FFCP PHASE1:Hg19::chr3:58512482..58512504,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8309|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=120|TSSclassifier=S|UniProt=|association_with_transcript=-6bp_to_ENST00000467738_5end|description=CAGE_peak_2_at_ACOX2_5end|id=chr3:58512482..58512504,-|ontology_enrichment_celltype=CL:0002194!6.95e-21!63;CL:0000576!6.95e-21!63;CL:0000040!6.95e-21!63;CL:0000559!6.95e-21!63;CL:0002057!7.93e-21!42;CL:0000548!2.14e-20!679;CL:0000004!2.14e-20!679;CL:0000255!2.14e-20!679;CL:0000012!5.15e-20!682;CL:0002009!2.30e-19!65;CL:0000860!3.95e-19!45;CL:0002371!8.25e-17!591;CL:0000144!1.05e-16!625;CL:0000839!5.01e-16!70;CL:0000557!1.98e-15!71;CL:0000766!3.17e-14!76;CL:0000003!9.86e-14!722;CL:0000055!3.04e-13!180;CL:0000034!1.68e-12!444;CL:0000723!5.99e-12!436;CL:0000048!7.97e-12!430;CL:0000393!2.22e-09!60;CL:0000211!2.22e-09!60;CL:0002321!4.12e-09!248;CL:0000220!6.66e-09!246;CL:0000680!6.91e-08!57;CL:0000056!6.91e-08!57;CL:0000355!6.91e-08!57;CL:0000187!8.67e-08!54;CL:0000183!9.09e-08!59;CL:0002319!5.06e-07!25|ontology_enrichment_celltype_v019=CL:0000473;5.25e-21;39!CL:0000234;5.25e-21;39!CL:0000860;1.10e-20;33!CL:0002057;1.10e-20;33!CL:0000576;1.93e-13;48!CL:0000766;1.13e-10;69!CL:0002319;2.35e-08;25|ontology_enrichment_celltype_v019_2=CL:0000473,1.16e-30,48;CL:0000234,1.16e-30,48;CL:0002194,4.11e-28,59;CL:0000576,4.11e-28,59;CL:0000040,4.11e-28,59;CL:0000559,4.11e-28,59;CL:0002009,1.44e-26,61;CL:0000860,1.10e-25,42;CL:0002057,1.10e-25,42;CL:0000839,3.88e-23,66;CL:0000557,1.62e-22,67;CL:0000766,1.94e-21,72;CL:0000034,8.33e-12,441;CL:0000048,1.86e-11,427;CL:0000723,2.39e-11,433;CL:0000763,1.43e-10,108;CL:0000049,1.43e-10,108;CL:0002319,1.84e-08,25;CL:0002087,3.49e-08,115;CL:0000219,6.58e-08,386|ontology_enrichment_development_v019=CL:0002057;6.73e-19;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!3.95e-21!167;UBERON:0004765!1.81e-15!101;UBERON:0001434!1.81e-15!101;UBERON:0002371!4.91e-15!80;UBERON:0001474!4.23e-14!86;UBERON:0002405!1.58e-13!115;UBERON:0000926!1.77e-12!448;UBERON:0004120!1.77e-12!448;UBERON:0006603!1.77e-12!448;UBERON:0000922!4.45e-12!612;UBERON:0000923!1.41e-11!604;UBERON:0005291!1.41e-11!604;UBERON:0006598!1.41e-11!604;UBERON:0002532!1.41e-11!604;UBERON:0002050!2.18e-11!605;UBERON:0005423!2.18e-11!605;UBERON:0002390!5.30e-11!102;UBERON:0003061!5.30e-11!102;UBERON:0002193!1.22e-09!112;UBERON:0000468!1.74e-09!659;UBERON:0000467!3.83e-09!625;UBERON:0000480!5.63e-09!626;UBERON:0000914!9.54e-09!83;UBERON:0002329!9.54e-09!83;UBERON:0003077!9.54e-09!83;UBERON:0003059!9.54e-09!83;UBERON:0007282!9.54e-09!83;UBERON:0009618!9.54e-09!83;UBERON:0007285!9.54e-09!83;UBERON:0003081!2.28e-08!216;UBERON:0000490!8.92e-08!138;UBERON:0004290!3.15e-07!70|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.49e-21,76;UBERON:0002204,1.12e-20,167;UBERON:0001434,2.25e-19,100;UBERON:0004765,2.58e-19,90;UBERON:0001474,1.12e-18,82;UBERON:0002405,2.23e-14,93;UBERON:0002390,6.82e-14,98;UBERON:0003061,6.82e-14,98;UBERON:0002