FFCP PHASE1:Mm9::chr14:67453090..67453135,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=139|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:67453090..67453135,-|id=chr14:67453090..67453135,-|ontology_enrichment_celltype=CL:0000221!1.45e-16!44;CL:0000133!1.45e-16!44;CL:0002319!7.49e-16!43;CL:0000055!1.11e-14!50;CL:0000540!2.44e-13!33;CL:0000047!2.44e-13!33;CL:0000031!2.44e-13!33;CL:0000404!2.44e-13!33;CL:0000393!8.44e-13!39;CL:0000211!8.44e-13!39;CL:0000117!3.81e-12!23;CL:0000337!3.81e-12!23;CL:0002321!3.81e-08!70;CL:0000220!3.81e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,2.89e-13,23;CL:0000337,2.89e-13,23;CL:0000221,4.33e-12,44;CL:0000133,4.33e-12,44;CL:0002319,5.73e-11,43;CL:0000540,2.43e-09,33;CL:0000047,2.43e-09,33;CL:0000031,2.43e-09,33;CL:0000404,2.43e-09,33;CL:0000393,2.57e-08,39;CL:0000211,2.57e-08,39;CL:0002321,3.76e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.89e-18!75;UBERON:0001016!3.89e-18!75;UBERON:0001017!7.71e-18!73;UBERON:0005743!7.71e-18!73;UBERON:0002020!1.30e-13!34;UBERON:0004121!6.97e-13!102;UBERON:0000924!6.97e-13!102;UBERON:0006601!6.97e-13!102;UBERON:0002791!5.97e-11!29;UBERON:0003528!5.97e-11!29;UBERON:0001893!5.97e-11!29;UBERON:0001049!1.44e-10!52;UBERON:0005068!1.44e-10!52;UBERON:0006241!1.44e-10!52;UBERON:0007135!1.44e-10!52;UBERON:0002346!9.28e-10!71;UBERON:0003075!9.28e-10!71;UBERON:0007284!9.28e-10!71;UBERON:0000955!1.87e-09!50;UBERON:0006238!1.87e-09!50;UBERON:0002616!3.56e-09!49;UBERON:0000033!8.13e-09!63;UBERON:0003080!8.53e-08!40;UBERON:0002780!2.06e-07!39;UBERON:0001890!2.06e-07!39;UBERON:0006240!2.06e-07!39;UBERON:0000956!2.32e-07!21;UBERON:0001869!2.32e-07!21;UBERON:0000203!2.32e-07!21;UBERON:0000025!3.66e-07!114;UBERON:0003056!3.66e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-13,73;UBERON:0001016,3.86e-13,75;UBERON:0002020,1.63e-12,34;UBERON:0000073,3.60e-11,54;UBERON:0004121,9.12e-10,95;UBERON:0000924,9.12e-10,95;UBERON:0006601,9.12e-10,95;UBERON:0001049,1.55e-09,52;UBERON:0005068,1.55e-09,52;UBERON:0006241,1.55e-09,52;UBERON:0007135,1.55e-09,52;UBERON:0000025,5.76e-09,114;UBERON:0003528,1.02e-08,29;UBERON:0002791,1.02e-08,29;UBERON:0001893,1.02e-08,29;UBERON:0004111,1.09e-08,122;UBERON:0002048,1.28e-07,14;UBERON:0000117,1.28e-07,14;UBERON:0000171,1.28e-07,14;UBERON:0000170,1.28e-07,14;UBERON:0005597,1.28e-07,14;UBERON:0000118,1.28e-07,14;UBERON:0002240,2.36e-07,6;UBERON:0005174,2.36e-07,6;UBERON:0001137,2.36e-07,6;UBERON:0002346,8.58e-07,64;UBERON:0003075,8.58e-07,64;UBERON:0007284,8.58e-07,64|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0.872100625521786,1.31811709640683,0.388859798148567,0.699932108126813,2.87505128729943,0.167782606057736,0,0,0.771778308107841,0.286533439938757,1.03134418455488,0.809265843438391,1.05798195854407,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0.7104801149461,1.19840044207362,2.30530983192933,1.24427534770173,1.35005938331691,0.420649922702764,1.71390590642282,2.42955395046775,0.979926393719632,0.862609239164127,1.83843757322004,1.10115880999389,1.27687338085188,2.30409799884365,0.791317726381163,2.37867873366265,0.52091337055676,0.837548997004143,1.12552522006336,2.75036845998258,0.589257170947335,2.27794689278565,1.1183966749518,0.302904773332736,0.453429360640713,0.289864488701678,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0.35333957451034,2.81686839553361,1.28326477414318,0,0,0.216491041011214,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.04853447583376,1.83000241127451,0.753926112677186,0.173824320192276,0.255715457330331,0.62336413367868,0,1.32391173005411,2.73695335342205,18.9542068825256,0.210441855886474,0.390361328888111,0,0.360124259610698,0,0.476255494059295,0,0.468508622798644,0.517406741478031,0.431135985865684,0.378212160335639,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0,0.465067889500816,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0.514523061896422,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.739012760666419,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,10.0503754465089,17.139142143793,33.5629874315414,2.52216230569906,3.10050565508285,1.91345722388985,0.81931657357869,1.55416483679306,1.01254341007058,0,0.54390568381871,0,0,1.28440471990234,0.35163505977661,0.163934945376675,0,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