FFCP PHASE1:Mm9::chr11:46203011..46203027,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=16428|HGNC=|MCL_coexpression_id=7|UniProt=Q5STT8,Q03526,Q5STT7,A1A560,A6PWE2,Q3U5G1|association_with_transcript=0bp_to_ENSMUST00000020664,NM_010583,uc007iog.1,uc007ioh.1,uc007ioi.1,uc011xtm.1,uc011xtn.1,uc011xto.1_5end|description=CAGE_peak_3_at_Itk_5end|id=chr11:46203011..46203027,-|ontology_enrichment_celltype=CL:0000838!6.56e-12!12;CL:0000084!8.30e-12!11;CL:0000827!8.30e-12!11;CL:0000791!8.01e-11!9;CL:0000789!8.01e-11!9;CL:0002420!8.01e-11!9;CL:0002419!8.01e-11!9;CL:0000790!8.01e-11!9;CL:0000542!1.20e-10!13;CL:0000051!1.20e-10!13;CL:0000624!8.86e-10!8;CL:0002031!1.08e-08!25;CL:0000893!9.00e-08!6;CL:0002489!9.00e-08!6;CL:0000898!9.00e-08!6;CL:0000809!9.00e-08!6;CL:0000810!9.00e-08!6;CL:0000895!9.00e-08!6;CL:0000808!9.00e-08!6;CL:0000894!9.00e-08!6;CL:0000806!9.00e-08!6;CL:0000807!9.00e-08!6;CL:0000805!9.00e-08!6;CL:0002425!9.00e-08!6;CL:0002436!9.00e-08!6;CL:0002427!9.00e-08!6;CL:0002428!9.00e-08!6;CL:0002429!9.00e-08!6;CL:0002433!9.00e-08!6;CL:0002431!9.00e-08!6;CL:0002432!9.00e-08!6;CL:0000738!3.78e-07!17;CL:0002087!3.78e-07!17|ontology_enrichment_celltype_v019_2=CL:0000791,3.01e-20,9;CL:0000789,3.01e-20,9;CL:0002420,3.01e-20,9;CL:0002419,3.01e-20,9;CL:0000790,3.01e-20,9;CL:0000084,1.46e-19,11;CL:0000827,1.46e-19,11;CL:0000624,3.86e-18,8;CL:0000838,9.95e-18,12;CL:0000542,3.54e-16,13;CL:0000051,3.54e-16,13;CL:0002031,2.73e-14,25;CL:0000893,4.27e-14,6;CL:0002489,4.27e-14,6;CL:0000898,4.27e-14,6;CL:0000809,4.27e-14,6;CL:0000810,4.27e-14,6;CL:0000895,4.27e-14,6;CL:0000808,4.27e-14,6;CL:0000894,4.27e-14,6;CL:0000806,4.27e-14,6;CL:0000807,4.27e-14,6;CL:0000805,4.27e-14,6;CL:0002425,4.27e-14,6;CL:0002436,4.27e-14,6;CL:0002427,4.27e-14,6;CL:0002428,4.27e-14,6;CL:0002429,4.27e-14,6;CL:0002433,4.27e-14,6;CL:0002431,4.27e-14,6;CL:0002432,4.27e-14,6;CL:0000738,8.36e-12,17;CL:0002087,8.36e-12,17;CL:0000988,2.17e-10,32;CL:0002032,2.17e-10,32;CL:0000037,2.17e-10,32;CL:0000837,2.17e-10,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.70e-17!29;UBERON:0002193!3.13e-15!48;UBERON:0002370!7.99e-15!23;UBERON:0000974!7.99e-15!23;UBERON:0004807!7.99e-15!23;UBERON:0005058!7.99e-15!23;UBERON:0003351!7.99e-15!23;UBERON:0009113!7.99e-15!23;UBERON:0003295!7.99e-15!23;UBERON:0009722!7.99e-15!23;UBERON:0005562!7.99e-15!23;UBERON:0007690!7.99e-15!23;UBERON:0006562!7.02e-14!24;UBERON:0003408!7.02e-14!24;UBERON:0001557!7.02e-14!24;UBERON:0001042!7.02e-14!24;UBERON:0008814!7.02e-14!24;UBERON:0009145!7.02e-14!24;UBERON:0002390!1.92e-13!45;UBERON:0003061!1.92e-13!45;UBERON:0000065!1.87e-12!41;UBERON:0001004!6.41e-12!42;UBERON:0000072!1.72e-11!27;UBERON:0002405!7.11e-11!70;UBERON:0005057!1.90e-10!51;UBERON:0000063!5.82e-09!35;UBERON:0001041!2.99e-08!92;UBERON:0004119!7.52e-08!130;UBERON:0000925!7.52e-08!130;UBERON:0006595!7.52e-08!130;UBERON:0000077!8.88e-08!97;UBERON:0001007!1.21e-07!128;UBERON:0001555!1.21e-07!128;UBERON:0007026!1.21e-07!128;UBERON:0005911!2.29e-07!69;UBERON:0004921!5.08e-07!126;UBERON:0004185!5.08e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.10e-31,29;UBERON