FFCP PHASE1:Mm9::chr14:70186925..70186927,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:70186925..70186927,-|id=chr14:70186925..70186927,-|ontology_enrichment_celltype=CL:0002319!2.29e-24!43;CL:0000221!1.55e-23!44;CL:0000133!1.55e-23!44;CL:0000117!2.13e-23!23;CL:0000337!2.13e-23!23;CL:0000055!2.98e-22!50;CL:0000540!1.44e-16!33;CL:0000047!1.44e-16!33;CL:0000031!1.44e-16!33;CL:0000404!1.44e-16!33;CL:0000393!2.13e-15!39;CL:0000211!2.13e-15!39;CL:0002321!1.84e-13!70;CL:0000220!1.84e-13!70;CL:0000548!2.21e-09!115;CL:0000004!2.21e-09!115;CL:0000255!2.21e-09!115;CL:0000333!8.14e-09!10;CL:0000095!8.14e-09!10;CL:0000243!8.14e-09!10;CL:0000123!8.14e-09!10;CL:0000125!8.14e-09!10;CL:0000030!8.14e-09!10;CL:0000339!8.14e-09!10;CL:0002371!8.35e-09!118;CL:0000144!2.93e-08!121;CL:0000012!2.93e-08!121;CL:0002609!1.30e-07!6;CL:0002453!1.63e-07!8|ontology_enrichment_celltype_v019_2=CL:0000117,5.34e-38,23;CL:0000337,5.34e-38,23;CL:0002319,6.35e-33,43;CL:0000221,4.02e-32,44;CL:0000133,4.02e-32,44;CL:0000540,7.20e-26,33;CL:0000047,7.20e-26,33;CL:0000031,7.20e-26,33;CL:0000404,7.20e-26,33;CL:0000393,1.44e-21,39;CL:0000211,1.44e-21,39;CL:0002321,2.73e-19,70;CL:0002613,7.91e-15,3;CL:0002611,2.47e-10,2;CL:0002453,1.64e-09,8;CL:0000723,2.09e-09,91;CL:0000048,2.09e-09,91;CL:0000034,1.13e-08,97;CL:0002609,5.78e-08,6;CL:0000333,1.23e-07,10;CL:0000095,1.23e-07,10;CL:0000243,1.23e-07,10;CL:0000123,1.23e-07,10;CL:0000125,1.23e-07,10;CL:0000030,1.23e-07,10;CL:0000339,1.23e-07,10;CL:0002608,2.04e-07,3;CL:0000120,2.19e-07,3;CL:0000128,2.26e-07,6;CL:0000126,2.26e-07,6;CL:0000127,2.26e-07,6;CL:0002610,5.92e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.90e-19!75;UBERON:0001016!6.90e-19!75;UBERON:0001017!1.36e-17!73;UBERON:0005743!1.36e-17!73;UBERON:0004121!4.44e-15!102;UBERON:0000924!4.44e-15!102;UBERON:0006601!4.44e-15!102;UBERON:0001049!2.46e-14!52;UBERON:0005068!2.46e-14!52;UBERON:0006241!2.46e-14!52;UBERON:0007135!2.46e-14!52;UBERON:0002020!1.81e-13!34;UBERON:0002616!5.50e-12!49;UBERON:0000955!1.45e-11!50;UBERON:0006238!1.45e-11!50;UBERON:0002346!3.45e-11!71;UBERON:0003075!3.45e-11!71;UBERON:0007284!3.45e-11!71;UBERON:0003080!3.70e-10!40;UBERON:0000033!4.50e-10!63;UBERON:0002780!1.08e-09!39;UBERON:0001890!1.08e-09!39;UBERON:0006240!1.08e-09!39;UBERON:0002791!3.28e-09!29;UBERON:0003528!3.28e-09!29;UBERON:0001893!3.28e-09!29;UBERON:0003056!4.34e-09!49;UBERON:0007811!1.96e-07!86;UBERON:0000153!3.69e-07!94;UBERON:0002420!5.74e-07!8;UBERON:0007245!5.74e-07!8;UBERON:0010009!5.74e-07!8;UBERON:0010011!5.74e-07!8;UBERON:0000454!5.74e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.15e-18,73;UBERON:0001016,7.74e-18,75;UBERON:0002020,4.00e-15,34;UBERON:0000073,9.33e-15,54;UBERON:0004121,1