FFCP PHASE1:Hg19::chr3:127541515..127541547,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11343|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17038|TSSclassifier=S|UniProt=Q99685,B3KRC2|association_with_transcript=153bp_to_ENST00000265052,NM_007283,uc003ejw.2,uc011bko.1_5end|coexpression_cluster_id=C6|description=CAGE_peak_4_at_MGLL_5end|id=chr3:127541515..127541547,-|ontology_enrichment_celltype=CL:0002139!1.52e-12!24;CL:0000071!1.77e-10!18;CL:0002546!1.77e-10!18;CL:0000115!2.92e-10!35;CL:0002078!3.61e-09!44;CL:1000413!3.29e-07!9|ontology_enrichment_celltype_v019=CL:0002139;2.12e-18;24!CL:0000071;7.06e-15;18!CL:0000115;8.53e-14;36!CL:1000413;1.47e-10;9!CL:0002078;1.21e-09;45!CL:0002544;1.84e-07;6|ontology_enrichment_celltype_v019_2=CL:0002139,2.55e-18,24;CL:0000115,7.29e-16,36;CL:0000071,6.36e-15,18;CL:0002546,6.36e-15,18;CL:0002078,2.24e-14,45;CL:1000413,9.57e-11,9;CL:0000213,3.84e-09,58;CL:0000215,3.84e-09,58;CL:0002544,1.30e-07,6|ontology_enrichment_development_v019=CL:0002546;7.06e-15;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.77e-10!18;UBERON:0004638!1.77e-10!18;UBERON:0004852!1.77e-10!18;UBERON:0000055!1.19e-09!69;UBERON:0001009!1.59e-09!113;UBERON:0002049!2.29e-09!79;UBERON:0007798!2.29e-09!79;UBERON:0000467!3.04e-09!625;UBERON:0000480!4.78e-09!626;UBERON:0004535!7.20e-09!110;UBERON:0001981!2.13e-08!60;UBERON:0007500!2.13e-08!60;UBERON:0004537!2.13e-08!60;UBERON:0006965!2.13e-08!60;UBERON:0000487!6.59e-08!22;UBERON:0003081!7.58e-08!216;UBERON:0000477!1.36e-07!286;UBERON:0000025!2.02e-07!194;UBERON:0004111!3.13e-07!241;UBERON:0003915!3.29e-07!9;UBERON:0004700!3.29e-07!9;UBERON:0001917!3.29e-07!9;UBERON:0007023!3.55e-07!115;UBERON:0000468!4.86e-07!659|ontology_enrichment_uberon_v019=UBERON:0004638;7.06e-15;18!UBERON:0001986;7.06e-15;18!UBERON:0004852;7.06e-15;18!UBERON:0000487;1.16e-12;22!UBERON:0003915;1.47e-10;9!UBERON:0004700;1.47e-10;9!UBERON:0001917;1.47e-10;9!UBERON:0006914;2.15e-10;25!UBERON:0000490;3.36e-07;33!UBERON:0001950;9.35e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.36e-15,18;UBERON:0001986,6.36e-15,18;UBERON:0004852,6.36e-15,18;UBERON:0000487,1.07e-12,22;UBERON:0003915,9.57e-11,9;UBERON:0004700,9.57e-11,9;UBERON:0001917,9.57e-11,9;UBERON:0006914,2.00e-10,25;UBERON:0000055,1.45e-09,68;UBERON:0003081,2.66e-09,203;UBERON:0001009,2.77e-09,112;UBERON:0004535,8.90e-09,109;UBERON:0000025,1.76e-08,192;UBERON:0002049,3.83e-08,78;UBERON:0007798,3.83e-08,78;UBERON:0004111,4.56e-08,240;UBERON:0001950,7.68e-08,20;UBERON:0002619,9.43e-08,22;UBERON:0002193,9.83e-08,108;UBERON:0007500,3.53e-07,59;UBERON:0001981,3.53e-07,59;UBERON:0004537,3.53e-07,59;UBERON:0006965,3.53e-07,59|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,2.45733936501509,4.18680700783456,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0.408001382488506,0,0,0,0,3.20936304141395,2.70931945184821,3.06972047123349,0.393364276848904,0.767658796194425,0.928896739896456,0,3.31326510656075,0.369754010166788,0,0,2.34880351467878,24.9297933839345,17.6479113773725,12.5866305015194,2.23915474239924,0.32389366601898,1.54545340580512,0,0,0,0,1.23350366406548,1.54853185447552,0,0,0.47296445977717,3.10271112662957,4.51839278508678,10.8341189275473,0.188242339542605,0,0.224723484445085,2.14258724659632,3.53021929783703,8.31138263538754,0,0,0,7.2552309657146,12.4824749432051,21.1759564658495,0,0,0,5.44859552370032,20.6235476153036,25.0005286078