,1.13230612315533,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0.727067458955011,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,1.48340241608408,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.337912250981556,0.58678619322877,0.781226309063701,0.209718688851422,0.241584120826006,0.288030006257865,0,0.405450430580328,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.228620419965,0,0,0,0.116876902181569,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,1.6942555278512,1.38097570952153,0.572895513439397,1.54667864109319,0.685082519770642,2.2661816921691,1.35004500046361,0,0.453142408984205,1.55328093525546,0.62272408550506,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,1.28367683836726,0.252697211763798,0.50695859978048,1.13175804831646,0.936415074698824,0.576226371643824,0.689225627467359,0,0.463537303779422,1.35036454324594,0.824171801606613,0.883193520806384,1.37147700954166,1.06485483695602,0.476872379894642,0.872078499793971,1.41164070622996,0.930760686808441,0.914639864363863,1.05227884575137,1.35804113845862,2.24456908663095,0.711810108745045,0.29551344712669,1.22769312950907,0.309873682371932,0.771626443924566,0.499621155875892,0.467863216890817,0.859484216193193,0.382576664137687,0.220591419119515,0|short_description=p@chr14:67453090..67453135,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=139 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:67453090..67453135,- | |||
|id=chr14:67453090..67453135,- | |||
|ontology_enrichment_celltype=CL:0000221!1.45e-16!44;CL:0000133!1.45e-16!44;CL:0002319!7.49e-16!43;CL:0000055!1.11e-14!50;CL:0000540!2.44e-13!33;CL:0000047!2.44e-13!33;CL:0000031!2.44e-13!33;CL:0000404!2.44e-13!33;CL:0000393!8.44e-13!39;CL:0000211!8.44e-13!39;CL:0000117!3.81e-12!23;CL:0000337!3.81e-12!23;CL:0002321!3.81e-08!70;CL:0000220!3.81e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.89e-13,23;CL:0000337,2.89e-13,23;CL:0000221,4.33e-12,44;CL:0000133,4.33e-12,44;CL:0002319,5.73e-11,43;CL:0000540,2.43e-09,33;CL:0000047,2.43e-09,33;CL:0000031,2.43e-09,33;CL:0000404,2.43e-09,33;CL:0000393,2.57e-08,39;CL:0000211,2.57e-08,39;CL:0002321,3.76e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.89e-18!75;UBERON:0001016!3.89e-18!75;UBERON:0001017!7.71e-18!73;UBERON:0005743!7.71e-18!73;UBERON:0002020!1.30e-13!34;UBERON:0004121!6.97e-13!102;UBERON:0000924!6.97e-13!102;UBERON:0006601!6.97e-13!102;UBERON:0002791!5.97e-11!29;UBERON:0003528!5.97e-11!29;UBERON:0001893!5.97e-11!29;UBERON:0001049!1.44e-10!52;UBERON:0005068!1.44e-10!52;UBERON:0006241!1.44e-10!52;UBERON:0007135!1.44e-10!52;UBERON:0002346!9.28e-10!71;UBERON:0003075!9.28e-10!71;UBERON:0007284!9.28e-10!71;UBERON:0000955!1.87e-09!50;UBERON:0006238!1.87e-09!50;UBERON:0002616!3.56e-09!49;UBERON:0000033!8.13e-09!63;UBERON:0003080!8.53e-08!40;UBERON:0002780!2.06e-07!39;UBERON:0001890!2.06e-07!39;UBERON:0006240!2.06e-07!39;UBERON:0000956!2.32e-07!21;UBERON:0001869!2.32e-07!21;UBERON:0000203!2.32e-07!21;UBERON:0000025!3.66e-07!114;UBERON:0003056!3.66e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-13,73;UBERON:0001016,3.86e-13,75;UBERON:0002020,1.63e-12,34;UBERON:0000073,3.60e-11,54;UBERON:0004121,9.12e-10,95;UBERON:0000924,9.12e-10,95;UBERON:0006601,9.12e-10,95;UBERON:0001049,1.55e-09,52;UBERON:0005068,1.55e-09,52;UBERON:0006241,1.55e-09,52;UBERON:0007135,1.55e-09,52;UBERON:0000025,5.76e-09,114;UBERON:0003528,1.02e-08,29;UBERON:0002791,1.02e-08,29;UBERON:0001893,1.02e-08,29;UBERON:0004111,1.09e-08,122;UBERON:0002048,1.28e-07,14;UBERON:0000117,1.28e-07,14;UBERON:0000171,1.28e-07,14;UBERON:0000170,1.28e-07,14;UBERON:0005597,1.28e-07,14;UBERON:0000118,1.28e-07,14;UBERON:0002240,2.36e-07,6;UBERON:0005174,2.36e-07,6;UBERON:0001137,2.36e-07,6;UBERON:0002346,8.58e-07,64;UBERON:0003075,8.58e-07,64;UBERON:0007284,8.58e-07,64 