FFCP PHASE1:Hg19::chr3:149535068..149535093,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11342|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10057|TSSclassifier=S|UniProt=C9J8T4|association_with_transcript=39bp_to_ENST00000466795_5end|coexpression_cluster_id=C0|description=CAGE_peak_4_at_RNF13_5end|id=chr3:149535068..149535093,+|ontology_enrichment_celltype=CL:0000766!1.15e-95!76;CL:0002009!4.13e-87!65;CL:0002057!4.54e-87!42;CL:0002194!5.23e-87!63;CL:0000576!5.23e-87!63;CL:0000040!5.23e-87!63;CL:0000559!5.23e-87!63;CL:0000860!2.38e-80!45;CL:0000557!1.81e-78!71;CL:0000839!8.16e-77!70;CL:0000763!1.42e-61!112;CL:0000049!1.42e-61!112;CL:0000738!3.78e-51!140;CL:0002087!3.46e-44!119;CL:0002031!2.76e-38!124;CL:0000037!2.83e-38!172;CL:0000566!2.83e-38!172;CL:0002032!3.43e-36!165;CL:0000837!3.43e-36!165;CL:0000988!3.49e-35!182;CL:0002393!3.67e-17!9;CL:0002397!3.67e-17!9;CL:0000094!4.46e-17!8;CL:0000081!5.82e-12!11;CL:0000134!3.74e-11!358;CL:0002320!1.29e-10!365;CL:0000219!9.45e-09!390;CL:0000775!1.53e-07!3;CL:0000235!2.84e-07!10;CL:0000767!2.92e-07!3;CL:0000875!9.82e-07!3;CL:0002396!9.82e-07!3|ontology_enrichment_celltype_v019=CL:0000860;6.67e-99;33!CL:0002057;6.67e-99;33!CL:0000473;1.54e-92;39!CL:0000234;1.54e-92;39!CL:0000576;7.64e-64;48!CL:0000766;5.95e-54;69!CL:0000094;9.96e-29;8!CL:0000763;2.50e-27;100!CL:0000081;1.51e-20;11!CL:0000738;5.78e-16;136!CL:0000235;3.34e-15;6!CL:0002087;8.58e-14;104!CL:0000775;5.23e-12;3!CL:0000767;1.50e-11;3!CL:0002393;9.61e-10;6!CL:0002397;9.61e-10;6!CL:0000988;1.17e-08;177!CL:0000771;1.23e-08;2!CL:0000219;5.94e-08;193|ontology_enrichment_celltype_v019_2=CL:0000766,1.48e-133,72;CL:0000473,5.48e-128,48;CL:0000234,5.48e-128,48;CL:0002194,3.40e-116,59;CL:0000576,3.40e-116,59;CL:0000040,3.40e-116,59;CL:0000559,3.40e-116,59;CL:0000860,2.02e-113,42;CL:0002057,2.02e-113,42;CL:0002009,3.87e-112,61;CL:0000839,4.70e-103,66;CL:0000557,2.13e-101,67;CL:0000763,3.77e-86,108;CL:0000049,3.77e-86,108;CL:0000738,1.74e-66,136;CL:0002087,1.91e-55,115;CL:0002032,1.16e-54,161;CL:0000837,1.16e-54,161;CL:0002031,9.40e-53,120;CL:0000037,5.60e-52,168;CL:0000988,7.77e-49,177;CL:0000094,8.74e-29,8;CL:0000081,1.38e-20,11;CL:0000134,2.46e-19,354;CL:0002320,9.30e-19,361;CL:0000219,1.00e-16,386;CL:0000235,3.55e-15,6;CL:0000048,3.07e-14,427;CL:0000723,6.77e-14,433;CL:0000034,1.88e-13,441;CL:0000775,4.75e-12,3;CL:0000767,1.47e-11,3;CL:0002393,1.19e-09,9;CL:0002397,1.19e-09,9;CL:0000771,1.21e-08,2|ontology_enrichment_development_v019=CL:0002057;2.42e-83;42!CL:0000049;4.02e-25;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.49e-68!80;UBERON:0002390!8.25e-66!102;UBERON:0003061!8.25e-66!102;UBERON:0001474!4.28e-62!86;UBERON:0002193!1.48e-60!112;UBERON:0004765!1.47e-50!101;UBERON:0001434!1.47e-50!101;UBERON:0002405!2.61e-44!115;UBERON:0002204!1.83e-24!167;UBERON:0003081!4.78e-23!216;UBERON:0002384!1.97e-10!375;UBERON:0000926!1.73e-07!448;UBERON:0004120!1.73e-07!448;UBERON