299,0,0.637812899895131,0.838634582033504,0,0,0,0.285012743741249,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,6.60856642895129,7.8471198817415,2.10707267820062,0.196709770113833,0,0.205601498999509,0,0,0,0,0.557052284425868,0,0,0,0,0.390178042679635,0.493313713811028,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.458426764241994,0.364295288292542,0.741568885568859,0.97364218096405,1.21890816109487,0.664789802594326,0.476981248610684,0,0.74291500265913,5.96287222100115,6.02164216574287,5.55424802572151,5.6530794192401,5.45349267072878,4.67700671298115,3.76190939766259,1.29208379584664,1.06729878806013,1.33888245105868,2.01414658554573,3.04108842287405,0.732186172644509,5.51494620518803,1.62028389576352,1.16089646769304,1.12264686313085,1.91439516821648,1.53316637465883,12.3404535743857,3.48083313467774,2.63560834872127,0,0.436094052142534,0.496971951695318,0.506522046658319,0.132409180813219,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,0.454072282934794,0,0.468642863667593,2.80944069147288,1.71141546463335,0.896692083310806,1.52664848236894,2.10434827678571,1.82586048712923,1.63323337003915,1.35117749042945,0.413303124703062,0,0.494533858557114,2.73048408581408,0,0.673344455816265,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17038 | |||
|TSSclassifier=S | |||
|UniProt=Q99685,B3KRC2 | |||
|association_with_transcript=153bp_to_ENST00000265052,NM_007283,uc003ejw.2,uc011bko.1_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_4_at_MGLL_5end | |||
|id=chr3:127541515..127541547,- | |||
|ontology_enrichment_celltype=CL:0002139!1.52e-12!24;CL:0000071!1.77e-10!18;CL:0002546!1.77e-10!18;CL:0000115!2.92e-10!35;CL:0002078!3.61e-09!44;CL:1000413!3.29e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.12e-18;24!CL:0000071;7.06e-15;18!CL:0000115;8.53e-14;36!CL:1000413;1.47e-10;9!CL:0002078;1.21e-09;45!CL:0002544;1.84e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.55e-18,24;CL:0000115,7.29e-16,36;CL:0000071,6.36e-15,18;CL:0002546,6.36e-15,18;CL:0002078,2.24e-14,45;CL:1000413,9.57e-11,9;CL:0000213,3.84e-09,58;CL:0000215,3.84e-09,58;CL:0002544,1.30e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.06e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.77e-10!18;UBERON:0004638!1.77e-10!18;UBERON:0004852!1.77e-10!18;UBERON:0000055!1.19e-09!69;UBERON:0001009!1.59e-09!113;UBERON:0002049!2.29e-09!79;UBERON:0007798!2.29e-09!79;UBERON:0000467!3.04e-09!625;UBERON:0000480!4.78e-09!626;UBERON:0004535!7.20e-09!110;UBERON:0001981!2.13e-08!60;UBERON:0007500!2.13e-08!60;UBERON:0004537!2.13e-08!60;UBERON:0006965!2.13e-08!60;UBERON:0000487!6.59e-08!22;UBERON:0003081!7.58e-08!216;UBERON:0000477!1.36e-07!286;UBERON:0000025!2.02e-07!194;UBERON:0004111!3.13e-07!241;UBERON:0003915!3.29e-07!9;UBERON:0004700!3.29e-07!9;UBERON:0001917!3.29e-07!9;UBERON:0007023!3.55e-07!115;UBERON:0000468!4.86e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.06e-15;18!UBERON:0001986;7.06e-15;18!UBERON:0004852;7.06e-15;18!UBERON:0000487;1.16e-12;22!UBERON:0003915;1.47e-10;9!UBERON:0004700;1.47e-10;9!UBERON:0001917;1.47e-10;9!UBERON:0006914;2.15e-10;25!UBERON:0000490;3.36e-07;33!UBERON:0001950;9.35e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.36e-15,18;UBERON:0001986,6.36e-15,18;UBERON:0004852,6.36e-15,18;UBERON:0000487,1.07e-12,22;UBERON:0003915,9.57e-11,9;UBERON:0004700,9.57e-11,9;UBERON:0001917,9.57e-11,9;UBERON:0006914,2.00e-10,25;UBERON:0000055,1.45e-09,68;UBERON:0003081,2.66e-09,203;UBERON:0001009,2.77e-09,112;UBERON:0004535,8.90e-09,109;UBERON:0000025,1.76e-08,192;UBERON:0002049,3.83e-08,78;UBERON:0007798,3.83e-08,78;UBERON:0004111,4.56e-08,240;UBERON:0001950,7.68e-08,20;UBERON:0002619,9.43e-08,22;UBERON:0002193,9.83e-08,108;UBERON:0007500,3.53e-07,59;UBERON:0001981,3.53e-07,59;UBERON:0004537,3.53e-07,59;UBERON:0006965,3.53e-07,59 