FFCP PHASE1:Mm9::chr11:86444564..86444566,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=81|UniProt=|association_with_transcript=-36bp_to_ENSMUST00000117851_5end|description=CAGE_peak_1_at_ENSMUST00000117851_5end|id=chr11:86444564..86444566,-|ontology_enrichment_celltype=CL:0000063!4.66e-16!66;CL:0000988!6.99e-13!32;CL:0002032!6.99e-13!32;CL:0000037!6.99e-13!32;CL:0000566!6.99e-13!32;CL:0000837!6.99e-13!32;CL:0002320!1.30e-11!46;CL:0000134!1.30e-11!46;CL:0000219!1.71e-10!54;CL:0002031!1.75e-10!25;CL:0000838!1.22e-08!12;CL:0000144!1.56e-08!121;CL:0000012!1.56e-08!121;CL:0000738!4.17e-08!17;CL:0002087!4.17e-08!17;CL:0000084!6.01e-08!11;CL:0000827!6.01e-08!11;CL:0000542!6.43e-08!13;CL:0000051!6.43e-08!13;CL:0002371!1.41e-07!118;CL:0000548!3.04e-07!115;CL:0000004!3.04e-07!115;CL:0000255!3.04e-07!115;CL:0000791!3.74e-07!9;CL:0000789!3.74e-07!9;CL:0002420!3.74e-07!9;CL:0002419!3.74e-07!9;CL:0000790!3.74e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.98e-14,32;CL:0002032,1.98e-14,32;CL:0000037,1.98e-14,32;CL:0000837,1.98e-14,32;CL:0002320,1.04e-12,46;CL:0000134,1.04e-12,46;CL:0002031,4.25e-12,25;CL:0000219,7.62e-12,54;CL:0000838,1.43e-09,12;CL:0000084,8.68e-09,11;CL:0000827,8.68e-09,11;CL:0000738,1.03e-08,17;CL:0002087,1.03e-08,17;CL:0000542,2.52e-08,13;CL:0000051,2.52e-08,13;CL:0000791,6.85e-08,9;CL:0000789,6.85e-08,9;CL:0002420,6.85e-08,9;CL:0002419,6.85e-08,9;CL:0000790,6.85e-08,9;CL:0000049,1.75e-07,19;CL:0000624,4.00e-07,8;CL:0000034,6.20e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.30e-11!46;UBERON:0002193!1.53e-09!48;UBERON:0002390!6.37e-09!45;UBERON:0003061!6.37e-09!45;UBERON:0002405!1.73e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.04e-12,46;UBERON:0002193,1.82e-09,48;UBERON:0002405,1.82e-09,48;UBERON:0002390,5.52e-09,45;UBERON:0003061,5.52e-09,45|phase1_expression=1.92178616525753,0.348975407639361,0,4.23449895829562,3.50627010962443,1.51091344720701,13.315920513945,26.3411579820816,55.1891790834534,35.343743474621,36.8118631684836,9.4131147614497,66.0834817534454,27.7996879692412,1.99865857089398,30.9787159106434,23.0855419782288,53.6285681109004,54.571544575084,61.1121098589163,0.255129870453209,1.98581902401771,37.6127696360067,15.0392877425802,16.2880589557691,0,1.29228598847722,1.939241094173,8.93110071444957,1.26015064879965,1.55211357458713,13.3356441426523,0.61506478758457,0,3.46621943701529,3.98963148860382,4.08338712524738,1.67412652294763,1.5626706890476,1.0470474879476,0.588231488031014,2.04913645487534,0.971020706062307,0.881277725829041,0.912392380975631,1.28482726513177,3.12956537739216,0.436050312760893,0.219686182734472,0.58328969722285,0.279972843250725,1.43752564364972,66.7774772109791,70.3601277751004,63.1856342387832,1.54355661621568,1.71920063963254,2.57836046138721,0.809265843438391,0,0,3.72728985276045,0.889294796111139,0,1.97773272513395,1.4209602298922,2.09720077362883,0.384218305321555,0.933206510776299,1.08004750665353,1.47227472945967,0.285650984403804,0.662605622854841,1.83736198822431,1.0543001812006,0.919218786610021,0,0.127687338085188,0.153606533256243,0.923204014111357,0.731901148819277,0.52091337055676,0.558365998002762,1.12552522006336,0.30559649555362,0,0.142371680799103,0.931997229126503,12.9491790599745,12.7715936580468,12.7540375028738,19.7897491705719,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0.511290967734173,12.4697282209377,19.0803370235584,2.53518155598025,16.6824420638613,15.2883143823987,28.4426681261332,22.2985772241551,24.0691872201344,31.3425155909166,0.34255163915718,0.776813650941515,1.03909497345377,1.73485326766136,2.74018930480927,0.230615497256059,0.452167921657868,1.05829836422134,0.376999773989026,0.247194967734374,0.578397427679647,0,1.13236794963186,0.441683036920787,0.484875253135222,1.86391761218122,0.585561594023094,0.209446706813455,1.02182822083437,3.95389910869537,19.196887391789,5.84523044536098,0.748953197024114,0.915001205637253,0.879580464790051,1.04294592115366,0.511430914660661,0.20778804455956,0.162241263067758,0.509196819251581,1.11966273549084,2.52722758433675,0.420883711772948,1.56144531555244,1.14951052216736,1.0803727788321,0.30140963567143,0.204109497453