FFCP PHASE1:Hg19::chr3:151923200..151923235,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C498|description=CAGE_peak_at_chr3:151923200..151923235,-|id=chr3:151923200..151923235,-|ontology_enrichment_celltype=CL:0000037!1.30e-80!172;CL:0000566!1.30e-80!172;CL:0002032!3.15e-76!165;CL:0000837!3.15e-76!165;CL:0000988!2.30e-73!182;CL:0000738!1.52e-68!140;CL:0000763!1.60e-54!112;CL:0000049!1.60e-54!112;CL:0002031!1.56e-53!124;CL:0002087!2.29e-51!119;CL:0000766!7.05e-41!76;CL:0000557!1.76e-34!71;CL:0000839!2.63e-33!70;CL:0002009!5.66e-32!65;CL:0002194!2.62e-30!63;CL:0000576!2.62e-30!63;CL:0000040!2.62e-30!63;CL:0000559!2.62e-30!63;CL:0002057!1.19e-24!42;CL:0000860!5.02e-22!45;CL:0000542!6.98e-18!53;CL:0000051!6.98e-18!53;CL:0000838!2.69e-17!52;CL:0000134!4.89e-15!358;CL:0002320!5.44e-14!365;CL:0000236!1.92e-12!14;CL:0000945!1.23e-10!24;CL:0000826!1.23e-10!24;CL:0000219!1.95e-10!390;CL:0000791!2.58e-10!18;CL:0000789!2.58e-10!18;CL:0002420!2.58e-10!18;CL:0002419!2.58e-10!18;CL:0000790!2.58e-10!18;CL:0000451!2.74e-10!10;CL:0002393!3.97e-09!9;CL:0002397!3.97e-09!9;CL:0000990!4.38e-09!8;CL:0000094!7.99e-09!8;CL:0000084!8.04e-07!25;CL:0000827!8.04e-07!25;CL:0000048!8.56e-07!430|ontology_enrichment_celltype_v019=CL:0000236;7.41e-17;13!CL:0000766;1.40e-14;69!CL:0000451;1.53e-13;10!CL:0000094;1.73e-13;8!CL:0000738;2.16e-13;136!CL:0000763;5.06e-13;100!CL:0000576;4.34e-12;48!CL:0002087;1.50e-11;104!CL:0000990;2.11e-11;8!CL:0000791;2.48e-10;18!CL:0000789;2.48e-10;18!CL:0002419;2.48e-10;18!CL:0000988;3.75e-10;177!CL:0002393;4.16e-10;6!CL:0002397;4.16e-10;6!CL:0000453;1.67e-09;5!CL:0000081;2.53e-09;11!CL:0000624;6.34e-09;6!CL:0000542;1.22e-08;53!CL:0000945;1.05e-07;24!CL:0000219;3.32e-07;193!CL:0000775;4.93e-07;3|ontology_enrichment_celltype_v019_2=CL:0000037,2.35e-64,168;CL:0000988,9.18e-60,177;CL:0002032,1.25e-59,161;CL:0000837,1.25e-59,161;CL:0000738,2.04e-59,136;CL:0000763,1.52e-43,108;CL:0000049,1.52e-43,108;CL:0002031,7.59e-40,120;CL:0002087,1.04e-37,115;CL:0000766,2.90e-35,72;CL:0000557,4.18e-27,67;CL:0000839,2.49e-24,66;CL:0002009,2.53e-24,61;CL:0002194,3.96e-22,59;CL:0000576,3.96e-22,59;CL:0000040,3.96e-22,59;CL:0000559,3.96e-22,59;CL:0000134,3.11e-17,354;CL:0002320,1.97e-16,361;CL:0000473,3.56e-16,48;CL:0000234,3.56e-16,48;CL:0000236,1.92e-15,14;CL:0000860,4.72e-15,42;CL:0002057,4.72e-15,42;CL:0002393,4.16e-14,9;CL:0002397,4.16e-14,9;CL:0000542,7.76e-14,53;CL:0000051,7.76e-14,53;CL:0000451,1.22e-13,10;CL:0000219,1.24e-13,386;CL:0000094,1.32e-13,8;CL:0000838,4.47e-13,52;CL:0000990,1.33e-11,8;CL:0000791,1.41e-10,18;CL:0000789,1.41e-10,18;CL:0002420,1.41e-10,18;CL:0002419,1.41e-10,18;CL:0000790,1.41e-10,18;CL:0000048,2.75e-10,427;CL:0000034,3.45e-10,441;CL:0000723,7.80e-10,433;CL:0000453,1.76e-09,5;CL:0000081,2.10e-09,11;CL:0000624,4.31e-09,6;CL:0000945,1.01e-07,24;CL:0000826,1.01e-07,24;CL:0000775,5.01e-07,3;CL:0000084,8.03e-07,25;CL:0000827,8.03e-07,25;CL:0000840,8.68e-07,5;CL:0001029,8.68e-07,5|ontology_enrichment_development_v019=CL:0002057;4.78e-11;42!CL:0000049;2.37e-10;108!CL:0000790;2.48e-10;18!CL:0000051;1.22e-08;53|ontology_enrichment_disease=DOID:8692!3.00e-12!31;DOID:1240!1.33e-10!39;DOID:2531!2.06e-09!51;DOID:0060083!2.06e-09!51|ontology_enrichment_disease_v019=DOID:8692;1.05e-07;31|ontology_enrichment_disease_v019_2=DOID:8692,3.55e-08,31|ontology_enrichment_uberon=UBERON:0002390!7.84e-41!102;UBERON:0003061!7.84e-41!102;UBERON:0002193!5.53e-37!112;UBERON:0002371!1.43e-30!80