FFCP PHASE1:Mm9::chr13:25034559..25034580,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14756|HGNC=|MCL_coexpression_id=20|UniProt=Q8VCU2,Q8R432|association_with_transcript=-440bp_to_ENSMUST00000021773,NM_008156,uc007pws.1_5end|description=CAGE_peak_7_at_Gpld1_5end|id=chr13:25034559..25034580,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,7.63e-09,3;CL:0002610,1.28e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.18e-21!73;UBERON:0005743!7.18e-21!73;UBERON:0000073!7.50e-20!75;UBERON:0001016!7.50e-20!75;UBERON:0001049!1.18e-19!52;UBERON:0005068!1.18e-19!52;UBERON:0006241!1.18e-19!52;UBERON:0007135!1.18e-19!52;UBERON:0000955!2.16e-19!50;UBERON:0006238!2.16e-19!50;UBERON:0000033!3.03e-19!63;UBERON:0002616!1.51e-18!49;UBERON:0004121!4.82e-17!102;UBERON:0000924!4.82e-17!102;UBERON:0006601!4.82e-17!102;UBERON:0004111!8.03e-17!122;UBERON:0002346!6.47e-15!71;UBERON:0003075!6.47e-15!71;UBERON:0007284!6.47e-15!71;UBERON:0000025!9.37e-15!114;UBERON:0003080!1.68e-13!40;UBERON:0002780!1.20e-12!39;UBERON:0001890!1.20e-12!39;UBERON:0006240!1.20e-12!39;UBERON:0002020!1.91e-12!34;UBERON:0003056!4.36e-12!49;UBERON:0007811!3.35e-10!86;UBERON:0002021!6.46e-10!10;UBERON:0000411!6.46e-10!10;UBERON:0001950!6.46e-10!10;UBERON:0002791!9.06e-10!29;UBERON:0003528!9.06e-10!29;UBERON:0001893!9.06e-10!29;UBERON:0000477!3.42e-09!154;UBERON:0000153!3.26e-08!94;UBERON:0002298!7.73e-08!6;UBERON:0002619!8.36e-08!17;UBERON:0003076!4.43e-07!12;UBERON:0003057!4.43e-07!12;UBERON:0000956!8.87e-07!21;UBERON:0001869!8.87e-07!21;UBERON:0000203!8.87e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.59e-28,54;UBERON:0000955,1.61e-27,47;UBERON:0006238,1.61e-27,47;UBERON:0001017,1.87e-26,73;UBERON:0002616,8.06e-26,46;UBERON:0001016,1.44e-25,75;UBERON:0001049,1.76e-24,52;UBERON:0005068,1.76e-24,52;UBERON:0006241,1.76e-24,52;UBERON:0007135,1.76e-24,52;UBERON:0004121,2.62e-23,95;UBERON:0000924,2.62e-23,95;UBERON:0006601,2.62e-23,95;UBERON:0002346,3.14e-22,64;UBERON:0003075,3.14e-22,64;UBERON:0007284,3.14e-22,64;UBERON:0002021,5.38e-21,10;UBERON:0000411,5.38e-21,10;UBERON:0001950,5.38e-21,10;UBERON:0010371,2.30e-20,73;UBERON:0003080,6.38e-20,40;UBERON:0003056,7.03e-19,49;UBERON:0002780,3.27e-18,39;UBERON:0001890,3.27e-18,39;UBERON:0006240,3.27e-18,39;UBERON:0003528,1.01e-17,29;UBERON:0002791,1.01e-17,29;UBERON:0001893,1.01e-17,29;UBERON:0010314,7.66e-15,92;UBERON:0002020,1.43e-14,34;UBERON:0002619,3.76e-14,17;UBERON:0000956,2.16e-13,21;UBERON:0001869,2.16e-13,21;UBERON:0000203,2.16e-13,21;UBERON:0002950,3.50e-11,4;UBERON:0001891,3.50e-11,4;UBERON:0009616,3.50e-11,4;UBERON:0010286,3.50e-11,4;UBERON:0000025,8.80e-10,114;UBERON:0004111,1.20e-09,122;UBERON:0002038,7.63e-09,3;UBERON:0009663,7.63e-09,3;UBERON:0009661,7.63e-09,3;UBERON:0000125,7.63e-09,3;UBERON:0002308,7.63e-09,3;UBERON:0004684,1.28e-08,3;UBERON:0002275,1.28e-08,3;UBERON:0011216,1.00e-07,194;UBERON:0007023,1.82e-07,51;UBERON:0004733,2.60e-07,6;UBERON:0004732,2.60e-07,6;UBERON:0002028,2.60e-07,6;UBERON:0007277,2.60e-07,6|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,2.39680088414724,1.53687322128622,0,0,0,0.571301968807607,0.441737081903227,0,0,0,7.70811166995721,10