984,0.384341160854549,0.562210347358373,0.517406741478031,1.07783996466421,0.756424320671277,1.40760899331159,1.09597866213787,2.78047249225598,0.696504333044333,1.64625709126355,1.59227413454795,22.4708219940235,13.3820911699652,2.55747149456033,0.621377317606506,2.11073453982987,1.2604344302271,0.710234206755631,1.57411385397923,0.771335564436891,0,0.536546802799238,0.934122738937356,0.493679549740441,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,0.841159794256509,0.205809224758569,0.330418782983798,0,0.853153002140936,0.232236671860439,0.257734922644187,0.605050573870028,0.889512175379481,2.09248188723815,1.42358718463353,1.31759163779209,2.5133520880027,2.18852119245266,0.58489226135736,0,0.432276099749388,0.597423819763102,1.89667900953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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|UniProt= | |||
|association_with_transcript=-36bp_to_ENSMUST00000117851_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000117851_5end | |||
|id=chr11:86444564..86444566,- | |||
|ontology_enrichment_celltype=CL:0000063!4.66e-16!66;CL:0000988!6.99e-13!32;CL:0002032!6.99e-13!32;CL:0000037!6.99e-13!32;CL:0000566!6.99e-13!32;CL:0000837!6.99e-13!32;CL:0002320!1.30e-11!46;CL:0000134!1.30e-11!46;CL:0000219!1.71e-10!54;CL:0002031!1.75e-10!25;CL:0000838!1.22e-08!12;CL:0000144!1.56e-08!121;CL:0000012!1.56e-08!121;CL:0000738!4.17e-08!17;CL:0002087!4.17e-08!17;CL:0000084!6.01e-08!11;CL:0000827!6.01e-08!11;CL:0000542!6.43e-08!13;CL:0000051!6.43e-08!13;CL:0002371!1.41e-07!118;CL:0000548!3.04e-07!115;CL:0000004!3.04e-07!115;CL:0000255!3.04e-07!115;CL:0000791!3.74e-07!9;CL:0000789!3.74e-07!9;CL:0002420!3.74e-07!9;CL:0002419!3.74e-07!9;CL:0000790!3.74e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.98e-14,32;CL:0002032,1.98e-14,32;CL:0000037,1.98e-14,32;CL:0000837,1.98e-14,32;CL:0002320,1.04e-12,46;CL:0000134,1.04e-12,46;CL:0002031,4.25e-12,25;CL:0000219,7.62e-12,54;CL:0000838,1.43e-09,12;CL:0000084,8.68e-09,11;CL:0000827,8.68e-09,11;CL:0000738,1.03e-08,17;CL:0002087,1.03e-08,17;CL:0000542,2.52e-08,13;CL:0000051,2.52e-08,13;CL:0000791,6.85e-08,9;CL:0000789,6.85e-08,9;CL:0002420,6.85e-08,9;CL:0002419,6.85e-08,9;CL:0000790,6.85e-08,9;CL:0000049,1.75e-07,19;CL:0000624,4.00e-07,8;CL:0000034,6.20e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.30e-11!46;UBERON:0002193!1.53e-09!48;UBERON:0002390!6.37e-09!45;UBERON:0003061!6.37e-09!45;UBERON:0002405!1.73e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.04e-12,46;UBERON:0002193,1.82e-09,48;UBERON:0002405,1.82e-09,48;UBERON:0002390,5.52e-09,45;UBERON:0003061,5.52e-09,45 | |||
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| |||
|short_description=p1@ENSMUST00000117851 | |||
}} |
Revision as of 21:18, 12 September 2013
Short description: | p1@ENSMUST00000117851 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000117851_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | -36bp_to_ENSMUST00000117851_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.98e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.98e-14 | 32 |
hematopoietic stem cell | 1.98e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.98e-14 | 32 |
connective tissue cell | 1.04e-12 | 46 |
mesenchymal cell | 1.04e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 4.25e-12 | 25 |
motile cell | 7.62e-12 | 54 |
lymphoid lineage restricted progenitor cell | 1.43e-09 | 12 |
T cell | 8.68e-09 | 11 |
pro-T cell | 8.68e-09 | 11 |
leukocyte | 1.03e-08 | 17 |
nongranular leukocyte | 1.03e-08 | 17 |
lymphocyte | 2.52e-08 | 13 |
common lymphoid progenitor | 2.52e-08 | 13 |
mature alpha-beta T cell | 6.85e-08 | 9 |
alpha-beta T cell | 6.85e-08 | 9 |
immature T cell | 6.85e-08 | 9 |
mature T cell | 6.85e-08 | 9 |
immature alpha-beta T cell | 6.85e-08 | 9 |
common myeloid progenitor | 1.75e-07 | 19 |
CD4-positive, alpha-beta T cell | 4.00e-07 | 8 |
stem cell | 6.20e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.04e-12 | 46 |
hemolymphoid system | 1.82e-09 | 48 |
immune system | 1.82e-09 | 48 |
hematopoietic system | 5.52e-09 | 45 |
blood island | 5.52e-09 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.