FFCP PHASE1:Mm9::chr11:34685044..34685047,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:34685044..34685047,-|id=chr11:34685044..34685047,-|ontology_enrichment_celltype=CL:0000192!7.67e-11!3;CL:0000359!7.67e-11!3;CL:0002539!7.67e-11!3;CL:0000514!7.67e-11!3|ontology_enrichment_celltype_v019_2=CL:0000192,3.73e-38,3;CL:0000359,3.73e-38,3;CL:0002539,3.73e-38,3;CL:0000514,3.73e-38,3;CL:0000680,1.58e-19,6;CL:0000187,1.58e-19,6;CL:0000056,1.58e-19,6;CL:0000222,7.45e-17,7;CL:0000355,2.79e-13,9;CL:0000239,3.47e-09,6;CL:0000677,3.47e-09,6;CL:0000584,3.47e-09,6;CL:0000075,5.24e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000947!1.54e-13!4;UBERON:0001637!1.54e-13!4;UBERON:0003509!1.54e-13!4;UBERON:0004573!1.54e-13!4;UBERON:0004571!1.54e-13!4;UBERON:0010191!1.54e-13!4;UBERON:0004572!1.54e-13!4;UBERON:0003134!7.68e-13!8;UBERON:0003100!1.57e-12!11;UBERON:0005795!1.68e-12!4;UBERON:0000995!1.68e-12!4;UBERON:0004175!8.64e-12!9;UBERON:0000474!2.38e-11!9;UBERON:0001135!7.67e-11!3;UBERON:0004237!7.67e-11!3;UBERON:0004695!7.67e-11!3;UBERON:0002111!7.67e-11!3;UBERON:0004178!7.67e-11!3;UBERON:0000055!7.78e-11!5;UBERON:0001981!7.78e-11!5;UBERON:0002049!7.78e-11!5;UBERON:0007500!7.78e-11!5;UBERON:0007798!7.78e-11!5;UBERON:0004537!7.78e-11!5;UBERON:0006965!7.78e-11!5;UBERON:0003975!5.12e-10!5;UBERON:0007023!7.72e-09!51;UBERON:0005156!7.69e-08!26;UBERON:0000990!7.69e-08!26;UBERON:0001987!2.37e-07!2;UBERON:0003124!2.37e-07!2;UBERON:0004340!2.37e-07!2;UBERON:0010147!4.47e-07!2;UBERON:0003937!4.47e-07!2;UBERON:0005399!4.47e-07!2;UBERON:0003133!8.47e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.73e-38,3;UBERON:0004237,3.73e-38,3;UBERON:0004695,3.73e-38,3;UBERON:0002111,3.73e-38,3;UBERON:0004178,3.73e-38,3;UBERON:0000947,7.46e-29,4;UBERON:0001637,7.46e-29,4;UBERON:0004573,7.46e-29,4;UBERON:0003509,7.46e-29,4;UBERON:0004571,7.46e-29,4;UBERON:0010191,7.46e-29,4;UBERON:0004572,7.46e-29,4;UBERON:0000055,2.91e-23,5;UBERON:0007500,2.91e-23,5;UBERON:0001981,2.91e-23,5;UBERON:0002049,2.91e-23,5;UBERON:0007798,2.91e-23,5;UBERON:0004537,2.91e-23,5;UBERON:0006965,2.91e-23,5;UBERON:0001134,2.79e-13,9;UBERON:0002036,2.79e-13,9;UBERON:0002385,2.79e-13,9;UBERON:0000486,2.79e-13,9;UBERON:0007503,2.79e-13,9;UBERON:0001015,2.79e-13,9;UBERON:0002329,2.79e-13,9;UBERON:0003082,2.79e-13,9;UBERON:0003059,2.79e-13,9;UBERON:0007282,2.79e-13,9;UBERON:0004290,2.79e-13,9;UBERON:0009618,2.79e-13,9;UBERON:0000383,5.02e-12,10;UBERON:0007524,5.36e-11,11;UBERON:0003077,5.36e-11,11;UBERON:0007285,5.36e-11,11;UBERON:0001987,1.14e-07,2;UBERON:0003124,1.14e-07,2;UBERON:0004340,1.14e-07,2|phase1_expression=0,1.04692622291808,1.36499771816861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.72340783073175,1.46837401729345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,1.32745138339963,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.21183207086382,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:34685044..34685047,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:34685044..34685047,- | |||
|id=chr11:34685044..34685047,- | |||