;UBERON:0001474!7.62e-27!86;UBERON:0002405!1.14e-21!115;UBERON:0004765!3.15e-21!101;UBERON:0001434!3.15e-21!101;UBERON:0002384!5.27e-13!375;UBERON:0007023!6.04e-10!115;UBERON:0003081!1.59e-09!216;UBERON:0000178!2.16e-07!15;UBERON:0000179!2.16e-07!15;UBERON:0000463!2.16e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;8.18e-11;15!UBERON:0000179;8.18e-11;15!UBERON:0000463;8.18e-11;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.67e-31,98;UBERON:0003061,3.67e-31,98;UBERON:0002193,3.69e-28,108;UBERON:0002371,5.36e-24,76;UBERON:0001474,2.25e-21,82;UBERON:0002405,9.96e-20,93;UBERON:0004765,1.95e-18,90;UBERON:0001434,1.87e-15,100;UBERON:0002384,2.41e-15,371;UBERON:0000178,1.15e-10,15;UBERON:0000179,1.15e-10,15;UBERON:0000463,1.15e-10,15;UBERON:0003081,7.12e-09,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.236132343941038,1.96682138424452,1.53531759238885,1.39334510984468,0,0,0,0.0774672005803016,0,2.64240395401362,2.21598163412751,2.20598892217156,2.60413044859022,1.79132379391939,1.29557466407592,0.77272670290256,3.19876125315042,1.13362783106643,4.12392904019288,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,1.0246428261164,0.709446689665756,0.344745680736619,2.5819387343353,1.35426486594342,0.941211697713023,0.272906150057846,0.898893937780338,0.306083892370903,1.28371610830437,1.27867425159808,1.64925650093358,0.797854630486527,0.42622475053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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C498 | |||
|description=CAGE_peak_at_chr3:151923200..151923235,- | |||
|id=chr3:151923200..151923235,- | |||
|ontology_enrichment_celltype=CL:0000037!1.30e-80!172;CL:0000566!1.30e-80!172;CL:0002032!3.15e-76!165;CL:0000837!3.15e-76!165;CL:0000988!2.30e-73!182;CL:0000738!1.52e-68!140;CL:0000763!1.60e-54!112;CL:0000049!1.60e-54!112;CL:0002031!1.56e-53!124;CL:0002087!2.29e-51!119;CL:0000766!7.05e-41!76;CL:0000557!1.76e-34!71;CL:0000839!2.63e-33!70;CL:0002009!5.66e-32!65;CL:0002194!2.62e-30!63;CL:0000576!2.62e-30!63;CL:0000040!2.62e-30!63;CL:0000559!2.62e-30!63;CL:0002057!1.19e-24!42;CL:0000860!5.02e-22!45;CL:0000542!6.98e-18!53;CL:0000051!6.98e-18!53;CL:0000838!2.69e-17!52;CL:0000134!4.89e-15!358;CL:0002320!5.44e-14!365;CL:0000236!1.92e-12!14;CL:0000945!1.23e-10!24;CL:0000826!1.23e-10!24;CL:0000219!1.95e-10!390;CL:0000791!2.58e-10!18;CL:0000789!2.58e-10!18;CL:0002420!2.58e-10!18;CL:0002419!2.58e-10!18;CL:0000790!2.58e-10!18;CL:0000451!2.74e-10!10;CL:0002393!3.97e-09!9;CL:0002397!3.97e-09!9;CL:0000990!4.38e-09!8;CL:0000094!7.99e-09!8;CL:0000084!8.04e-07!25;CL:0000827!8.04e-07!25;CL:0000048!8.56e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.41e-17;13!CL:0000766;1.40e-14;69!CL:0000451;1.53e-13;10!CL:0000094;1.73e-13;8!CL:0000738;2.16e-13;136!CL:0000763;5.06e-13;100!CL:0000576;4.34e-12;48!CL:0002087;1.50e-11;104!CL:0000990;2.11e-11;8!CL:0000791;2.48e-10;18!CL:0000789;2.48e-10;18!CL:0002419;2.48e-10;18!CL:0000988;3.75e-10;177!CL:0002393;4.16e-10;6!CL:0002397;4.16e-10;6!CL:0000453;1.67e-09;5!CL:0000081;2.53e-09;11!CL:0000624;6.34e-09;6!CL:0000542;1.22e-08;53!CL:0000945;1.05e-07;24!CL:0000219;3.32e-07;193!CL:0000775;4.