.52e-13,95;UBERON:0000924,1.52e-13,95;UBERON:0006601,1.52e-13,95;UBERON:0001049,4.07e-11,52;UBERON:0005068,4.07e-11,52;UBERON:0006241,4.07e-11,52;UBERON:0007135,4.07e-11,52;UBERON:0002256,2.47e-10,2;UBERON:0002420,1.48e-09,8;UBERON:0007245,1.48e-09,8;UBERON:0010009,1.48e-09,8;UBERON:0010011,1.48e-09,8;UBERON:0000454,1.48e-09,8;UBERON:0003528,1.65e-09,29;UBERON:0002791,1.65e-09,29;UBERON:0001893,1.65e-09,29;UBERON:0000369,4.18e-09,5;UBERON:0002435,4.18e-09,5;UBERON:0000204,4.18e-09,5;UBERON:0010082,4.18e-09,5;UBERON:0001948,6.92e-09,5;UBERON:0002315,6.92e-09,5;UBERON:0002346,1.12e-08,64;UBERON:0003075,1.12e-08,64;UBERON:0007284,1.12e-08,64;UBERON:0002240,1.75e-07,6;UBERON:0005174,1.75e-07,6;UBERON:0001137,1.75e-07,6;UBERON:0010371,2.25e-07,73;UBERON:0002616,4.75e-07,46;UBERON:0004684,5.92e-07,3;UBERON:0002275,5.92e-07,3;UBERON:0000955,7.13e-07,47;UBERON:0006238,7.13e-07,47;UBERON:0002780,8.27e-07,39;UBERON:0001890,8.27e-07,39;UBERON:0006240,8.27e-07,39|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0.42438965179803,0,0,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0.782391344348039,1.09012578190223,0.878744730937887,1.1665793944457,1.39986421625363,0,0.335565212115473,0,0,0.257259436035947,0.573066879877513,0,0.606949382578793,2.11596391708813,1.26766280701236,0.338844532069132,0,0.899899717281399,0,0,0.599200221036809,1.92109152660777,0.207379224616955,2.16009501330705,0.841299845405528,1.99955689082663,1.10434270475807,0.857435594504678,1.24599112323707,2.75765635983006,1.10115880999389,1.27687338085188,0,1.18697658957174,1.28082701043374,1.56274011167028,1.11673199600552,0.56276261003168,0.916789486660861,0.589257170947335,0.427115042397309,1.1183966749518,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.162137619091711,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0.238744688006273,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0,0,0,0.36630324853453,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr14:70186925..70186927,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:70186925..70186927,- | |||
|id=chr14:70186925..70186927,- | |||
|ontology_enrichment_celltype=CL:0002319!2.29e-24!43;CL:0000221!1.55e-23!44;CL:0000133!1.55e-23!44;CL:0000117!2.13e-23!23;CL:0000337!2.13e-23!23;CL:0000055!2.98e-22!50;CL:0000540!1.44e-16!33;CL:0000047!1.44e-16!33;CL:0000031!1.44e-16!33;CL:0000404!1.44e-16!33;CL:0000393!2.13e-15!39;CL:0000211!2.13e-15!39;CL:0002321!1.84e-13!70;CL:0000220!1.84e-13!70;CL:0000548!2.21e-09!115;CL:0000004!2.21e-09!115;CL:0000255!2.21e-09!115;CL:0000333!8.14e-09!10;CL:0000095!8.14e-09!10;CL:0000243!8.14e-09!10;CL:0000123!8.14e-09!10;CL:0000125!8.14e-09!10;CL:0000030!8.14e-09!10;CL:0000339!8.14e-09!10;CL:0002371!8.35