193,1.39e-11,108;UBERON:0000922,6.40e-11,592;UBERON:0000923,1.63e-10,560;UBERON:0010316,1.63e-10,560;UBERON:0005291,1.63e-10,560;UBERON:0006598,1.63e-10,560;UBERON:0010317,1.63e-10,560;UBERON:0002532,1.63e-10,560;UBERON:0002050,1.89e-10,564;UBERON:0005423,2.73e-10,581;UBERON:0000926,9.25e-09,315;UBERON:0004120,9.25e-09,315;UBERON:0006603,9.25e-09,315;UBERON:0003081,1.62e-08,203|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,1.47440361900905,1.39560233594486,0,0,1.8564952944007,0.662794751455832,1.34465029290355,1.20538905604795,0.730310090387373,1.46379839637152,7.51038454268406,3.06001036866379,0.940364164434263,11.4494394852423,20.6680381860055,9.91786852798942,0.229240217243854,0,0.157421562627358,1.18009283054671,0,1.70297735647684,0,0.6024118375565,1.10926203050036,0,0,0,2.76997704265939,3.00816671205213,1.51907609501096,0,0,0,5.37973483484389,7.935394817465,0.727752183563449,7.43772918098191,12.3350366406548,7.74265927237759,4.60307827715441,5.37937483711111,4.02019790810595,14.1345729102014,11.6187243045089,4.06279459783025,10.5415710143859,8.73299680185107,8.53949240891322,6.73384563215986,13.4790191371959,3.19668562899521,1.31940520074686,2.59302754908121,2.98357325372886,11.0279510678862,7.94339314567596,5.60540024096017,4.77372463987812,8.86520961314342,4.99534342821768,8.47559303686716,11.4166067156145,6.96217252369946,3.80259515361495,5.10250319916104,4.40283155567589,2.80821577866238,2.25265339262259,0.803627933485401,0.570025487482497,1.19350006319454,1.64397738388171,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,6.03630773733273,0.12786256184353,0.361439152384566,1.00267582127178,0.579386075843295,0.795285947051099,0,6.90104165297695,1.99556457716308,5.00658278450818,0.130979075497713,0.36429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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8309 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=120 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENST00000467738_5end | |||
|description=CAGE_peak_2_at_ACOX2_5end | |||
|id=chr3:58512482..58512504,- | |||
|ontology_enrichment_celltype=CL:0002194!6.95e-21!63;CL:0000576!6.95e-21!63;CL:0000040!6.95e-21!63;CL:0000559!6.95e-21!63;CL:0002057!7.93e-21!42;CL:0000548!2.14e-20!679;CL:0000004!2.14e-20!679;CL:0000255!2.14e-20!679;CL:0000012!5.15e-20!682;CL:0002009!2.30e-19!65;CL:0000860!3.95e-19!45;CL:0002371!8.25e-17!591;CL:0000144!1.05e-16!625;CL:0000839!5.01e-16!70;CL:0000557!1.98e-15!71;CL:0000766!3.17e-14!76;CL:0000003!9.86e-14!722;CL:0000055!3.04e-13!180;CL:0000034!1.68e-12!444;CL:0000723!5.99e-12!436;CL:0000048!7.97e-12!430;CL:0000393!2.22e-09!60;CL:0000211!2.22e-09!60;CL:0002321!4.12e-09!248;CL:0000220!6.66e-09!246;CL:0000680!6.91e-08!57;CL:0000056!6.91e-08!57;CL:0000355!6.91e-08!57;CL:0000187!8.67e-08!54;CL:0000183!9.09e-08!59;CL:0002319!5.06e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.25e-21;39!CL:0000234;5.25e-21;39!CL:0000860;1.10e-20;33!CL:0002057;1.10e-20;33!CL:0000576;1.93e-13;48!CL:0000766;1.13e-10;69