e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-16,23;CL:0000337,1.06e-16,23;CL:0002614,8.11e-12,3;CL:0000540,4.64e-11,33;CL:0000047,4.64e-11,33;CL:0000031,4.64e-11,33;CL:0000404,4.64e-11,33;CL:0000393,4.59e-09,39;CL:0000211,4.59e-09,39;CL:0002319,4.81e-08,43;CL:0002611,6.18e-08,2;CL:0000221,8.09e-08,44;CL:0000133,8.09e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.21e-25!52;UBERON:0005068!7.21e-25!52;UBERON:0006241!7.21e-25!52;UBERON:0007135!7.21e-25!52;UBERON:0001017!3.29e-23!73;UBERON:0005743!3.29e-23!73;UBERON:0000073!6.81e-23!75;UBERON:0001016!6.81e-23!75;UBERON:0002020!7.55e-23!34;UBERON:0000955!2.71e-21!50;UBERON:0006238!2.71e-21!50;UBERON:0002616!1.97e-20!49;UBERON:0002346!3.53e-20!71;UBERON:0003075!3.53e-20!71;UBERON:0007284!3.53e-20!71;UBERON:0000033!2.51e-19!63;UBERON:0002791!3.20e-18!29;UBERON:0003528!3.20e-18!29;UBERON:0001893!3.20e-18!29;UBERON:0003080!4.92e-18!40;UBERON:0003056!3.83e-17!49;UBERON:0002780!4.46e-17!39;UBERON:0001890!4.46e-17!39;UBERON:0006240!4.46e-17!39;UBERON:0004121!1.07e-16!102;UBERON:0000924!1.07e-16!102;UBERON:0006601!1.07e-16!102;UBERON:0007811!1.97e-15!86;UBERON:0000153!2.98e-14!94;UBERON:0000956!2.74e-11!21;UBERON:0001869!2.74e-11!21;UBERON:0000203!2.74e-11!21;UBERON:0002619!2.79e-10!17;UBERON:0002420!1.69e-08!8;UBERON:0007245!1.69e-08!8;UBERON:0010009!1.69e-08!8;UBERON:0010011!1.69e-08!8;UBERON:0000454!1.69e-08!8;UBERON:0002021!1.75e-07!10;UBERON:0000411!1.75e-07!10;UBERON:0001950!1.75e-07!10;UBERON:0003076!1.99e-07!12;UBERON:0003057!1.99e-07!12;UBERON:0002298!2.39e-07!6;UBERON:0002240!6.58e-07!6;UBERON:0005174!6.58e-07!6;UBERON:0001137!6.58e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.54e-29,54;UBERON:0001049,2.07e-27,52;UBERON:0005068,2.07e-27,52;UBERON:0006241,2.07e-27,52;UBERON:0007135,2.07e-27,52;UBERON:0001017,3.64e-27,73;UBERON:0001016,2.45e-26,75;UBERON:0002346,1.42e-21,64;UBERON:0003075,1.42e-21,64;UBERON:0007284,1.42e-21,64;UBERON:0002020,4.11e-21,34;UBERON:0004121,5.77e-20,95;UBERON:0000924,5.77e-20,95;UBERON:0006601,5.77e-20,95;UBERON:0000955,2.47e-19,47;UBERON:0006238,2.47e-19,47;UBERON:0010371,1.89e-18,73;UBERON:0002616,1.85e-17,46;UBERON:0002420,2.17e-16,8;UBERON:0007245,2.17e-16,8;UBERON:0010009,2.17e-16,8;UBERON:0010011,2.17e-16,8;UBERON:0000454,2.17e-16,8;UBERON:0002950,1.91e-15,4;UBERON:0001891,1.91e-15,4;UBERON:0009616,1.91e-15,4;UBERON:0010286,1.91e-15,4;UBERON:0003080,2.46e-15,40;UBERON:0002240,6.56e-15,6;UBERON:0005174,6.56e-15,6;UBERON:0001137,6.56e-15,6;UBERON:0003076,4.11e-14,12;UBERON:0003057,4.11e-14,12;UBERON:0010314,7.50e-14,92;UBERON:0002780,2.26e-13,39;UBERON:0001890,2.26e-13,39;UBERON:0006240,2.26e-13,39;UBERON:0003528,3.21e-13,29;UBERON:0002791,3.21e-13,29;UBERON:0001893,3.21e-13,29;UBERON:0003056,4.99e-12,49;UBERON:0002038,8.11e-12,3;UBERON:0009663,8.11e-12,3;UBERON:0009661,8.11e-12,3;UBERON:0000125,8.11e-12,3;UBERON:0002308,8.11e-12,3;UBERON:0001948,1.14e-11,5;UBERON:0002315,1.14e-11,5;UBERON:0000025,1.98e-10,114;UBERON:0004111,1.73e-09,122;UBERON:0001896,1.79e-08,2;UBERON:0002298,1.79e-08,2;UBERON:0005290,1.79e-08,2;UBERON:0010096,1.79e-08,2;UBERON:0002256,6.18e-08,2;UBERON:0011216,1.17e-07,194;UBERON:0000369,2.78e-07,5;UBERON:0002435,2.78e-07,5;UBERON:0000204,2.78e-07,5;UBERON:0010082,2.78e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0.725362142011344,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,1.14260393761521,2.65042249141936,0.367472397644862,0.575072826109418,0.919218786610021,0,1.27687338085188,2.15049146558741,0.395658863190582,0.640413505216868,1.04182674111352,2.79182999001381,1.68828783009504,3.36156145108982,2.35702868378934,2.42031857358475,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,4.34392854273986,5.49000723382352,5.90575454930463,1.73824320192276,0.767146371990992,1.87009240103604,3.0825839982874,0.101839363850316,0,0,0,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0.92614151141356,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,2.40825884981688,2.81308047821288,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,2.59595422814714,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.54667864109319,2.74033007908257,0.755393897389701,0.675022500231806,0.900642406448441,0,2.07104124700728,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0.962757628775446,0,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.263069711437843,0,0,0.237270036248348,0.394017929502254,0,0,0,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p3@Timp2 | |||
}} |
Revision as of 18:59, 12 September 2013
Short description: | p3@Timp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Timp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1509 |
Association with transcript: | 8bp_to_ENSMUST00000017610_5end |
EntrezGene: | Timp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.06e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-16 | 23 |
neuron of the substantia nigra | 8.11e-12 | 3 |
neuron | 4.64e-11 | 33 |
neuronal stem cell | 4.64e-11 | 33 |
neuroblast | 4.64e-11 | 33 |
electrically signaling cell | 4.64e-11 | 33 |
electrically responsive cell | 4.59e-09 | 39 |
electrically active cell | 4.59e-09 | 39 |
neural cell | 4.81e-08 | 43 |
neuron of the dorsal spinal cord | 6.18e-08 | 2 |
ectodermal cell | 8.09e-08 | 44 |
neurectodermal cell | 8.09e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.