e-09!118;CL:0000144!2.93e-08!121;CL:0000012!2.93e-08!121;CL:0002609!1.30e-07!6;CL:0002453!1.63e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.34e-38,23;CL:0000337,5.34e-38,23;CL:0002319,6.35e-33,43;CL:0000221,4.02e-32,44;CL:0000133,4.02e-32,44;CL:0000540,7.20e-26,33;CL:0000047,7.20e-26,33;CL:0000031,7.20e-26,33;CL:0000404,7.20e-26,33;CL:0000393,1.44e-21,39;CL:0000211,1.44e-21,39;CL:0002321,2.73e-19,70;CL:0002613,7.91e-15,3;CL:0002611,2.47e-10,2;CL:0002453,1.64e-09,8;CL:0000723,2.09e-09,91;CL:0000048,2.09e-09,91;CL:0000034,1.13e-08,97;CL:0002609,5.78e-08,6;CL:0000333,1.23e-07,10;CL:0000095,1.23e-07,10;CL:0000243,1.23e-07,10;CL:0000123,1.23e-07,10;CL:0000125,1.23e-07,10;CL:0000030,1.23e-07,10;CL:0000339,1.23e-07,10;CL:0002608,2.04e-07,3;CL:0000120,2.19e-07,3;CL:0000128,2.26e-07,6;CL:0000126,2.26e-07,6;CL:0000127,2.26e-07,6;CL:0002610,5.92e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.90e-19!75;UBERON:0001016!6.90e-19!75;UBERON:0001017!1.36e-17!73;UBERON:0005743!1.36e-17!73;UBERON:0004121!4.44e-15!102;UBERON:0000924!4.44e-15!102;UBERON:0006601!4.44e-15!102;UBERON:0001049!2.46e-14!52;UBERON:0005068!2.46e-14!52;UBERON:0006241!2.46e-14!52;UBERON:0007135!2.46e-14!52;UBERON:0002020!1.81e-13!34;UBERON:0002616!5.50e-12!49;UBERON:0000955!1.45e-11!50;UBERON:0006238!1.45e-11!50;UBERON:0002346!3.45e-11!71;UBERON:0003075!3.45e-11!71;UBERON:0007284!3.45e-11!71;UBERON:0003080!3.70e-10!40;UBERON:0000033!4.50e-10!63;UBERON:0002780!1.08e-09!39;UBERON:0001890!1.08e-09!39;UBERON:0006240!1.08e-09!39;UBERON:0002791!3.28e-09!29;UBERON:0003528!3.28e-09!29;UBERON:0001893!3.28e-09!29;UBERON:0003056!4.34e-09!49;UBERON:0007811!1.96e-07!86;UBERON:0000153!3.69e-07!94;UBERON:0002420!5.74e-07!8;UBERON:0007245!5.74e-07!8;UBERON:0010009!5.74e-07!8;UBERON:0010011!5.74e-07!8;UBERON:0000454!5.74e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.15e-18,73;UBERON:0001016,7.74e-18,75;UBERON:0002020,4.00e-15,34;UBERON:0000073,9.33e-15,54;UBERON:0004121,1.52e-13,95;UBERON:0000924,1.52e-13,95;UBERON:0006601,1.52e-13,95;UBERON:0001049,4.07e-11,52;UBERON:0005068,4.07e-11,52;UBERON:0006241,4.07e-11,52;UBERON:0007135,4.07e-11,52;UBERON:0002256,2.47e-10,2;UBERON:0002420,1.48e-09,8;UBERON:0007245,1.48e-09,8;UBERON:0010009,1.48e-09,8;UBERON:0010011,1.48e-09,8;UBERON:0000454,1.48e-09,8;UBERON:0003528,1.65e-09,29;UBERON:0002791,1.65e-09,29;UBERON:0001893,1.65e-09,29;UBERON:0000369,4.18e-09,5;UBERON:0002435,4.18e-09,5;UBERON:0000204,4.18e-09,5;UBERON:0010082,4.18e-09,5;UBERON:0001948,6.92e-09,5;UBERON:0002315,6.92e-09,5;UBERON:0002346,1.12e-08,64;UBERON:0003075,1.12e-08,64;UBERON:0007284,1.12e-08,64;UBERON:0002240,1.75e-07,6;UBERON:0005174,1.75e-07,6;UBERON:0001137,1.75e-07,6;UBERON:0010371,2.25e-07,73;UBERON:0002616,4.75e-07,46;UBERON:0004684,5.92e-07,3;UBERON:0002275,5.92e-07,3;UBERON:0000955,7.13e-07,47;UBERON:0006238,7.13e-07,47;UBERON:0002780,8.27e-07,39;UBERON:0001890,8.27e-07,39;UBERON:0006240,8.27e-07,39 