|ontology_enrichment_celltype=CL:0000192!7.67e-11!3;CL:0000359!7.67e-11!3;CL:0002539!7.67e-11!3;CL:0000514!7.67e-11!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.73e-38,3;CL:0000359,3.73e-38,3;CL:0002539,3.73e-38,3;CL:0000514,3.73e-38,3;CL:0000680,1.58e-19,6;CL:0000187,1.58e-19,6;CL:0000056,1.58e-19,6;CL:0000222,7.45e-17,7;CL:0000355,2.79e-13,9;CL:0000239,3.47e-09,6;CL:0000677,3.47e-09,6;CL:0000584,3.47e-09,6;CL:0000075,5.24e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!1.54e-13!4;UBERON:0001637!1.54e-13!4;UBERON:0003509!1.54e-13!4;UBERON:0004573!1.54e-13!4;UBERON:0004571!1.54e-13!4;UBERON:0010191!1.54e-13!4;UBERON:0004572!1.54e-13!4;UBERON:0003134!7.68e-13!8;UBERON:0003100!1.57e-12!11;UBERON:0005795!1.68e-12!4;UBERON:0000995!1.68e-12!4;UBERON:0004175!8.64e-12!9;UBERON:0000474!2.38e-11!9;UBERON:0001135!7.67e-11!3;UBERON:0004237!7.67e-11!3;UBERON:0004695!7.67e-11!3;UBERON:0002111!7.67e-11!3;UBERON:0004178!7.67e-11!3;UBERON:0000055!7.78e-11!5;UBERON:0001981!7.78e-11!5;UBERON:0002049!7.78e-11!5;UBERON:0007500!7.78e-11!5;UBERON:0007798!7.78e-11!5;UBERON:0004537!7.78e-11!5;UBERON:0006965!7.78e-11!5;UBERON:0003975!5.12e-10!5;UBERON:0007023!7.72e-09!51;UBERON:0005156!7.69e-08!26;UBERON:0000990!7.69e-08!26;UBERON:0001987!2.37e-07!2;UBERON:0003124!2.37e-07!2;UBERON:0004340!2.37e-07!2;UBERON:0010147!4.47e-07!2;UBERON:0003937!4.47e-07!2;UBERON:0005399!4.47e-07!2;UBERON:0003133!8.47e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.73e-38,3;UBERON:0004237,3.73e-38,3;UBERON:0004695,3.73e-38,3;UBERON:0002111,3.73e-38,3;UBERON:0004178,3.73e-38,3;UBERON:0000947,7.46e-29,4;UBERON:0001637,7.46e-29,4;UBERON:0004573,7.46e-29,4;UBERON:0003509,7.46e-29,4;UBERON:0004571,7.46e-29,4;UBERON:0010191,7.46e-29,4;UBERON:0004572,7.46e-29,4;UBERON:0000055,2.91e-23,5;UBERON:0007500,2.91e-23,5;UBERON:0001981,2.91e-23,5;UBERON:0002049,2.91e-23,5;UBERON:0007798,2.91e-23,5;UBERON:0004537,2.91e-23,5;UBERON:0006965,2.91e-23,5;UBERON:0001134,2.79e-13,9;UBERON:0002036,2.79e-13,9;UBERON:0002385,2.79e-13,9;UBERON:0000486,2.79e-13,9;UBERON:0007503,2.79e-13,9;UBERON:0001015,2.79e-13,9;UBERON:0002329,2.79e-13,9;UBERON:0003082,2.79e-13,9;UBERON:0003059,2.79e-13,9;UBERON:0007282,2.79e-13,9;UBERON:0004290,2.79e-13,9;UBERON:0009618,2.79e-13,9;UBERON:0000383,5.02e-12,10;UBERON:0007524,5.36e-11,11;UBERON:0003077,5.36e-11,11;UBERON:0007285,5.36e-11,11;UBERON:0001987,1.14e-07,2;UBERON:0003124,1.14e-07,2;UBERON:0004340,1.14e-07,2 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.72340783073175,1.46837401729345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,1.32745138339963,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.21183207086382,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:34685044..34685047,- | |||
}} |
Revision as of 19:33, 12 September 2013
Short description: | p@chr11:34685044..34685047, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:34685044..34685047, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.73e-38 | 3 |
vascular associated smooth muscle cell | 3.73e-38 | 3 |
aortic smooth muscle cell | 3.73e-38 | 3 |
smooth muscle myoblast | 3.73e-38 | 3 |
muscle precursor cell | 1.58e-19 | 6 |
muscle cell | 1.58e-19 | 6 |
myoblast | 1.58e-19 | 6 |
mesodermal cell | 7.45e-17 | 7 |
multi-potent skeletal muscle stem cell | 2.79e-13 | 9 |
brush border epithelial cell | 3.47e-09 | 6 |
gut absorptive cell | 3.47e-09 | 6 |
enterocyte | 3.47e-09 | 6 |
columnar/cuboidal epithelial cell | 5.24e-08 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.