FFCP PHASE1:Mm9::chr11:36491183..36491192,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23964|HGNC=|MCL_coexpression_id=141|UniProt=|association_with_transcript=54bp_to_ENSMUST00000149787,uc007ilm.1_5end|description=CAGE_peak_23_at_Odz2_5end|id=chr11:36491183..36491192,-|ontology_enrichment_celltype=CL:0000117!4.96e-16!23;CL:0000337!4.96e-16!23;CL:0000540!1.18e-09!33;CL:0000047!1.18e-09!33;CL:0000031!1.18e-09!33;CL:0000404!1.18e-09!33;CL:0000393!1.88e-07!39;CL:0000211!1.88e-07!39|ontology_enrichment_celltype_v019_2=CL:0002613,3.67e-34,3;CL:0000117,2.95e-23,23;CL:0000337,2.95e-23,23;CL:0000540,3.05e-16,33;CL:0000047,3.05e-16,33;CL:0000031,3.05e-16,33;CL:0000404,3.05e-16,33;CL:0000120,2.85e-15,3;CL:0002610,2.85e-15,3;CL:0000393,9.47e-14,39;CL:0000211,9.47e-14,39;CL:0002319,1.80e-12,43;CL:0000221,3.45e-12,44;CL:0000133,3.45e-12,44;CL:0002321,1.24e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.00e-18!63;UBERON:0003056!3.21e-16!49;UBERON:0002616!1.02e-15!49;UBERON:0000955!3.03e-15!50;UBERON:0006238!3.03e-15!50;UBERON:0002346!4.97e-15!71;UBERON:0003075!4.97e-15!71;UBERON:0007284!4.97e-15!71;UBERON:0001017!2.90e-14!73;UBERON:0005743!2.90e-14!73;UBERON:0001049!7.69e-14!52;UBERON:0005068!7.69e-14!52;UBERON:0006241!7.69e-14!52;UBERON:0007135!7.69e-14!52;UBERON:0000073!1.25e-13!75;UBERON:0001016!1.25e-13!75;UBERON:0004121!2.39e-13!102;UBERON:0000924!2.39e-13!102;UBERON:0006601!2.39e-13!102;UBERON:0002020!7.98e-13!34;UBERON:0002791!1.32e-12!29;UBERON:0003528!1.32e-12!29;UBERON:0001893!1.32e-12!29;UBERON:0007811!3.96e-11!86;UBERON:0003080!3.98e-11!40;UBERON:0002780!1.98e-10!39;UBERON:0001890!1.98e-10!39;UBERON:0006240!1.98e-10!39;UBERON:0000153!3.61e-10!94;UBERON:0000956!1.30e-07!21;UBERON:0001869!1.30e-07!21;UBERON:0000203!1.30e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.72e-21,5;UBERON:0002435,7.72e-21,5;UBERON:0000204,7.72e-21,5;UBERON:0010082,7.72e-21,5;UBERON:0004684,2.85e-15,3;UBERON:0002275,2.85e-15,3;UBERON:0002420,2.64e-13,8;UBERON:0007245,2.64e-13,8;UBERON:0010009,2.64e-13,8;UBERON:0010011,2.64e-13,8;UBERON:0000454,2.64e-13,8;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0000073,2.06e-07,54;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,1.14918604276669,0.46081959976873,2.63772575460388,3.11057988248193,2.08365348222704,0.279182999001381,0,0.15279824777681,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0,0.251308704225729,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0.260240885925407,0.689706313300419,0,0.150704817835715,0.408218994907967,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,1.35096360967266,0,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.441596760403192,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p23@Odz2}} | ||
|EntrezGene=23964 | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|UniProt= | |||
|association_with_transcript=54bp_to_ENSMUST00000149787,uc007ilm.1_5end | |||
|description=CAGE_peak_23_at_Odz2_5end | |||
|id=chr11:36491183..36491192,- | |||
