FFCP PHASE1:Mm9::chr11:78136653..78136668,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11676|HGNC=|MCL_coexpression_id=607|UniProt=|association_with_transcript=-1bp_to_ENSMUST00000148689_5end|description=CAGE_peak_3_at_Aldoc_5end|id=chr11:78136653..78136668,+|ontology_enrichment_celltype=CL:0000117!5.94e-11!23;CL:0000337!5.94e-11!23;CL:0000221!6.36e-11!44;CL:0000133!6.36e-11!44;CL:0002319!1.71e-10!43;CL:0000540!2.63e-07!33;CL:0000047!2.63e-07!33;CL:0000031!2.63e-07!33;CL:0000404!2.63e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.12e-13,23;CL:0000337,2.12e-13,23;CL:0000221,3.66e-13,44;CL:0000133,3.66e-13,44;CL:0002319,1.26e-12,43;CL:0000540,1.05e-08,33;CL:0000047,1.05e-08,33;CL:0000031,1.05e-08,33;CL:0000404,1.05e-08,33;CL:0002453,2.67e-07,8;CL:0002321,5.03e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.04e-27!73;UBERON:0005743!2.04e-27!73;UBERON:0000073!3.60e-26!75;UBERON:0001016!3.60e-26!75;UBERON:0001049!1.09e-25!52;UBERON:0005068!1.09e-25!52;UBERON:0006241!1.09e-25!52;UBERON:0007135!1.09e-25!52;UBERON:0000955!1.45e-24!50;UBERON:0006238!1.45e-24!50;UBERON:0002616!5.42e-24!49;UBERON:0000033!7.33e-24!63;UBERON:0004121!4.50e-23!102;UBERON:0000924!4.50e-23!102;UBERON:0006601!4.50e-23!102;UBERON:0002346!3.46e-20!71;UBERON:0003075!3.46e-20!71;UBERON:0007284!3.46e-20!71;UBERON:0003080!8.02e-18!40;UBERON:0002020!1.11e-17!34;UBERON:0002780!3.47e-17!39;UBERON:0001890!3.47e-17!39;UBERON:0006240!3.47e-17!39;UBERON:0003056!5.59e-17!49;UBERON:0002791!6.17e-15!29;UBERON:0003528!6.17e-15!29;UBERON:0001893!6.17e-15!29;UBERON:0000956!7.68e-12!21;UBERON:0001869!7.68e-12!21;UBERON:0000203!7.68e-12!21;UBERON:0002619!5.14e-10!17;UBERON:0007811!1.33e-09!86;UBERON:0003076!1.64e-08!12;UBERON:0003057!1.64e-08!12;UBERON:0000153!6.10e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.32e-33,73;UBERON:0000073,1.61e-32,54;UBERON:0001016,2.32e-31,75;UBERON:0001049,7.31e-31,52;UBERON:0005068,7.31e-31,52;UBERON:0006241,7.31e-31,52;UBERON:0007135,7.31e-31,52;UBERON:0004121,2.23e-27,95;UBERON:0000924,2.23e-27,95;UBERON:0006601,2.23e-27,95;UBERON:0002346,3.21e-27,64;UBERON:0003075,3.21e-27,64;UBERON:0007284,3.21e-27,64;UBERON:0000955,6.80e-27,47;UBERON:0006238,6.80e-27,47;UBERON:0002616,3.44e-26,46;UBERON:0010371,4.02e-26,73;UBERON:0002020,6.89e-22,34;UBERON:0003080,5.09e-21,40;UBERON:0002780,3.16e-20,39;UBERON:0001890,3.16e-20,39;UBERON:0006240,3.16e-20,39;UBERON:0003056,2.32e-19,49;UBERON:0003528,2.01e-18,29;UBERON:0002791,2.01e-18,29;UBERON:0001893,2.01e-18,29;UBERON:0010314,7.68e-15,92;UBERON:0000956,1.61e-14,21;UBERON:0001869,1.61e-14,21;UBERON:0000203,1.61e-14,21;UBERON:0002619,3.22e-12,17;UBERON:0003076,2.52e-10,12;UBERON:0003057,2.52e-10,12;UBERON:0002021,4.91e-08,10;UBERON:0000411,4.91e-08,10;UBERON:0001950,4.91e-08,10;UBERON:0000025,1.57e-07,114;UBERON:0004111,6.72e-07,122|phase1_expression=7.52699581392532,2.09385244583617,1.81999695755814,2.41971369045464,1.00179145989269,0,0.700837921786577,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,37.1639177960175,0,0,0.95995453676044,0.68822784320151,0.57423196411502,0.430761996159075,1.50829862880122,0.760093677825496,0,0,1.27006134691926,0.61506478758457,0,1.44425809875637,1.16364251750945,2.6542016314108,0,0,0,0,0,0,0,0,0,14.0830441982647,273.185520944699,607.21260907808,387.498788855047,86.2316357212233,