FFCP PHASE1:Mm9::chr13:36826319..36826361,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68404|HGNC=|MCL_coexpression_id=2837|UniProt=Q8CFV4|association_with_transcript=0bp_to_ENSMUST00000037623,NM_153529,uc007qcm.1_5end|description=CAGE_peak_1_at_Nrn1_5end|id=chr13:36826319..36826361,-|ontology_enrichment_celltype=CL:0000117!1.88e-07!23;CL:0000337!1.88e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-07,23;CL:0000337,1.31e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.23e-11!34;UBERON:0001017!1.79e-11!73;UBERON:0005743!1.79e-11!73;UBERON:0000073!3.35e-11!75;UBERON:0001016!3.35e-11!75;UBERON:0001049!4.55e-11!52;UBERON:0005068!4.55e-11!52;UBERON:0006241!4.55e-11!52;UBERON:0007135!4.55e-11!52;UBERON:0002107!1.21e-10!22;UBERON:0007499!1.21e-10!22;UBERON:0006925!1.21e-10!22;UBERON:0009497!1.21e-10!22;UBERON:0000015!1.21e-10!22;UBERON:0002423!1.21e-10!22;UBERON:0006235!1.21e-10!22;UBERON:0008835!1.21e-10!22;UBERON:0003894!1.21e-10!22;UBERON:0004161!1.21e-10!22;UBERON:0008836!1.21e-10!22;UBERON:0009854!1.96e-10!23;UBERON:0009856!1.96e-10!23;UBERON:0000955!2.26e-10!50;UBERON:0006238!2.26e-10!50;UBERON:0002616!4.91e-10!49;UBERON:0002791!1.22e-09!29;UBERON:0003528!1.22e-09!29;UBERON:0001893!1.22e-09!29;UBERON:0000025!1.28e-09!114;UBERON:0004121!1.39e-09!102;UBERON:0000924!1.39e-09!102;UBERON:0006601!1.39e-09!102;UBERON:0000468!2.23e-09!333;UBERON:0004111!3.12e-09!122;UBERON:0002346!5.46e-09!71;UBERON:0003075!5.46e-09!71;UBERON:0007284!5.46e-09!71;UBERON:0000033!1.36e-08!63;UBERON:0002365!3.46e-08!25;UBERON:0002330!3.46e-08!25;UBERON:0000956!6.42e-08!21;UBERON:0001869!6.42e-08!21;UBERON:0000203!6.42e-08!21;UBERON:0003080!7.68e-08!40;UBERON:0002780!2.02e-07!39;UBERON:0001890!2.02e-07!39;UBERON:0006240!2.02e-07!39;UBERON:0003056!3.61e-07!49;UBERON:0002021!4.17e-07!10;UBERON:0000411!4.17e-07!10;UBERON:0001950!4.17e-07!10;UBERON:0002619!5.21e-07!17;UBERON:0000922!7.94e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.66e-12,34;UBERON:0000073,8.96e-12,54;UBERON:0001017,2.68e-11,73;UBERON:0001016,4.98e-11,75;UBERON:0002107,6.95e-11,22;UBERON:0007499,6.95e-11,22;UBERON:0006925,6.95e-11,22;UBERON:0009497,6.95e-11,22;UBERON:0000015,6.95e-11,22;UBERON:0002423,6.95e-11,22;UBERON:0006235,6.95e-11,22;UBERON:0008835,6.95e-11,22;UBERON:0003894,6.95e-11,22;UBERON:0004161,6.95e-11,22;UBERON:0008836,6.95e-11,22;UBERON:0001049,7.27e-11,52;UBERON:0005068,7.27e-11,52;UBERON:0006241,7.27e-11,52;UBERON:0007135,7.27e-11,52;UBERON:0009854,1.14e-10,23;UBERON:0009856,1.14e-10,23;UBERON:0003528,7.44e-10,29;UBERON:0002791,7.44e-10,29;UBERON:0001893,7.44e-10,29;UBERON:0004121,2.21e-09,95;UBERON:0000924,2.21e-09,95;UBERON:0006601,2.21e-09,95;UBERON:0002346,7.21e-09,64;UBERON:0003075,7.21e-09,64;UBERON:0007284,7.21e-09,64;UBERON:0000955,7.23e-09,47;UBERON:0006238,7.23e-09,47;UBERON:0000025,1.05e-08,114;UBERON:0002616,1.54e-08,46;UBERON:0002365,2.70e-08,25;UBERON:0002330,2.70e-08,25;UBERON:0004111,3.05e-08,122;UBERON:0010