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,2.45733936501509,4.18680700783456,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0.408001382488506,0,0,0,0,3.20936304141395,2.70931945184821,3.06972047123349,0.393364276848904,0.767658796194425,0.928896739896456,0,3.31326510656075,0.369754010166788,0,0,2.34880351467878,24.9297933839345,17.6479113773725,12.5866305015194,2.23915474239924,0.32389366601898,1.54545340580512,0,0,0,0,1.23350366406548,1.54853185447552,0,0,0.47296445977717,3.10271112662957,4.51839278508678,10.8341189275473,0.188242339542605,0,0.224723484445085,2.14258724659632,3.53021929783703,8.31138263538754,0,0,0,7.2552309657146,12.4824749432051,21.1759564658495,0,0,0,5.44859552370032,20.6235476153036,25.0005286078299,0,0.637812899895131,0.838634582033504,0,0,0,0.285012743741249,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,6.60856642895129,7.8471198817415,2.10707267820062,0.196709770113833,0,0.205601498999509,0,0,0,0,0.557052284425868,0,0,0,0,0.390178042679635,0.493313713811028,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.458426764241994,0.364295288292542,0.741568885568859,0.97364218096405,1.21890816109487,0.664789802594326,0.476981248610684,0,0.74291500265913,5.96287222100115,6.02164216574287,5.55424802572151,5.6530794192401,5.45349267072878,4.67700671298115,3.76190939766259,1.29208379584664,1.06729878806013,1.33888245105868,2.01414658554573,3.04108842287405,0.732186172644509,5.51494620518803,1.62028389576352,1.16089646769304,1.12264686313085,1.91439516821648,1.53316637465883,12.3404535743857,3.48083313467774,2.63560834872127,0,0.436094052142534,0.496971951695318,0.506522046658319,0.132409180813219,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,0.454072282934794,0,0.468642863667593,2.80944069147288,1.71141546463335,0.896692083310806,1.52664848236894,2.10434827678571,1.82586048712923,1.63323337003915,1.35117749042945,0.413303124703062,0,0.494533858557114,2.73048408581408,0,0.673344455816265,1.00094815897571,1.93944880838928,1.75591048352335,0.30648779579902,0.45071417671979,0,0.179389635688862,0.427114777637135,0.847727604638247,0.900273288253207,0.618315175430633,0.257640540045629,0.558350568994769,1.0126579934476,0.292311015483596,0,0.0920498986422993,0.161646056818812,0,0.302256294682921,1.3564847384839,1.93260853163297,0.818238361772504,1.43402297694502,0,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,1.38134921352481,0,0.721879481669586,1.18306800039844,0.337169380156203,0.723033089650446,0.220587945464788,0.217879444092406,0,0.674156540800822,0.784885860501384,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.368965315629341,0.686271241194102,1.20725313949488,0,0.904760751704678,0.277765335475589,0.651616610620649,1.03993478527958,0,0,0.117408694235822,2.7429625074604,2.31492756288305,1.52203321787679,0,0,0,1.63802985597466,0.891786973732369,0.93733833986777,0.671928512795438,1.41775097242386,0.268675568108545,0.290633938513962,0.766765358330422,0,0.616339038092582,0.621984346622316