.4703617229854,6.75868746327471,0.131886287730194,0.365950574409639,0,6.97957497503452,11.8180148106653,9.16789486660861,0.294628585473668,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0.448026887097336,0.421333260395256,0,0,0,1.97180787687353,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,7.02673912827713,5.86450779077674,0,0,0,0,7.78911324905078,8.6925114535539,0,6.77914848749878,6.13717097592793,8.72709787150152,7.30085683804909,0,0.124406970610093,0.252722758433675,1.47309299120532,0,0,0,0,0.136072998302656,0,0,1.81092359517311,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,3.78521907415429,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0.549122826376163,0,1.86070473834252,0,0.252578877947112,0.358794827043824,0,0,0,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,10.9174401191699,9.72856998715286,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0,0.517434735131018,0.214337035031592,0.354680467284547,0,0.493647061806363,0,0,0,0.661585194164886,0.16488625294148,0,0.120625849856312,0,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87345025498471,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0.724752362478018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0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| ||
|EntrezGene=14756 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=Q8VCU2,Q8R432 | |||
|association_with_transcript=-440bp_to_ENSMUST00000021773,NM_008156,uc007pws.1_5end | |||
|description=CAGE_peak_7_at_Gpld1_5end | |||
|id=chr13:25034559..25034580,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,7.63e-09,3;CL:0002610,1.28e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.18e-21!73;UBERON:0005743!7.18e-21!73;UBERON:0000073!7.50e-20!75;UBERON:0001016!7.50e-20!75;UBERON:0001049!1.18e-19!52;UBERON:0005068!1.18e-19!52;UBERON:0006241!1.18e-19!52;UBERON:0007135!1.18e-19!52;UBERON:0000955!2.16e-19!50;UBERON:0006238!2.16e-19!50;UBERON:0000033!3.03e-19!63;UBERON:0002616!1.51e-18!49;UBERON:0004121!4.82e-17!102;UBERON:0000924!4.82e-17!102;UBERON:0006601!4.82e-17!102;UBERON:0004111!8.03e-17!122;UBERON:0002346!6.47e-15!71;UBERON:0003075!6.47e-15!71;UBERON:0007284!6.47e-15!71;UBERON:0000025!9.37e-15!114;UBERON:0003080!1.68e-13!40;UBERON:0002780!1.20e-12!39;UBERON:0001890!1.20e-12!39;UBERON:0006240!1.20e-12!39;UBERON:0002020!1.91e-12!34;UBERON:0003056!4.36e-12!49;UBERON:0007811!3.35e-10!86;UBERON:0002021!6.46e-10!10;UBERON:0000411!6.46e-10!10;UBERON:0001950!6.46e-10!10;UBERON:0002791!9.06e-10!29;UBERON:0003528!9.06e-10!29;UBERON:0001893!9.06e-10!29;UBERON:0000477!3.42e-09!154;UBERON:0000153!3.26e-08!94;UBERON:0002298!7.73e-08!6;UBERON:0002619!8.36e-08!17;UBERON:0003076!4.43e-07!12;UBERON:0003057!4.43e-07!12;UBERON:0000956!8.87e-07!21;UBERON:0001869!8.87e-07!21;UBERON:0000203!8.87e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.59e-28,54;UBERON:0000955,1.61e-27,47;UBERON:0006238,1.61e-27,47;UBERON:0001017,1.87e-26,73;UBERON:0002616,8.06e-26,46;UBERON:0001016,1.44e-25,75;UBERON:0001049,1.76e-24,52;UBERON:0005068,1.76e-24,52;UBERON:0006241,1.76e-24,52;UBERON:0007135,1.76e-24,52;UBERON:0004121,2.62e-23,95;UBERON:0000924,2.62e-23,95;UBERON