!CL:0002319;2.35e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.16e-30,48;CL:0000234,1.16e-30,48;CL:0002194,4.11e-28,59;CL:0000576,4.11e-28,59;CL:0000040,4.11e-28,59;CL:0000559,4.11e-28,59;CL:0002009,1.44e-26,61;CL:0000860,1.10e-25,42;CL:0002057,1.10e-25,42;CL:0000839,3.88e-23,66;CL:0000557,1.62e-22,67;CL:0000766,1.94e-21,72;CL:0000034,8.33e-12,441;CL:0000048,1.86e-11,427;CL:0000723,2.39e-11,433;CL:0000763,1.43e-10,108;CL:0000049,1.43e-10,108;CL:0002319,1.84e-08,25;CL:0002087,3.49e-08,115;CL:0000219,6.58e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.73e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.95e-21!167;UBERON:0004765!1.81e-15!101;UBERON:0001434!1.81e-15!101;UBERON:0002371!4.91e-15!80;UBERON:0001474!4.23e-14!86;UBERON:0002405!1.58e-13!115;UBERON:0000926!1.77e-12!448;UBERON:0004120!1.77e-12!448;UBERON:0006603!1.77e-12!448;UBERON:0000922!4.45e-12!612;UBERON:0000923!1.41e-11!604;UBERON:0005291!1.41e-11!604;UBERON:0006598!1.41e-11!604;UBERON:0002532!1.41e-11!604;UBERON:0002050!2.18e-11!605;UBERON:0005423!2.18e-11!605;UBERON:0002390!5.30e-11!102;UBERON:0003061!5.30e-11!102;UBERON:0002193!1.22e-09!112;UBERON:0000468!1.74e-09!659;UBERON:0000467!3.83e-09!625;UBERON:0000480!5.63e-09!626;UBERON:0000914!9.54e-09!83;UBERON:0002329!9.54e-09!83;UBERON:0003077!9.54e-09!83;UBERON:0003059!9.54e-09!83;UBERON:0007282!9.54e-09!83;UBERON:0009618!9.54e-09!83;UBERON:0007285!9.54e-09!83;UBERON:0003081!2.28e-08!216;UBERON:0000490!8.92e-08!138;UBERON:0004290!3.15e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.49e-21,76;UBERON:0002204,1.12e-20,167;UBERON:0001434,2.25e-19,100;UBERON:0004765,2.58e-19,90;UBERON:0001474,1.12e-18,82;UBERON:0002405,2.23e-14,93;UBERON:0002390,6.82e-14,98;UBERON:0003061,6.82e-14,98;UBERON:0002193,1.39e-11,108;UBERON:0000922,6.40e-11,592;UBERON:0000923,1.63e-10,560;UBERON:0010316,1.63e-10,560;UBERON:0005291,1.63e-10,560;UBERON:0006598,1.63e-10,560;UBERON:0010317,1.63e-10,560;UBERON:0002532,1.63e-10,560;UBERON:0002050,1.89e-10,564;UBERON:0005423,2.73e-10,581;UBERON:0000926,9.25e-09,315;UBERON:0004120,9.25e-09,315;UBERON:0006603,9.25e-09,315;UBERON:0003081,1.62e-08,203 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,1.47440361900905,1.39560233594486,0,0,1.8564952944007,0.662794751455832,1.34465029290355,1.20538905604795,0.730310090387373,1.46379839637152,7.51038454268406,3.06001036866379,0.940364164434263,11.4494394852423,20.6680381860055,9.91786852798942,0.229240217243854,0,0.157421562627358,1.18009283054671,0,1.70297735647684,0,0.6024118375565,1.10926203050036,0,0,0,2.76997704265939,3.00816671205213,1.51907609501096,0,0,0,5.37973483484389,7.935394817465,0.727752183563449,7.43772918098191,12.3350366406548,7.74265927237759,4.60307827715441,5.37937483711111,4.02019790810595,14.1345729102014,11.6187243045089,4.06279459783025,10.5415710143859,8.73299680185107,8.53949240891322,6.73384563215986,13.4790191371959,3.19668562899521,1.31940520074686,2.59302754908121,2.98357325372886,11.0279510678862,7.94339314567596,5.60540024