371,3.15e-08,73;UBERON:0000956,4.35e-08,21;UBERON:0001869,4.35e-08,21;UBERON:0000203,4.35e-08,21;UBERON:0003080,1.75e-07,40;UBERON:0002021,2.97e-07,10;UBERON:0000411,2.97e-07,10;UBERON:0001950,2.97e-07,10;UBERON:0002619,3.73e-07,17;UBERON:0002780,4.61e-07,39;UBERON:0001890,4.61e-07,39;UBERON:0006240,4.61e-07,39|phase1_expression=2.08193501236232,0,0,0,0,0.671517087647559,0.467225281191051,4.00282302668886,5.91312633037,1.87251621057595,8.90333434772626,1.91453181588807,1.19840510951844,0.174840804837995,0,0.404950534779652,0,0.315462165358238,0.274228867211478,0.42438965179803,16.4133549991565,0,0,0,0,0,0.430761996159075,0.215471232685889,0.380046838912748,1.00812051903972,0,0,0,0,5.77703239502549,14.7948834369058,11.0251452381679,0,0,0,0,0,0,1.51076181570693,1.31790010585369,1.28482726513177,0,8.50298109883741,25.9229695626677,7.38833616482277,1.53985063787899,0,0,2.17608642603403,0.336093799142464,0.514518872071894,0.286533439938757,1.03134418455488,37.6308617198852,39.6743234454025,22.8179305262225,1.0165335962074,0,7.19919773825119,1.97773272513395,5.6838409195688,4.49400165777607,5.76327457982332,20.9453016863125,19.1708432431001,18.5085965989216,66.84233035049,63.3892712531131,7.34944795289724,8.33855597858656,8.27296907949019,36.3382407297983,125.77202801391,103.377196881452,28.4874381497219,36.0461315793494,30.7338888628488,59.4659787872941,41.6444331423443,37.4355707053185,72.4786320265222,73.7485306539353,27.2143190904939,1.74170244666323,7.3304413303582,4.34796733052517,79.1589966822876,276.068361485347,279.026550076751,224.172864019446,169.80219020989,43.5377702408431,0,0,0,2.39433813620357,0,0,0,0,0,0,74.219521817389,4.14300613835475,4.60170631100957,3.12273588179045,9.43842982767638,8.99400439298628,8.74191315205211,4.8211369925639,3.14166478324189,3.95511948374998,5.20557684911682,0.884610551949874,3.07357014900077,1.10420759230197,0.969750506270444,7.45567044872489,59.1417209963325,67.0229461803056,1.53274233125155,0,0,0,93.3195683492045,22.4175295381127,2.01046963380583,155.572766572087,187.1837147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| ||
|EntrezGene=68404 | |||
|HGNC= | |||
|MCL_coexpression_id=2837 | |||
|UniProt=Q8CFV4 | |||
|association_with_transcript=0bp_to_ENSMUST00000037623,NM_153529,uc007qcm.1_5end | |||
|description=CAGE_peak_1_at_Nrn1_5end | |||
|id=chr13:36826319..36826361,- | |||
|ontology_enrichment_celltype=CL:0000117!1.88e-07!23;CL:0000337!1.88e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-07,23;CL:0000337,1.31e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.23e-11!34;UBERON:0001017!1.79e-11!73;UBERON:0005743!1.79e-11!73;UBERON:0000073!3.35e-11!75;UBERON:0001016!3.35e-11!75;UBERON:0001049!4.55e-11!52;UBERON:0005068!4.55e-11!52;UBERON:0006241!4.55e-11!52;UBERON:0007135!4.55e-11!52;UBERON:0002107!1.21e-10!22;UBERON:0007499!1.21e-10!22;UBERON:0006925!1.21e-10!22;UBERON:0009497!1.21e-10!22;UBERON:0000015!1.21e-10!22;UBERON:0002423!1.21e-10!22