:0005057,2.10e-31,29;UBERON:0002370,1.37e-30,23;UBERON:0000974,1.37e-30,23;UBERON:0004807,1.37e-30,23;UBERON:0005058,1.37e-30,23;UBERON:0003351,1.37e-30,23;UBERON:0009113,1.37e-30,23;UBERON:0003295,1.37e-30,23;UBERON:0009722,1.37e-30,23;UBERON:0005562,1.37e-30,23;UBERON:0007690,1.37e-30,23;UBERON:0006562,4.27e-29,24;UBERON:0003408,4.27e-29,24;UBERON:0001557,4.27e-29,24;UBERON:0001042,4.27e-29,24;UBERON:0008814,4.27e-29,24;UBERON:0009145,4.27e-29,24;UBERON:0002193,1.93e-26,48;UBERON:0002405,1.93e-26,48;UBERON:0002390,3.30e-26,45;UBERON:0003061,3.30e-26,45;UBERON:0000072,2.78e-25,27;UBERON:0000077,5.41e-25,35;UBERON:0000065,3.93e-22,41;UBERON:0001004,1.85e-21,42;UBERON:0007811,1.14e-17,36;UBERON:0000153,5.73e-14,43;UBERON:0003081,2.57e-12,87;UBERON:0001041,1.49e-11,80;UBERON:0005911,9.91e-11,69;UBERON:0003929,7.55e-10,55;UBERON:0002368,1.08e-09,60;UBERON:0000949,5.33e-09,72;UBERON:0002530,1.45e-08,65;UBERON:0004921,1.97e-08,114;UBERON:0001007,3.62e-08,116;UBERON:0001555,3.62e-08,116;UBERON:0007026,3.62e-08,116;UBERON:0004119,6.52e-08,118;UBERON:0000925,6.52e-08,118;UBERON:0006595,6.52e-08,118;UBERON:0000926,8.59e-08,120;UBERON:0004120,8.59e-08,120;UBERON:0006603,8.59e-08,120;UBERON:0000490,2.01e-07,66|phase1_expression=0,0,0,0,0,0,0,32.9264474776019,245.253953988203,269.408269796614,170.361878384377,100.353376016133,60.9474598555092,45.7208704651356,0.666219523631325,1.82227740650843,0,4.88966356305268,5.89592064504677,5.09267582157636,0.850432901510698,1.98581902401771,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0.380046838912748,0.756090389279792,1.33038306393183,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,61.6557820709643,124.018611883569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,30.5546702703663,1.92974780784272,0,0,0,0.150722640552623,0,0,0,1.3013942122792,1.76922110389975,0,0,0,0,0,0,1.78819938646014,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0.292399974850665,0,0,0,0,4.29544417878937,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0.370191491765402,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0,0,3.69506380333209,0,0,0,0,0.502518772325447,0,0,0.315270288212382,0.664394068946325,0.318909537314974,1.80249646187312,1.20879487306127,1.44649058581512,0,0,0.491764273019036,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,1.26414703174326,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0.492422699235184,0,0,5.80960994712699,0,0.555583582109135,0.565105371014073,3.2806614653046,2.51655990527175,1.35982743995084,0.69975726161829,0.552799895217695,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,23.7008340471134,0,2.05421914329655,4.93699127315621,7.51912121803422,15.4971456729387,14.5436493919162,15.6550898805052,20.0923235396814,15.927222590895,23.2908487666102,26.7034593226922,25.688561717968,30.5048714693895,0,0,0,0,0,0.750729901804728,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0|short_description=p3@Itk}} | ||
|EntrezGene=16428 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=Q5STT8,Q03526,Q5STT7,A1A560,A6PWE2,Q3U5G1 | |||