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.35e-64,168;CL:0000988,9.18e-60,177;CL:0002032,1.25e-59,161;CL:0000837,1.25e-59,161;CL:0000738,2.04e-59,136;CL:0000763,1.52e-43,108;CL:0000049,1.52e-43,108;CL:0002031,7.59e-40,120;CL:0002087,1.04e-37,115;CL:0000766,2.90e-35,72;CL:0000557,4.18e-27,67;CL:0000839,2.49e-24,66;CL:0002009,2.53e-24,61;CL:0002194,3.96e-22,59;CL:0000576,3.96e-22,59;CL:0000040,3.96e-22,59;CL:0000559,3.96e-22,59;CL:0000134,3.11e-17,354;CL:0002320,1.97e-16,361;CL:0000473,3.56e-16,48;CL:0000234,3.56e-16,48;CL:0000236,1.92e-15,14;CL:0000860,4.72e-15,42;CL:0002057,4.72e-15,42;CL:0002393,4.16e-14,9;CL:0002397,4.16e-14,9;CL:0000542,7.76e-14,53;CL:0000051,7.76e-14,53;CL:0000451,1.22e-13,10;CL:0000219,1.24e-13,386;CL:0000094,1.32e-13,8;CL:0000838,4.47e-13,52;CL:0000990,1.33e-11,8;CL:0000791,1.41e-10,18;CL:0000789,1.41e-10,18;CL:0002420,1.41e-10,18;CL:0002419,1.41e-10,18;CL:0000790,1.41e-10,18;CL:0000048,2.75e-10,427;CL:0000034,3.45e-10,441;CL:0000723,7.80e-10,433;CL:0000453,1.76e-09,5;CL:0000081,2.10e-09,11;CL:0000624,4.31e-09,6;CL:0000945,1.01e-07,24;CL:0000826,1.01e-07,24;CL:0000775,5.01e-07,3;CL:0000084,8.03e-07,25;CL:0000827,8.03e-07,25;CL:0000840,8.68e-07,5;CL:0001029,8.68e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.78e-11;42!CL:0000049;2.37e-10;108!CL:0000790;2.48e-10;18!CL:0000051;1.22e-08;53 | |||
|ontology_enrichment_disease=DOID:8692!3.00e-12!31;DOID:1240!1.33e-10!39;DOID:2531!2.06e-09!51;DOID:0060083!2.06e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.05e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.55e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.84e-41!102;UBERON:0003061!7.84e-41!102;UBERON:0002193!5.53e-37!112;UBERON:0002371!1.43e-30!80;UBERON:0001474!7.62e-27!86;UBERON:0002405!1.14e-21!115;UBERON:0004765!3.15e-21!101;UBERON:0001434!3.15e-21!101;UBERON:0002384!5.27e-13!375;UBERON:0007023!6.04e-10!115;UBERON:0003081!1.59e-09!216;UBERON:0000178!2.16e-07!15;UBERON:0000179!2.16e-07!15;UBERON:0000463!2.16e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.18e-11;15!UBERON:0000179;8.18e-11;15!UBERON:0000463;8.18e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.67e-31,98;UBERON:0003061,3.67e-31,98;UBERON:0002193,3.69e-28,108;UBERON:0002371,5.36e-24,76;UBERON:0001474,2.25e-21,82;UBERON:0002405,9.96e-20,93;UBERON:0004765,1.95e-18,90;UBERON:0001434,1.87e-15,100;UBERON:0002384,2.41e-15,371;UBERON:0000178,1.15e-10,15;UBERON:0000179,1.15e-10,15;UBERON:0000463,1.15e-10,15;UBERON:0003081,7.12e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.236132343941038,1.96682138424452,1.53531759238885,1.39334510984468,0,0,0,0.0774672005803016,0,2.64240395401362,2.21598163412751,2.20598892217156,2.60413044859022,1.79132379391939,1.29557466407592,0.77272670290256,3.19876125315042,1.13362783106643,4.12392904019288,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,1.0246428261164,0.709446689665756,0.344745680736619,2.5819387343353,1.35426486594342,0.941211697713023,0.272906150057846,0.898893937780338,0.306083892370903,1.28371610830437,1.27867425159808,1.64925650093358,0.797854630486527,0.426224750532694,0.870627715885752,0.56738522469114,0.622822248995575,0,0,1.3031330682307,0.605399502633369,2.20966581592539,1.58231193720442,3.59133986730301,4.03948169933583,3.35453832813401,1.12328631146495,2.10247649978109,5.14321877430656,1.71007646244749,3.58050018958362,2.73996230646951,12.3197371122926,10.3766336139805,12.4531295540898,8.53460445133014,14.4142555332964,13.2193061189531,17.8482115651913,16.2189138271012,6.83055562931338,4.69789751496751,4.96955196562797,0,1.68152568894461,1.58030450865046,2.360517241366,3.14408610199332,2.87842098599313,7.18901930179916,1.95553359980154,2.36723902867367,0,4.79064964606246,1.17842362989935,2