;UBERON:0006235!1.21e-10!22;UBERON:0008835!1.21e-10!22;UBERON:0003894!1.21e-10!22;UBERON:0004161!1.21e-10!22;UBERON:0008836!1.21e-10!22;UBERON:0009854!1.96e-10!23;UBERON:0009856!1.96e-10!23;UBERON:0000955!2.26e-10!50;UBERON:0006238!2.26e-10!50;UBERON:0002616!4.91e-10!49;UBERON:0002791!1.22e-09!29;UBERON:0003528!1.22e-09!29;UBERON:0001893!1.22e-09!29;UBERON:0000025!1.28e-09!114;UBERON:0004121!1.39e-09!102;UBERON:0000924!1.39e-09!102;UBERON:0006601!1.39e-09!102;UBERON:0000468!2.23e-09!333;UBERON:0004111!3.12e-09!122;UBERON:0002346!5.46e-09!71;UBERON:0003075!5.46e-09!71;UBERON:0007284!5.46e-09!71;UBERON:0000033!1.36e-08!63;UBERON:0002365!3.46e-08!25;UBERON:0002330!3.46e-08!25;UBERON:0000956!6.42e-08!21;UBERON:0001869!6.42e-08!21;UBERON:0000203!6.42e-08!21;UBERON:0003080!7.68e-08!40;UBERON:0002780!2.02e-07!39;UBERON:0001890!2.02e-07!39;UBERON:0006240!2.02e-07!39;UBERON:0003056!3.61e-07!49;UBERON:0002021!4.17e-07!10;UBERON:0000411!4.17e-07!10;UBERON:0001950!4.17e-07!10;UBERON:0002619!5.21e-07!17;UBERON:0000922!7.94e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.66e-12,34;UBERON:0000073,8.96e-12,54;UBERON:0001017,2.68e-11,73;UBERON:0001016,4.98e-11,75;UBERON:0002107,6.95e-11,22;UBERON:0007499,6.95e-11,22;UBERON:0006925,6.95e-11,22;UBERON:0009497,6.95e-11,22;UBERON:0000015,6.95e-11,22;UBERON:0002423,6.95e-11,22;UBERON:0006235,6.95e-11,22;UBERON:0008835,6.95e-11,22;UBERON:0003894,6.95e-11,22;UBERON:0004161,6.95e-11,22;UBERON:0008836,6.95e-11,22;UBERON:0001049,7.27e-11,52;UBERON:0005068,7.27e-11,52;UBERON:0006241,7.27e-11,52;UBERON:0007135,7.27e-11,52;UBERON:0009854,1.14e-10,23;UBERON:0009856,1.14e-10,23;UBERON:0003528,7.44e-10,29;UBERON:0002791,7.44e-10,29;UBERON:0001893,7.44e-10,29;UBERON:0004121,2.21e-09,95;UBERON:0000924,2.21e-09,95;UBERON:0006601,2.21e-09,95;UBERON:0002346,7.21e-09,64;UBERON:0003075,7.21e-09,64;UBERON:0007284,7.21e-09,64;UBERON:0000955,7.23e-09,47;UBERON:0006238,7.23e-09,47;UBERON:0000025,1.05e-08,114;UBERON:0002616,1.54e-08,46;UBERON:0002365,2.70e-08,25;UBERON:0002330,2.70e-08,25;UBERON:0004111,3.05e-08,122;UBERON:0010371,3.15e-08,73;UBERON:0000956,4.35e-08,21;UBERON:0001869,4.35e-08,21;UBERON:0000203,4.35e-08,21;UBERON:0003080,1.75e-07,40;UBERON:0002021,2.97e-07,10;UBERON:0000411,2.97e-07,10;UBERON:0001950,2.97e-07,10;UBERON:0002619,3.73e-07,17;UBERON:0002780,4.61e-07,39;UBERON:0001890,4.61e-07,39;UBERON:0006240,4.61e-07,39 | |||
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| |||
|short_description=p1@Nrn1 | |||
}} | |||
Revision as of 00:26, 13 September 2013
| Short description: | p1@Nrn1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Nrn1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2837 |
| Association with transcript: | 0bp_to_ENSMUST00000037623, NM_153529, uc007qcm.1_5end |
| EntrezGene: | Nrn1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.31e-07 | 23 |
| neuroblast (sensu Vertebrata) | 1.31e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