|association_with_transcript=0bp_to_ENSMUST00000020664,NM_010583,uc007iog.1,uc007ioh.1,uc007ioi.1,uc011xtm.1,uc011xtn.1,uc011xto.1_5end | |||
|description=CAGE_peak_3_at_Itk_5end | |||
|id=chr11:46203011..46203027,- | |||
|ontology_enrichment_celltype=CL:0000838!6.56e-12!12;CL:0000084!8.30e-12!11;CL:0000827!8.30e-12!11;CL:0000791!8.01e-11!9;CL:0000789!8.01e-11!9;CL:0002420!8.01e-11!9;CL:0002419!8.01e-11!9;CL:0000790!8.01e-11!9;CL:0000542!1.20e-10!13;CL:0000051!1.20e-10!13;CL:0000624!8.86e-10!8;CL:0002031!1.08e-08!25;CL:0000893!9.00e-08!6;CL:0002489!9.00e-08!6;CL:0000898!9.00e-08!6;CL:0000809!9.00e-08!6;CL:0000810!9.00e-08!6;CL:0000895!9.00e-08!6;CL:0000808!9.00e-08!6;CL:0000894!9.00e-08!6;CL:0000806!9.00e-08!6;CL:0000807!9.00e-08!6;CL:0000805!9.00e-08!6;CL:0002425!9.00e-08!6;CL:0002436!9.00e-08!6;CL:0002427!9.00e-08!6;CL:0002428!9.00e-08!6;CL:0002429!9.00e-08!6;CL:0002433!9.00e-08!6;CL:0002431!9.00e-08!6;CL:0002432!9.00e-08!6;CL:0000738!3.78e-07!17;CL:0002087!3.78e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.01e-20,9;CL:0000789,3.01e-20,9;CL:0002420,3.01e-20,9;CL:0002419,3.01e-20,9;CL:0000790,3.01e-20,9;CL:0000084,1.46e-19,11;CL:0000827,1.46e-19,11;CL:0000624,3.86e-18,8;CL:0000838,9.95e-18,12;CL:0000542,3.54e-16,13;CL:0000051,3.54e-16,13;CL:0002031,2.73e-14,25;CL:0000893,4.27e-14,6;CL:0002489,4.27e-14,6;CL:0000898,4.27e-14,6;CL:0000809,4.27e-14,6;CL:0000810,4.27e-14,6;CL:0000895,4.27e-14,6;CL:0000808,4.27e-14,6;CL:0000894,4.27e-14,6;CL:0000806,4.27e-14,6;CL:0000807,4.27e-14,6;CL:0000805,4.27e-14,6;CL:0002425,4.27e-14,6;CL:0002436,4.27e-14,6;CL:0002427,4.27e-14,6;CL:0002428,4.27e-14,6;CL:0002429,4.27e-14,6;CL:0002433,4.27e-14,6;CL:0002431,4.27e-14,6;CL:0002432,4.27e-14,6;CL:0000738,8.36e-12,17;CL:0002087,8.36e-12,17;CL:0000988,2.17e-10,32;CL:0002032,2.17e-10,32;CL:0000037,2.17e-10,32;CL:0000837,2.17e-10,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.70e-17!29;UBERON:0002193!3.13e-15!48;UBERON:0002370!7.99e-15!23;UBERON:0000974!7.99e-15!23;UBERON:0004807!7.99e-15!23;UBERON:0005058!7.99e-15!23;UBERON:0003351!7.99e-15!23;UBERON:0009113!7.99e-15!23;UBERON:0003295!7.99e-15!23;UBERON:0009722!7.99e-15!23;UBERON:0005562!7.99e-15!23;UBERON:0007690!7.99e-15!23;UBERON:0006562!7.02e-14!24;UBERON:0003408!7.02e-14!24;UBERON:0001557!7.02e-14!24;UBERON:0001042!7.02e-14!24;UBERON:0008814!7.02e-14!24;UBERON:0009145!7.02e-14!24;UBERON:0002390!1.92e-13!45;UBERON:0003061!1.92e-13!45;UBERON:0000065!1.87e-12!41;UBERON:0001004!6.41e-12!42;UBERON:0000072!1.72e-11!27;UBERON:0002405!7.11e-11!70;UBERON:0005057!1.90e-10!51;UBERON:0000063!5.82e-09!35;UBERON:0001041!2.99e-08!92;UBERON:0004119!7.52e-08!130;UBERON:0000925!7.52e-08!130;UBERON:0006595!7.52e-08!130;UBERON:0000077!8.88e-08!97;UBERON:0001007!1.21e-07!128;UBERON:0001555!1.21e-07!128;UBERON:0007026!1.21e-07!128;UBERON:0005911!2.29e-07!69;UBERON:0004921!5.08e-07!126;UBERON:0004185!5.08e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.10e-31,29;UBERON:0005057,2.10e-31,29;UBERON:0002370,1.37e-30,23;UBERON:0000974,1.37e-30,23;UBERON:0004807,1.37e-30,23;UBERON:0005058,1.37e-30,23;UBERON:0003351,1.37e-30,23;UBERON:0009113,1.37e-30,23;UBERON:0003295,1.37e-30