107.814423273729,0,0,0.336093799142464,0,0,0,4.45096213891115,3.70293685490423,5.07065122804943,5.42151251310611,17.7858959222228,0,0,0,47.3368174619079,109.886435321965,13.5833392124106,12.4205463265155,12.1988477583802,136.541170545018,113.526430049129,4.89963196859816,4.2172007248024,5.51531271966013,80.3845931295537,142.75444397924,188.014396705642,2.2420668914133,3.01909223887952,1.04182674111352,250.147967105237,136.188551627667,169.911651527813,45.0781735774712,52.3927785340699,13.9799584368975,0.151452386666368,0.151143120213571,0.579728977403356,0,1.3599426674155,0,0,0,8.14577636764161,0,0,0,15.6336195952115,0,0,0,0.432982082022428,0.760079596425296,0,5.02409070763864,0,0.29688427812965,0.173485326766136,0.304465478312141,0.922461989024234,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0,0,212.558858630383,430.831875915277,0.510914110417183,0,0,0,122.528743033145,73.6575970537989,10.3036568732549,120.981726853824,167.237909094036,137.555685498429,139.527486238272,0.203678727700633,0.622034853050465,2.0217820674694,6.73413938836717,0.130120442962704,0,0.360124259610698,0.90422890701429,2.85753296435577,1.2811372028485,2.43624483855295,13.1938719076898,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.696504333044333,1.4404749548556,0.398068533636986,0,0,0,0.414251545071004,0,0.36012412292203,0.710234206755631,0.590292695242212,1.3884040159864,1.39520366850245,0.536546802799238,0.817357396570186,0.16455984991348,0,0,0,0,0,109.140483304782,16.8763564302026,2.64335026387038,0.264450566663544,0.213288250535234,0,0.38660238396628,0.605050573870028,0.22237804384487,0.3804512522251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| ||
|EntrezGene=11676 | |||
|HGNC= | |||
|MCL_coexpression_id=607 | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENSMUST00000148689_5end | |||
|description=CAGE_peak_3_at_Aldoc_5end | |||
|id=chr11:78136653..78136668,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.94e-11!23;CL:0000337!5.94e-11!23;CL:0000221!6.36e-11!44;CL:0000133!6.36e-11!44;CL:0002319!1.71e-10!43;CL:0000540!2.63e-07!33;CL:0000047!2.63e-07!33;CL:0000031!2.63e-07!33;CL:0000404!2.63e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.12e-13,23;CL:0000337,2.12e-13,23;CL:0000221,3.66e-13,44;CL:0000133,3.66e-13,44;CL:0002319,1.26e-12,43;CL:0000540,1.05e-08,33;CL:0000047,1.05e-08,33;CL:0000031,1.05e-08,33;CL:0000404,1.05e-08,33;CL:0002453,2.67e-07,8;CL:0002321,5.03e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.04e-27!73;UBERON:0005743!2.04e-27!73;UBERON:0000073!3.60e-26!75;UBERON:0001016!3.60e-26!75;UBERON:0001049!1.09e-25!52;UBERON:0005068!1.09e-25!52;UBERON:0006241!1.09e-25!52;UBERON:0007135!1.09e-25!52;UBERON:0000955!1.45e-24!50;UBERON:0006238!1.45e-24!50;UBERON:0002616!5.42e-24!49;UBERON:0000033!7.33e-24!63;UBERON:0004121!4.50e-23!102;UBERON:0000924!4.50e-23!102;UBERON:0006601!4.50e-23!102;UBERON:0002346!3.46e-20!71;UBERON:0003075!3.46e-20!71;UBERON:0007284!3.46e-20!71;UBERON:0003080!8.02e-18!40;UBERON:0002020!1.11e-17!34;UBERON:0002780!3.47e-17!39;UBERON:0001890!3.47e-17!39;UBERON:0006240!3.47e-17!39;UBERON:0003056!5.59e-17!49;UBERON:0002791!6.17e-15!29;UBERON:0003528!6.17e-15!29;UBERON:0001893!6.17e-15!29;UBERON:0000956!7.68e-12!21;UBERON:0001869!7.68e-12!21;UBERON:0000203!7.68e-12!21;UBERON:0002619!5.14e-10!17;UBERON:0007811!1.33