:0006601,2.62e-23,95;UBERON:0002346,3.14e-22,64;UBERON:0003075,3.14e-22,64;UBERON:0007284,3.14e-22,64;UBERON:0002021,5.38e-21,10;UBERON:0000411,5.38e-21,10;UBERON:0001950,5.38e-21,10;UBERON:0010371,2.30e-20,73;UBERON:0003080,6.38e-20,40;UBERON:0003056,7.03e-19,49;UBERON:0002780,3.27e-18,39;UBERON:0001890,3.27e-18,39;UBERON:0006240,3.27e-18,39;UBERON:0003528,1.01e-17,29;UBERON:0002791,1.01e-17,29;UBERON:0001893,1.01e-17,29;UBERON:0010314,7.66e-15,92;UBERON:0002020,1.43e-14,34;UBERON:0002619,3.76e-14,17;UBERON:0000956,2.16e-13,21;UBERON:0001869,2.16e-13,21;UBERON:0000203,2.16e-13,21;UBERON:0002950,3.50e-11,4;UBERON:0001891,3.50e-11,4;UBERON:0009616,3.50e-11,4;UBERON:0010286,3.50e-11,4;UBERON:0000025,8.80e-10,114;UBERON:0004111,1.20e-09,122;UBERON:0002038,7.63e-09,3;UBERON:0009663,7.63e-09,3;UBERON:0009661,7.63e-09,3;UBERON:0000125,7.63e-09,3;UBERON:0002308,7.63e-09,3;UBERON:0004684,1.28e-08,3;UBERON:0002275,1.28e-08,3;UBERON:0011216,1.00e-07,194;UBERON:0007023,1.82e-07,51;UBERON:0004733,2.60e-07,6;UBERON:0004732,2.60e-07,6;UBERON:0002028,2.60e-07,6;UBERON:0007277,2.60e-07,6 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,2.39680088414724,1.53687322128622,0,0,0,0.571301968807607,0.441737081903227,0,0,0,7.70811166995721,10.4703617229854,6.75868746327471,0.131886287730194,0.365950574409639,0,6.97957497503452,11.8180148106653,9.16789486660861,0.294628585473668,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0.448026887097336,0.421333260395256,0,0,0,1.97180787687353,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,7.02673912827713,5.86450779077674,0,0,0,0,7.78911324905078,8.6925114535539,0,6.77914848749878,6.13717097592793,8.72709787150152,7.30085683804909,0,0.124406970610093,0.252722758433675,1.47309299120532,0,0,0,0,0.136072998302656,0,0,1.81092359517311,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,3.78521907415429,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0.549122826376163,0,1.86070473834252,0,0.252578877947112,0.358794827043824,0,0,0,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,10.9174401191699,9.72856998715286,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0,0.517434735131018,0.214337035031592,0.354680467284547,0,0.493647061806363,0,0,0,0.661585194164886,0.16488625294148,0,0.120625849856312,0,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87345025498471,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0.724752362478018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0.187682475451182,0,0,0.501572104035363,5.0827665835536,1.38097570952153,1.71868654031819,3.26521046453006,4.11049511862385,1.5107877947794,5.40018000185445,3.15224842256954,1.81256963593682,2.07104124700728,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p7@Gpld1 | |||
}} |
Revision as of 00:14, 13 September 2013
Short description: | p7@Gpld1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gpld1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -440bp_to_ENSMUST00000021773, NM_008156, uc007pws.1_5end |
EntrezGene: | Gpld1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 7.63e-09 | 3 |
raphe nuclei neuron | 1.28e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.