:0006603!1.73e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.01e-88,76;UBERON:0001474,2.46e-81,82;UBERON:0004765,2.45e-73,90;UBERON:0002405,1.09e-70,93;UBERON:0002390,5.75e-70,98;UBERON:0003061,5.75e-70,98;UBERON:0001434,4.05e-65,100;UBERON:0002193,1.19e-62,108;UBERON:0002204,2.86e-35,167;UBERON:0003081,6.79e-29,203;UBERON:0002384,5.69e-18,371;UBERON:0000926,3.88e-15,315;UBERON:0004120,3.88e-15,315;UBERON:0006603,3.88e-15,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.53531759238885,2.01260960310899,0,0,0,0,0,0,0.553995408531877,0.401088894940283,1.08505435357926,0.223915474239924,0.647787332037959,0,5.23433659606433,4.1566353805769,1.4555043671269,15.8051745095866,23.0254017292222,27.5638670096642,41.4277044943897,33.5570525553122,39.9654968511709,49.9881237068097,47.1203819016193,33.8566216485854,9.60035931667284,19.6492428041649,13.9328560355952,29.0779697752357,34.0184768700659,28.1308335351578,6.59702600373432,13.3640650606493,6.39337125799041,23.5069483289153,25.5323351111013,16.8162007228805,43.7172677546733,34.9393555341535,51.2565673504075,8.47559303686716,33.1449872388808,28.4816148696796,2.11255286311942,1.06302149982522,1.67726916406701,0.898629049171961,1.35159203557356,0.964353520182481,0.570025487482497,0.59675003159727,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472843619281,1.91542711029194,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,9.12616634043027,1.33768046059855,0,0,0,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.432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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11342 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10057 | |||
|TSSclassifier=S | |||
|UniProt=C9J8T4 | |||
|association_with_transcript=39bp_to_ENST00000466795_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_RNF13_5end | |||
|id=chr3:149535068..149535093,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.15e-95!76;CL:0002009!4.13e-87!65;CL:0002057!4.54e-87!42;CL:0002194!5.23e-87!63;CL:0000576!5.23e-87!63;CL:0000040!5.23e-87!63;CL:0000559!5.23e-87!63;CL:0000860!2.38e-80!45;CL:0000557!1.81e-78!71;CL:0000839!8.16e-77!70;CL:0000763!1.42e-61!112;CL:0000049!1.42e-61!112;CL:0000738!3.78e-51!140;CL:0002087!3.46e-44!119;CL:0002031!2.76e-38!124;CL:0000037!2.83e-38!172;CL:0000566!2.83e-38!172;CL:0002032!3.43e-36!165;CL:0000837!3.43e-36!165;CL:0000988!3.49e-35!182;CL:0002393!3.67e-17!9;CL:0002397!3.67e-17!9;CL:0000094!4.46e-17!8;CL:0000081!5.82e-12!11;CL:0000134!3.74e-11!358;CL:0002320!1.29e-10!365;CL:0000219!9.45e-09!390;CL:0000775!1.53e-07!3;CL:0000235!2.84e-07!10;CL:0000767!2.92e-07!3;CL:0000875!9.82e-07!3;CL:0002396!9.82e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.67e-99;33!CL:0002057;6.67e-99;33!CL:0000473;1.54e-92;39!CL:0000234;1.54e-92;39!CL:0000576;7.64e-64;48!CL:0000766;5.95e-54;69!CL:0000094;9.96e-29;8!CL:0000763;2.50e-27;100!CL:0000081;1.51e-20;11!CL:0000738;5.78e-16;136!CL:0000