e-09!86;UBERON:0003076!1.64e-08!12;UBERON:0003057!1.64e-08!12;UBERON:0000153!6.10e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.32e-33,73;UBERON:0000073,1.61e-32,54;UBERON:0001016,2.32e-31,75;UBERON:0001049,7.31e-31,52;UBERON:0005068,7.31e-31,52;UBERON:0006241,7.31e-31,52;UBERON:0007135,7.31e-31,52;UBERON:0004121,2.23e-27,95;UBERON:0000924,2.23e-27,95;UBERON:0006601,2.23e-27,95;UBERON:0002346,3.21e-27,64;UBERON:0003075,3.21e-27,64;UBERON:0007284,3.21e-27,64;UBERON:0000955,6.80e-27,47;UBERON:0006238,6.80e-27,47;UBERON:0002616,3.44e-26,46;UBERON:0010371,4.02e-26,73;UBERON:0002020,6.89e-22,34;UBERON:0003080,5.09e-21,40;UBERON:0002780,3.16e-20,39;UBERON:0001890,3.16e-20,39;UBERON:0006240,3.16e-20,39;UBERON:0003056,2.32e-19,49;UBERON:0003528,2.01e-18,29;UBERON:0002791,2.01e-18,29;UBERON:0001893,2.01e-18,29;UBERON:0010314,7.68e-15,92;UBERON:0000956,1.61e-14,21;UBERON:0001869,1.61e-14,21;UBERON:0000203,1.61e-14,21;UBERON:0002619,3.22e-12,17;UBERON:0003076,2.52e-10,12;UBERON:0003057,2.52e-10,12;UBERON:0002021,4.91e-08,10;UBERON:0000411,4.91e-08,10;UBERON:0001950,4.91e-08,10;UBERON:0000025,1.57e-07,114;UBERON:0004111,6.72e-07,122 | |||
|phase1_expression=7.52699581392532,2.09385244583617,1.81999695755814,2.41971369045464,1.00179145989269,0,0.700837921786577,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,37.1639177960175,0,0,0.95995453676044,0.68822784320151,0.57423196411502,0.430761996159075,1.50829862880122,0.760093677825496,0,0,1.27006134691926,0.61506478758457,0,1.44425809875637,1.16364251750945,2.6542016314108,0,0,0,0,0,0,0,0,0,14.0830441982647,273.185520944699,607.21260907808,387.498788855047,86.2316357212233,107.814423273729,0,0,0.336093799142464,0,0,0,4.45096213891115,3.70293685490423,5.07065122804943,5.42151251310611,17.7858959222228,0,0,0,47.3368174619079,109.886435321965,13.5833392124106,12.4205463265155,12.1988477583802,136.541170545018,113.526430049129,4.89963196859816,4.2172007248024,5.51531271966013,80.3845931295537,142.75444397924,188.014396705642,2.2420668914133,3.01909223887952,1.04182674111352,250.147967105237,136.188551627667,169.911651527813,45.0781735774712,52.3927785340699,13.9799584368975,0.151452386666368,0.151143120213571,0.579728977403356,0,1.3599426674155,0,0,0,8.14577636764161,0,0,0,15.6336195952115,0,0,0,0.432982082022428,0.760079596425296,0,5.02409070763864,0,0.29688427812965,0.173485326766136,0.304465478312141,0.922461989024234,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0,0,212.558858630383,430.831875915277,0.510914110417183,0,0,0,122.528743033145,73.6575970537989,10.3036568732549,120.981726853824,167.237909094036,137.555685498429,139.527486238272,0.203678727700633,0.622034853050465,2.0217820674694,6.73413938836717,0.130120442962704,0,0.360124259610698,0.90422890701429,2.85753296435577,1.2811372028485,2.43624483855295,13.1938719076898,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.696504333044333,1.4404749548556,0.398068533636986,0,0,0,0.414251545071004,0,0.36012412292203,0.710234206755631,0.590292695242212,1.3884040159864,1.39520366850245,0.536546802799238,0.817357396570186,0.16455984991348,0,0,0,0,0,109.140483304782,16.8763564302026,2.64335026387038,0.264450566663544,0.213288250535234,0,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.397912944082302,0.38992817423824,0,0.648414149624083,