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0.872100625521786,1.31811709640683,0.388859798148567,0.699932108126813,2.87505128729943,0.167782606057736,0,0,0.771778308107841,0.286533439938757,1.03134418455488,0.809265843438391,1.05798195854407,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0.7104801149461,1.19840044207362,2.30530983192933,1.24427534770173,1.35005938331691,0.420649922702764,1.71390590642282,2.42955395046775,0.979926393719632,0.862609239164127,1.83843757322004,1.10115880999389,1.27687338085188,2.30409799884365,0.791317726381163,2.37867873366265,0.52091337055676,0.837548997004143,1.12552522006336,2.75036845998258,0.589257170947335,2.27794689278565,1.1183966749518,0.302904773332736,0.453429360640713,0.289864488701678,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0.35333957451034,2.81686839553361,1.28326477414318,0,0,0.216491041011214,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.04853447583376,1.83000241127451,0.753926112677186,0.173824320192276,0.255715457330331,0.62336413367868,0,1.32391173005411,2.73695335342205,18.9542068825256,0.210441855886474,0.390361328888111,0,0.360124259610698,0,0.476255494059295,0,0.468508622798644,0.517406741478031,0.431135985865684,0.378212160335639,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0,0.465067889500816,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0.514523061896422,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.739012760666419,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,10.0503754465089,17.139142143793,33.5629874315414,2.52216230569906,3.10050565508285,1.91345722388985,0.81931657357869,1.55416483679306,1.01254341007058,0,0.54390568381871,0,0,1.28440471990234,0.35163505977661,0.163934945376675,0,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,1.13230612315533,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0.727067458955011,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,1.48340241608408,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.337912250981556,0.58678619322877,0.781226309063701,0.209718688851422,0.241584120826006,0.288030006257865,0,0.405450430580328,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.228620419965,0,0,0,0.116876902181569,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,1.6942555278512,1.38097570952153,0.572895513439397,1.54667864109319,0.685082519770642,2.2661816921691,1.35004500046361,0,0.453142408984205,1.55328093525546,0.62272408550506,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,1.28367683836726,0.252697211763798,0.50695859978048,1.13175804831646,0.936415074698824,0.576226371643824,0.689225627467359,0,0.463537303779422,1.35036454324594,0.824171801606613,0.883193520806384,1.37147700954166,1.06485483695602,0.476872379894642,0.872078499793971,1.41164070622996,0.930760686808441,0.914639864363863,1.05227884575137,1.35804113845862,2.24456908663095,0.711810108745045,0.29551344712669,1.22769312950907,0.309873682371932,0.771626443924566,0.499621155875892,0.467863216890817,0.859484216193193,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr14:67453090..67453135,- | |||
}} |
Revision as of 02:51, 13 September 2013
Short description: | p@chr14:67453090..67453135, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:67453090..67453135, - |
Coexpression cluster: | MCL_coexpression_mm9:139 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.89e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.89e-13 | 23 |
ectodermal cell | 4.33e-12 | 44 |
neurectodermal cell | 4.33e-12 | 44 |
neural cell | 5.73e-11 | 43 |
neuron | 2.43e-09 | 33 |
neuronal stem cell | 2.43e-09 | 33 |
neuroblast | 2.43e-09 | 33 |
electrically signaling cell | 2.43e-09 | 33 |
electrically responsive cell | 2.57e-08 | 39 |
electrically active cell | 2.57e-08 | 39 |
embryonic cell | 3.76e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.03e-13 | 73 |
nervous system | 3.86e-13 | 75 |
gray matter | 1.63e-12 | 34 |
regional part of nervous system | 3.60e-11 | 54 |
ectoderm-derived structure | 9.12e-10 | 95 |
ectoderm | 9.12e-10 | 95 |
presumptive ectoderm | 9.12e-10 | 95 |
neural tube | 1.55e-09 | 52 |
neural rod | 1.55e-09 | 52 |
future spinal cord | 1.55e-09 | 52 |
neural keel | 1.55e-09 | 52 |
tube | 5.76e-09 | 114 |
brain grey matter | 1.02e-08 | 29 |
regional part of telencephalon | 1.02e-08 | 29 |
telencephalon | 1.02e-08 | 29 |
anatomical conduit | 1.09e-08 | 122 |
lung | 1.28e-07 | 14 |
respiratory tube | 1.28e-07 | 14 |
respiration organ | 1.28e-07 | 14 |
pair of lungs | 1.28e-07 | 14 |
lung primordium | 1.28e-07 | 14 |
lung bud | 1.28e-07 | 14 |
spinal cord | 2.36e-07 | 6 |
dorsal region element | 2.36e-07 | 6 |
dorsum | 2.36e-07 | 6 |
neurectoderm | 8.58e-07 | 64 |
neural plate | 8.58e-07 | 64 |
presumptive neural plate | 8.58e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.