|ontology_enrichment_celltype=CL:0000117!4.96e-16!23;CL:0000337!4.96e-16!23;CL:0000540!1.18e-09!33;CL:0000047!1.18e-09!33;CL:0000031!1.18e-09!33;CL:0000404!1.18e-09!33;CL:0000393!1.88e-07!39;CL:0000211!1.88e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.67e-34,3;CL:0000117,2.95e-23,23;CL:0000337,2.95e-23,23;CL:0000540,3.05e-16,33;CL:0000047,3.05e-16,33;CL:0000031,3.05e-16,33;CL:0000404,3.05e-16,33;CL:0000120,2.85e-15,3;CL:0002610,2.85e-15,3;CL:0000393,9.47e-14,39;CL:0000211,9.47e-14,39;CL:0002319,1.80e-12,43;CL:0000221,3.45e-12,44;CL:0000133,3.45e-12,44;CL:0002321,1.24e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.00e-18!63;UBERON:0003056!3.21e-16!49;UBERON:0002616!1.02e-15!49;UBERON:0000955!3.03e-15!50;UBERON:0006238!3.03e-15!50;UBERON:0002346!4.97e-15!71;UBERON:0003075!4.97e-15!71;UBERON:0007284!4.97e-15!71;UBERON:0001017!2.90e-14!73;UBERON:0005743!2.90e-14!73;UBERON:0001049!7.69e-14!52;UBERON:0005068!7.69e-14!52;UBERON:0006241!7.69e-14!52;UBERON:0007135!7.69e-14!52;UBERON:0000073!1.25e-13!75;UBERON:0001016!1.25e-13!75;UBERON:0004121!2.39e-13!102;UBERON:0000924!2.39e-13!102;UBERON:0006601!2.39e-13!102;UBERON:0002020!7.98e-13!34;UBERON:0002791!1.32e-12!29;UBERON:0003528!1.32e-12!29;UBERON:0001893!1.32e-12!29;UBERON:0007811!3.96e-11!86;UBERON:0003080!3.98e-11!40;UBERON:0002780!1.98e-10!39;UBERON:0001890!1.98e-10!39;UBERON:0006240!1.98e-10!39;UBERON:0000153!3.61e-10!94;UBERON:0000956!1.30e-07!21;UBERON:0001869!1.30e-07!21;UBERON:0000203!1.30e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.72e-21,5;UBERON:0002435,7.72e-21,5;UBERON:0000204,7.72e-21,5;UBERON:0010082,7.72e-21,5;UBERON:0004684,2.85e-15,3;UBERON:0002275,2.85e-15,3;UBERON:0002420,2.64e-13,8;UBERON:0007245,2.64e-13,8;UBERON:0010009,2.64e-13,8;UBERON:0010011,2.64e-13,8;UBERON:0000454,2.64e-13,8;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0000073,2.06e-07,54;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,1.14918604276669,0.46081959976873,2.63772575460388,3.11057988248193,2.08365348222704,0.279182999001381,0,0.15279824777681,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0,0.251308704225729,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0.260240885925407,0.689706313300419,0,0.150704817835715,0.408218994907967,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,1.35096360967266,0,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.441596760403192,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p23@Odz2 | |||
}} |
Revision as of 19:35, 12 September 2013
Short description: | p23@Odz2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_Odz2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | 54bp_to_ENSMUST00000149787, uc007ilm.1_5end |
EntrezGene: | Odz2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.67e-34 | 3 |
CNS neuron (sensu Vertebrata) | 2.95e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.95e-23 | 23 |
neuron | 3.05e-16 | 33 |
neuronal stem cell | 3.05e-16 | 33 |
neuroblast | 3.05e-16 | 33 |
electrically signaling cell | 3.05e-16 | 33 |
granule cell | 2.85e-15 | 3 |
raphe nuclei neuron | 2.85e-15 | 3 |
electrically responsive cell | 9.47e-14 | 39 |
electrically active cell | 9.47e-14 | 39 |
neural cell | 1.80e-12 | 43 |
ectodermal cell | 3.45e-12 | 44 |
neurectodermal cell | 3.45e-12 | 44 |
embryonic cell | 1.24e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.72e-21 | 5 |
striatum | 7.72e-21 | 5 |
ventral part of telencephalon | 7.72e-21 | 5 |
future corpus striatum | 7.72e-21 | 5 |
raphe nuclei | 2.85e-15 | 3 |
reticular formation | 2.85e-15 | 3 |
basal ganglion | 2.64e-13 | 8 |
nuclear complex of neuraxis | 2.64e-13 | 8 |
aggregate regional part of brain | 2.64e-13 | 8 |
collection of basal ganglia | 2.64e-13 | 8 |
cerebral subcortex | 2.64e-13 | 8 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
regional part of nervous system | 2.06e-07 | 54 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.