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0.42438965179803,0,0,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0.782391344348039,1.09012578190223,0.878744730937887,1.1665793944457,1.39986421625363,0,0.335565212115473,0,0,0.257259436035947,0.573066879877513,0,0.606949382578793,2.11596391708813,1.26766280701236,0.338844532069132,0,0.899899717281399,0,0,0.599200221036809,1.92109152660777,0.207379224616955,2.16009501330705,0.841299845405528,1.99955689082663,1.10434270475807,0.857435594504678,1.24599112323707,2.75765635983006,1.10115880999389,1.27687338085188,0,1.18697658957174,1.28082701043374,1.56274011167028,1.11673199600552,0.56276261003168,0.916789486660861,0.589257170947335,0.427115042397309,1.1183966749518,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.162137619091711,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0.238744688006273,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0,0,0,0.36630324853453,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr14:70186925..70186927,- | |||
}} |
Revision as of 02:57, 13 September 2013
Short description: | p@chr14:70186925..70186927, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:70186925..70186927, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.34e-38 | 23 |
neuroblast (sensu Vertebrata) | 5.34e-38 | 23 |
neural cell | 6.35e-33 | 43 |
ectodermal cell | 4.02e-32 | 44 |
neurectodermal cell | 4.02e-32 | 44 |
neuron | 7.20e-26 | 33 |
neuronal stem cell | 7.20e-26 | 33 |
neuroblast | 7.20e-26 | 33 |
electrically signaling cell | 7.20e-26 | 33 |
electrically responsive cell | 1.44e-21 | 39 |
electrically active cell | 1.44e-21 | 39 |
embryonic cell | 2.73e-19 | 70 |
striatum neuron | 7.91e-15 | 3 |
neuron of the dorsal spinal cord | 2.47e-10 | 2 |
oligodendrocyte precursor cell | 1.64e-09 | 8 |
somatic stem cell | 2.09e-09 | 91 |
multi fate stem cell | 2.09e-09 | 91 |
stem cell | 1.13e-08 | 97 |
neuron of cerebral cortex | 5.78e-08 | 6 |
migratory neural crest cell | 1.23e-07 | 10 |
neuron associated cell | 1.23e-07 | 10 |
glial cell (sensu Vertebrata) | 1.23e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.23e-07 | 10 |
glial cell | 1.23e-07 | 10 |
glioblast | 1.23e-07 | 10 |
glioblast (sensu Vertebrata) | 1.23e-07 | 10 |
hippocampal neuron | 2.04e-07 | 3 |
granule cell | 2.19e-07 | 3 |
oligodendrocyte | 2.26e-07 | 6 |
macroglial cell | 2.26e-07 | 6 |
astrocyte | 2.26e-07 | 6 |
raphe nuclei neuron | 5.92e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.