,23;UBERON:0009722,1.37e-30,23;UBERON:0005562,1.37e-30,23;UBERON:0007690,1.37e-30,23;UBERON:0006562,4.27e-29,24;UBERON:0003408,4.27e-29,24;UBERON:0001557,4.27e-29,24;UBERON:0001042,4.27e-29,24;UBERON:0008814,4.27e-29,24;UBERON:0009145,4.27e-29,24;UBERON:0002193,1.93e-26,48;UBERON:0002405,1.93e-26,48;UBERON:0002390,3.30e-26,45;UBERON:0003061,3.30e-26,45;UBERON:0000072,2.78e-25,27;UBERON:0000077,5.41e-25,35;UBERON:0000065,3.93e-22,41;UBERON:0001004,1.85e-21,42;UBERON:0007811,1.14e-17,36;UBERON:0000153,5.73e-14,43;UBERON:0003081,2.57e-12,87;UBERON:0001041,1.49e-11,80;UBERON:0005911,9.91e-11,69;UBERON:0003929,7.55e-10,55;UBERON:0002368,1.08e-09,60;UBERON:0000949,5.33e-09,72;UBERON:0002530,1.45e-08,65;UBERON:0004921,1.97e-08,114;UBERON:0001007,3.62e-08,116;UBERON:0001555,3.62e-08,116;UBERON:0007026,3.62e-08,116;UBERON:0004119,6.52e-08,118;UBERON:0000925,6.52e-08,118;UBERON:0006595,6.52e-08,118;UBERON:0000926,8.59e-08,120;UBERON:0004120,8.59e-08,120;UBERON:0006603,8.59e-08,120;UBERON:0000490,2.01e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,32.9264474776019,245.253953988203,269.408269796614,170.361878384377,100.353376016133,60.9474598555092,45.7208704651356,0.666219523631325,1.82227740650843,0,4.88966356305268,5.89592064504677,5.09267582157636,0.850432901510698,1.98581902401771,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0.380046838912748,0.756090389279792,1.33038306393183,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,61.6557820709643,124.018611883569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,30.5546702703663,1.92974780784272,0,0,0,0.150722640552623,0,0,0,1.3013942122792,1.76922110389975,0,0,0,0,0,0,1.78819938646014,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0.292399974850665,0,0,0,0,4.29544417878937,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0.370191491765402,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0,0,3.69506380333209,0,0,0,0,0.502518772325447,0,0,0.315270288212382,0.664394068946325,0.318909537314974,1.80249646187312,1.20879487306127,1.44649058581512,0,0,0.491764273019036,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,1.26414703174326,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0.492422699235184,0,0,5.80960994712699,0,0.555583582109135,0.565105371014073,3.2806614653046,2.51655990527175,1.35982743995084,0.69975726161829,0.552799895217695,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,23.7008340471134,0,2.05421914329655,4.93699127315621,7.51912121803422,15.4971456729387,14.5436493919162,15.6550898805052,20.0923235396814,15.927222590895,23.2908487666102,26.7034593226922,25.688561717968,30.5048714693895,0,0,0,0,0,0.750729901804728,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0 | |||
|short_description=p3@Itk | |||
}} |
Revision as of 19:44, 12 September 2013
Short description: | p3@Itk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Itk_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000020664, NM_010583, uc007iog.1, uc007ioh.1, uc007ioi.1, uc011xtm.1, uc011xtn.1, uc011xto.1_5end |
EntrezGene: | Itk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.