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,1.32849133181642,2.35498091762062,2.83813477020141,0.296452627087149,0,0.393117990226406,0.674586337154561,0.608580364165509,1.20588579876208,3.31013607315846,5.4662266115654,0.324270453550071,1.09824565275233,0,0.744281895337007,0.312037673114561,0.505157755894224,1.61457672169721,0,0.369506380333209,0.189491411770485,0,0,0,0,0.714130922658041,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,130.317532350045,14.0727740615414,241.307536751651,275.447463491677,0,0.252470927204373,0,0,1.07711698866399,0,0,0.283076530788832,1.21443210502468,0.876767573733936,0.790575555893047,64.2642632843614,5.96148357874728,1.06839362200353,0.977321756121456,8.24850614862677,0,0.242780636154981,0.302323556964751,0.943025398779491,2.36241514304618,3.3817866273832,0.775284879504663,2.54473610634254,2.49548164869305,1.26414703174326,0,0,9.87274856685985,0.540183282093931,0.388076051348264,1.50035924522115,1.59606210278046,5.52943334566419,4.93647061806363,28.3152402676577,0.704015124191131,0,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.492422699235184,0.582961673259701,266.085308385081,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0.158167996790568,0.406638934253697,0.756037385752609,1.04544148007234,1.74690050996942,0.269728692769641,0.495920734352016,0.26175594198403,0.259229946583586,0.621339313086926,0,0.299033092087958,0.66183396182839,0.388902376688095,0.645799117388655,0.506868376472335,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.608175645870493,0,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0,0,0.19318959403219,0.187682475451182,3.11357761254351,0.214368379079066,0,51.9571695207701,71.3504116586124,68.7474616127276,108.095651694179,98.6518828469725,100.46738835283,78.9776325271213,101.32227072545,99.2381875675408,88.0192529978094,0.103787347584177,0,0.682934423016537,1.70174701947806,1.25767897576789,1.47074806760011,1.55572709461131,1.03017528619447,1.28367683836726,1.51618327058278,1.2673964994512,1.32038438970253,3.46473577638565,2.56100609619477,3.27382173046996,3.81034953026459,2.78122382267653,3.47236596834669,2.47251540481984,1.91358596174717,3.08582327146874,1.77475806159337,1.90748951957857,2.32554266611726,1.59985946706062,2.28459441307527,2.74391959309159,2.89376682581627,2.58027816307137,2.24456908663095,2.25406534435931,4.23569274214923,1.63692417267876,3.09873682371932,1.92906610981141,2.49810577937946,1.63752125911786,2.79332370262788,2.486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| |||
|short_description=p3@Aldoc | |||
}} |
Revision as of 21:02, 12 September 2013
Short description: | p3@Aldoc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Aldoc_5end |
Coexpression cluster: | MCL_coexpression_mm9:607 |
Association with transcript: | -1bp_to_ENSMUST00000148689_5end |
EntrezGene: | Aldoc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.12e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.12e-13 | 23 |
ectodermal cell | 3.66e-13 | 44 |
neurectodermal cell | 3.66e-13 | 44 |
neural cell | 1.26e-12 | 43 |
neuron | 1.05e-08 | 33 |
neuronal stem cell | 1.05e-08 | 33 |
neuroblast | 1.05e-08 | 33 |
electrically signaling cell | 1.05e-08 | 33 |
oligodendrocyte precursor cell | 2.67e-07 | 8 |
embryonic cell | 5.03e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.