096017,4.77372463987812,8.86520961314342,4.99534342821768,8.47559303686716,11.4166067156145,6.96217252369946,3.80259515361495,5.10250319916104,4.40283155567589,2.80821577866238,2.25265339262259,0.803627933485401,0.570025487482497,1.19350006319454,1.64397738388171,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,6.03630773733273,0.12786256184353,0.361439152384566,1.00267582127178,0.579386075843295,0.795285947051099,0,6.90104165297695,1.99556457716308,5.00658278450818,0.130979075497713,0.364295288292542,3.33705998505986,5.8418530857843,5.74628133087582,8.50930947320737,0.715471872916026,0.571994910780128,0,0.198762407366705,0,0.347140501607594,1.13061588384802,0.838998872419812,0.550236083880135,1.25396979922086,0,0,0,0.402829317109147,2.28081631715554,0,0.735326160691737,0.81014194788176,0.446498641420399,0,0.563057402416611,0,0,0.549605231791222,0,0,0,0,0.886413581652058,0,0,2.4826786753885,0,0,0.74000264525148,0.933633106199299,0.538842688278752,1.30769522490767,2.4217188423189,2.30470369792,6.56100009134631,0.624320153660641,1.1409436430889,0.747243402759005,3.17073146338165,2.26622122115384,3.37081936085396,7.14539599392126,7.86139630795315,5.78624374584287,0,0,1.82032272387605,0,3.03005005117319,4.37914819551875,3.87889761677856,0.877955241761676,1.22595118319608,0.150238058906597,2.60894021268048,0.179389635688862,0,0,0,1.03052529238439,0,0,0.337552664482532,0.487185025805993,0,0.0920498986422993,0,0.710019185033229,0.302256294682921,0.508681776931463,0.966304265816484,1.09098448236334,0,0.487894824518382,1.06023814657188,1.04574548582567,1.86589899027667,3.28017106138317,2.55484151353081,0,0,5.52539685409922,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,2.057870056657,0,11.4079531339648,11.7939266001315,5.90789906681404,0,5.53447973444011,3.25978839567199,0.329250856225877,1.1240175325762,1.00528972411631,0.833296006426766,0.325808305310325,4.15973914111831,5.77325368101093,5.79652024875384,0.234817388471643,0.288732895522148,0.462985512576611,0.190254152234598,3.1608175918371,0.858486162094873,2.70838706696137,34.1646227103287,15.9035343648939,1.87467667973554,0.335964256397719,0.850650583454319,0.985143749731331,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,3.7003257833969,0.43596006883328,3.3735611477637,0.129271715757778,0,1.690605505112,0,0,3.85811061393213,2.83698264046557,3.46348832720929,0,1.08524321078289,2.46972101034231,0.977208552881205,0,1.58390374586686,0,0.871533458600294,0,9.72990245129524,2.51128545716063,18.9750545534728,0,0,4.27910715122155,0.144781306667579,1.43833425785268,0.358121926479791,0.224170287987055,0,0,0.385029108839245,67.0809807947303,10.4111883086097,3.86644406388848,8.04078073604874,2.55175500661265,0,0,0,1.10422342547226,3.50119364741774,2.17012018959788,0,0,0,0,0,2.27407504055985,1.03473071292505,1.32845119707087,1.29058417979192,1.47702144595741,0.391602314925481,0.343143423810856,1.24060815673732,1.50999940573032,1.28073069364133,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,3.39261