,0.576479813667846,0,0,0,0,0,0.102827492703324,0,0,4.14885012077835,0,1.98013371716565,0.129271715757778,3.57656445851882,1.690605505112,0.26593811658487,1.04007436911366,1.28603687131071,0,2.39779961114489,0.285955987316295,0,0,0.65147236858747,0,0,0,0,0.099972991182057,1.2162378064119,1.50677127429638,0,1.19812427745791,0,0,2.02693829334611,0.205476322550383,1.07436577943937,0,0.591092280605782,0,0.256686072559497,0,2.60279707715243,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0.542530047399471,0.415941723061614,1.24900292158013,0.315404830067869,0.468565659970853,0.601892199455438,0,0,0,0.737476674166813,0.868836144680828,3.32861967686659,0.686286847621712,0,1.50999940573032,4.16237475433433,0,0,0.30239029332968,0.992431231275107,0.306923946576125,0.561320188866147,1.02511319404561,1.02341449813341,0.804269605718038,0,0.462629081407967,0.177561725313127,0.821271560138091,0,0.581051892299796,0.362578348774867,0.40101294060657,0.460404944679482,0,0.364182336013434,0,3.60959690325929,1.00119938235739,0.784349769176855,0,0.73886140225013,0,3.2317804002538,0.431831832204279,0,0.812839312631559,2.00675909541941,5.3524017339458,2.49322802678617,2.0148727924996,0,0,0,0,0,0.309123034943167,0.824125183365091,0.41254749960294,0,0.650060246036521,0,0.290012154876366,0.308097234229289,0,0.964856007391714,0.214840489736547,0.145016693914229,0.426133137080504,0,0.495854746082934,1.53752053892085,0.638063562472921,0.809262246844399,1.85938219718914,0.94443704049192,0,0.308033580176089,1.06461206063404,0.869932992075073,1.48259375283136,0.715624433709956,1.116475108079,1.58189712359363,0.38126038784765,2.303080121802,0,0.636406495851874,1.56989728039846,0.359744915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| |||
|short_description=p4@MGLL | |||
}} |
Revision as of 21:22, 12 September 2013
Short description: | p4@MGLL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MGLL_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 153bp_to_ENST00000265052, NM_007283, uc003ejw.2, uc011bko.1_5end |
EntrezGene: | MGLL |
HGNC: | 17038 |
UniProt: | Q99685B3KRC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.55e-18 | 24 |
endothelial cell | 7.29e-16 | 36 |
blood vessel endothelial cell | 6.36e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.36e-15 | 18 |
meso-epithelial cell | 2.24e-14 | 45 |
endothelial cell of artery | 9.57e-11 | 9 |
lining cell | 3.84e-09 | 58 |
barrier cell | 3.84e-09 | 58 |
aortic endothelial cell | 1.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.36e-15 | 18 |
endothelium | 6.36e-15 | 18 |
cardiovascular system endothelium | 6.36e-15 | 18 |
simple squamous epithelium | 1.07e-12 | 22 |
endothelial tube | 9.57e-11 | 9 |
arterial system endothelium | 9.57e-11 | 9 |
endothelium of artery | 9.57e-11 | 9 |
squamous epithelium | 2.00e-10 | 25 |
vessel | 1.45e-09 | 68 |
lateral plate mesoderm | 2.66e-09 | 203 |
circulatory system | 2.77e-09 | 112 |
cardiovascular system | 8.90e-09 | 109 |
tube | 1.76e-08 | 192 |
vasculature | 3.83e-08 | 78 |
vascular system | 3.83e-08 | 78 |
anatomical conduit | 4.56e-08 | 240 |
neocortex | 7.68e-08 | 20 |
regional part of cerebral cortex | 9.43e-08 | 22 |
hemolymphoid system | 9.83e-08 | 108 |
epithelial tube open at both ends | 3.53e-07 | 59 |
blood vessel | 3.53e-07 | 59 |
blood vasculature | 3.53e-07 | 59 |
vascular cord | 3.53e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.