.21533894583621,4.33286182024025,2.43373507478783,4.68213651215562,0.986627427622057,2.48715016007264,3.47763702882063,2.96573126324121,3.47803076516627,3.1360657141493,2.60611488204402,1.91610246800961,2.06176467289578,2.02415753615602,3.82278497188916,0,0.950452044448374,1.95747654801105,3.32765189001488,2.49861453104692,3.31488152861624,2.46338399076314,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.9472843619281,1.91542711029194,0.797747763113191,3.57735936458013,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.468008530278475,0.445893486866185,0,0,0,0,0,0,1.47798971368783,2.20121085033065,1.65862492432618,1.72943944100354,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.224170287987055,0.394061520403854,0.862510299438069,1.02674429023799,0,0,0,0,0,17.9761685747324,20.9413021442817,12.018049889645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,3.01999881146064,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,4.05958087385735,3.0585488285695,8.54470780761244,8.81457569193819,10.2840568271549,6.48473311192717,5.40031437238115,8.72437693923697,0,0,0,1.30062222588003,0,0,0,1.59663497146253,2.68107518185313,2.32840940996271,0,1.96558024679421,0.228234679033192,0.156679895773023,0,0.677167111206413,0.642352300414798,1.00899853595524,5.53600108997424,1.71752672377882,3.99412993600995,2.46043718681657,3.17013369252626,3.71237381263877,0.278406173895242,0,2.16364542780786,0.99921590399346,1.4098700508785,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,2.39097585901284,3.03912307084262,0,0,0.615424027305347,0,0,0,7.1620131831762,0.986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,1.46205491157214,0,0,0,0,0,0,0,0,0.941881538370149,1.82832850090172,0.451191321234361,0,0.167821586975843,0,0.953619473882272,0,0,0,0,0,0.442287822516696,0,0,0,0,0.202203398942031,0,0,0.729819156862664,0,0,0.394584402849391,0,0,0.821425535170343,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.916641696046735,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,3.37460837327251,2.32140586367385,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,1.06787412567695,0.314408610199332,1.24271716604159,1.9846640872478,0,0.365377795142688,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.01497111821798,5.84605297378798,14.0666239060026,0.327609848846413,0,0,0,0.426766918776564,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0.576169937778896,0,0.40781839786099,0.0657727735628491,0,0,0.549451649953598,0,0,0,0,0,0.142953088353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| |||
|short_description=p@chr3:151923200..151923235,- | |||
}} |
Revision as of 22:10, 12 September 2013
Short description: | p@chr3:151923200..151923235, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:151923200..151923235, - |
Coexpression cluster: | C498_Eosinophils_Neutrophils_CD19_Burkitt_diffuse_lymphoma_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.67e-31 | 98 |
blood island | 3.67e-31 | 98 |
hemolymphoid system | 3.69e-28 | 108 |
bone marrow | 5.36e-24 | 76 |
bone element | 2.25e-21 | 82 |
immune system | 9.96e-20 | 93 |
skeletal element | 1.95e-18 | 90 |
skeletal system | 1.87e-15 | 100 |
connective tissue | 2.41e-15 | 371 |
blood | 1.15e-10 | 15 |
haemolymphatic fluid | 1.15e-10 | 15 |
organism substance | 1.15e-10 | 15 |
lateral plate mesoderm | 7.12e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.55e-08 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.