326365842,2.84098760501003,4.84550220481474,9.34657972530518,2.90525946149898,2.29632954224082,0,0,0.574072240823034,0.728364672026868,0,0,0.0770153371044148,0,1.46139224653261,0,0,0.340187410553031,0.431831832204279,0,0.270946437543853,0.501689773854853,0.509752546090077,0.831076008928724,0.895499018888713,0,0,1.28225062558195,0.656029291399411,0.325378394664303,0.515205058238611,0,0,0,0,0,1.54673149267395,2.92692372517824,2.30255512089194,1.65403886981437,1.93356440762893,1.0151168573996,3.06815858697963,0.356128142586949,0.165284915360978,0,0,0,0.464845549297286,0,4.8792608911242,5.23657086299351,2.12922412126809,4.34966496037536,1.66791797193528,0.143124886741991,0.744316738719335,0,0.38126038784765,0.767693373934002,0,7.95508119814842,0,0.539617372749944,0.274537029736055,0.942499218765491,2.22400729730648,1.58510321173008,5.47635993110675,0.48763373908959,0.731140468893853,1.05650146756755,0.272999822815972,0,10.1707304958219,7.16774946609961,0.6634389752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| |||
|short_description=p2@ACOX2 | |||
}} |
Revision as of 01:02, 13 September 2013
Short description: | p2@ACOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ACOX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000467738_5end |
EntrezGene: | ACOX2 |
HGNC: | 120 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.16e-30 | 48 |
phagocyte | 1.16e-30 | 48 |
monopoietic cell | 4.11e-28 | 59 |
monocyte | 4.11e-28 | 59 |
monoblast | 4.11e-28 | 59 |
promonocyte | 4.11e-28 | 59 |
macrophage dendritic cell progenitor | 1.44e-26 | 61 |
classical monocyte | 1.10e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-25 | 42 |
myeloid lineage restricted progenitor cell | 3.88e-23 | 66 |
granulocyte monocyte progenitor cell | 1.62e-22 | 67 |
myeloid leukocyte | 1.94e-21 | 72 |
stem cell | 8.33e-12 | 441 |
multi fate stem cell | 1.86e-11 | 427 |
somatic stem cell | 2.39e-11 | 433 |
myeloid cell | 1.43e-10 | 108 |
common myeloid progenitor | 1.43e-10 | 108 |
neural cell | 1.84e-08 | 25 |
nongranular leukocyte | 3.49e-08 | 115 |
motile cell | 6.58e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.49e-21 | 76 |
musculoskeletal system | 1.12e-20 | 167 |
skeletal system | 2.25e-19 | 100 |
skeletal element | 2.58e-19 | 90 |
bone element | 1.12e-18 | 82 |
immune system | 2.23e-14 | 93 |
hematopoietic system | 6.82e-14 | 98 |
blood island | 6.82e-14 | 98 |
hemolymphoid system | 1.39e-11 | 108 |
embryo | 6.40e-11 | 592 |
germ layer | 1.63e-10 | 560 |
germ layer / neural crest | 1.63e-10 | 560 |
embryonic tissue | 1.63e-10 | 560 |
presumptive structure | 1.63e-10 | 560 |
germ layer / neural crest derived structure | 1.63e-10 | 560 |
epiblast (generic) | 1.63e-10 | 560 |
embryonic structure | 1.89e-10 | 564 |
developing anatomical structure | 2.73e-10 | 581 |
mesoderm | 9.25e-09 | 315 |
mesoderm-derived structure | 9.25e-09 | 315 |
presumptive mesoderm | 9.25e-09 | 315 |
lateral plate mesoderm | 1.62e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.