235;3.34e-15;6!CL:0002087;8.58e-14;104!CL:0000775;5.23e-12;3!CL:0000767;1.50e-11;3!CL:0002393;9.61e-10;6!CL:0002397;9.61e-10;6!CL:0000988;1.17e-08;177!CL:0000771;1.23e-08;2!CL:0000219;5.94e-08;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.48e-133,72;CL:0000473,5.48e-128,48;CL:0000234,5.48e-128,48;CL:0002194,3.40e-116,59;CL:0000576,3.40e-116,59;CL:0000040,3.40e-116,59;CL:0000559,3.40e-116,59;CL:0000860,2.02e-113,42;CL:0002057,2.02e-113,42;CL:0002009,3.87e-112,61;CL:0000839,4.70e-103,66;CL:0000557,2.13e-101,67;CL:0000763,3.77e-86,108;CL:0000049,3.77e-86,108;CL:0000738,1.74e-66,136;CL:0002087,1.91e-55,115;CL:0002032,1.16e-54,161;CL:0000837,1.16e-54,161;CL:0002031,9.40e-53,120;CL:0000037,5.60e-52,168;CL:0000988,7.77e-49,177;CL:0000094,8.74e-29,8;CL:0000081,1.38e-20,11;CL:0000134,2.46e-19,354;CL:0002320,9.30e-19,361;CL:0000219,1.00e-16,386;CL:0000235,3.55e-15,6;CL:0000048,3.07e-14,427;CL:0000723,6.77e-14,433;CL:0000034,1.88e-13,441;CL:0000775,4.75e-12,3;CL:0000767,1.47e-11,3;CL:0002393,1.19e-09,9;CL:0002397,1.19e-09,9;CL:0000771,1.21e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-83;42!CL:0000049;4.02e-25;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.49e-68!80;UBERON:0002390!8.25e-66!102;UBERON:0003061!8.25e-66!102;UBERON:0001474!4.28e-62!86;UBERON:0002193!1.48e-60!112;UBERON:0004765!1.47e-50!101;UBERON:0001434!1.47e-50!101;UBERON:0002405!2.61e-44!115;UBERON:0002204!1.83e-24!167;UBERON:0003081!4.78e-23!216;UBERON:0002384!1.97e-10!375;UBERON:0000926!1.73e-07!448;UBERON:0004120!1.73e-07!448;UBERON:0006603!1.73e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.01e-88,76;UBERON:0001474,2.46e-81,82;UBERON:0004765,2.45e-73,90;UBERON:0002405,1.09e-70,93;UBERON:0002390,5.75e-70,98;UBERON:0003061,5.75e-70,98;UBERON:0001434,4.05e-65,100;UBERON:0002193,1.19e-62,108;UBERON:0002204,2.86e-35,167;UBERON:0003081,6.79e-29,203;UBERON:0002384,5.69e-18,371;UBERON:0000926,3.88e-15,315;UBERON:0004120,3.88e-15,315;UBERON:0006603,3.88e-15,315 | |||
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|short_description=p4@RNF13 | |||
}} |
Revision as of 22:05, 12 September 2013
Short description: | p4@RNF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RNF13_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 39bp_to_ENST00000466795_5end |
EntrezGene: | RNF13 |
HGNC: | 10057 |
UniProt: | C9J8T4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.01e-88 | 76 |
bone element | 2.46e-81 | 82 |
skeletal element | 2.45e-73 | 90 |
immune system | 1.09e-70 | 93 |
hematopoietic system | 5.75e-70 | 98 |
blood island | 5.75e-70 | 98 |
skeletal system | 4.05e-65 | 100 |
hemolymphoid system | 1.19e-62 | 108 |
musculoskeletal system | 2.86e-35 | 167 |
lateral plate mesoderm | 6.79e-29 | 203 |
connective tissue | 5.69e-18 | 371 |
mesoderm | 3.88e-15 | 315 |
mesoderm-derived structure | 3.88e-15 | 315 |
presumptive mesoderm | 3.88e-15 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.