FFCP PHASE1:Mm9::chr14:70595804..70595816,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:70595804..70595816,-|id=chr14:70595804..70595816,-|ontology_enrichment_celltype=CL:0002453!1.92e-08!8;CL:0000333!5.47e-07!10;CL:0000095!5.47e-07!10;CL:0000243!5.47e-07!10;CL:0000123!5.47e-07!10;CL:0000125!5.47e-07!10;CL:0000030!5.47e-07!10;CL:0000339!5.47e-07!10;CL:0000128!7.93e-07!6;CL:0000126!7.93e-07!6;CL:0000127!7.93e-07!6|ontology_enrichment_celltype_v019_2=CL:0002453,3.25e-18,8;CL:0000128,2.55e-14,6;CL:0000126,2.55e-14,6;CL:0000127,2.55e-14,6;CL:0000333,3.06e-14,10;CL:0000095,3.06e-14,10;CL:0000243,3.06e-14,10;CL:0000123,3.06e-14,10;CL:0000125,3.06e-14,10;CL:0000030,3.06e-14,10;CL:0000339,3.06e-14,10;CL:0000680,2.19e-13,6;CL:0000187,2.19e-13,6;CL:0000056,2.19e-13,6;CL:0000222,2.37e-11,7;CL:0000355,1.22e-08,9;CL:0000192,1.01e-07,3;CL:0000359,1.01e-07,3;CL:0002539,1.01e-07,3;CL:0000514,1.01e-07,3;CL:0002494,2.85e-07,3;CL:0000737,2.85e-07,3;CL:0000746,2.85e-07,3;CL:0000513,2.85e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.37e-07!17;UBERON:0005181!2.37e-07!17;UBERON:0002224!2.37e-07!17;UBERON:0000915!2.37e-07!17;UBERON:0008947!2.37e-07!17;UBERON:0003258!2.37e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000947,2.04e-09,4;UBERON:0001637,2.04e-09,4;UBERON:0004573,2.04e-09,4;UBERON:0003509,2.04e-09,4;UBERON:0004571,2.04e-09,4;UBERON:0010191,2.04e-09,4;UBERON:0004572,2.04e-09,4;UBERON:0001134,1.22e-08,9;UBERON:0002036,1.22e-08,9;UBERON:0002385,1.22e-08,9;UBERON:0000486,1.22e-08,9;UBERON:0007503,1.22e-08,9;UBERON:0001015,1.22e-08,9;UBERON:0002329,1.22e-08,9;UBERON:0003082,1.22e-08,9;UBERON:0003059,1.22e-08,9;UBERON:0007282,1.22e-08,9;UBERON:0004290,1.22e-08,9;UBERON:0009618,1.22e-08,9;UBERON:0005178,2.31e-08,17;UBERON:0005181,2.31e-08,17;UBERON:0002224,2.31e-08,17;UBERON:0000915,2.31e-08,17;UBERON:0008947,2.31e-08,17;UBERON:0003258,2.31e-08,17;UBERON:0001135,1.01e-07,3;UBERON:0004237,1.01e-07,3;UBERON:0004695,1.01e-07,3;UBERON:0002111,1.01e-07,3;UBERON:0004178,1.01e-07,3;UBERON:0000383,1.09e-07,10;UBERON:0000055,1.64e-07,5;UBERON:0007500,1.64e-07,5;UBERON:0001981,1.64e-07,5;UBERON:0002049,1.64e-07,5;UBERON:0007798,1.64e-07,5;UBERON:0004537,1.64e-07,5;UBERON:0006965,1.64e-07,5;UBERON:0005631,5.08e-07,3;UBERON:0000478,5.08e-07,3;UBERON:0000158,5.08e-07,3;UBERON:0007524,6.48e-07,11;UBERON:0003077,6.48e-07,11;UBERON:0007285,6.48e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6183799727762,12.0638548151222,3.85448179539531,5.47673941043627,10.4652075062614,41.9600609022841,41.6079984018967,8.25919887589639,10.062679505548,0,0,0,4.63066984864705,2.29226751951005,8.76642556871652,0,0,0,1.35537812827653,2.66788438833342,0,0,0,4.19440154725767,7.68436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,4.4311883870295,1.55871602761721,2.82671659608272,0,0,5.09610479413291,0,1.5154372870785,0.760079596425296,1.01104889002957,0.5709193985953,0,0.148442139064825,0,0,0,0.301445281105245,0.470354828542819,0.125666591329675,1.97755974187499,2.31358971071859,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,1.32391173005411,0.248813941220186,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.536825675041487,0,0.205809224758569,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.280543279561274,0.126473074248515,0.295220295959204,0.156998727841375,0,0.592905254174298,0,0,0,0,0,0.50925170356284,0,0,0,0,0.372140947668503,0,0,0,0,8.31389355749721,0,0,0,0.234690248288502,1.17254380209271,4.04674189506223,10.9274842800367,0.788175720530955,0.8858587585951,0.318909537314974,3.93271955317771,1.72684981865896,5.20736610893442,0,0,0,0,0,0,3.93443868904021,0,0,0,0,0.238968797952552,0,0,0,0,0.790575555893047,0,0.283880170416537,0.890328018336276,1.46598263418218,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0.885905678642318,0.307435147943927,1.80899805217755,0,0.356497378384721,0.632073515871632,0,0,1.02131881726136,0,0,0,0,0,0.164549020602121,0,4.69343416127421,4.02480934641258,0.220528398054962,0.98931751764888,0,0.482503399425247,1.07435109602823,0.656563598980245,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.539457385539283,0.247960367176008,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0.352071715937262,0.13020438484395,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0.233753804363138,0,0,0.358855426437903,1.34307693091263,1.15913756419314,1.87682475451182,0.36630324853453,0.214368379079066,0.50157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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:70595804..70595816,- | |||
|id=chr14:70595804..70595816,- | |||
|ontology_enrichment_celltype=CL:0002453!1.92e-08!8;CL:0000333!5.47e-07!10;CL:0000095!5.47e-07!10;CL:0000243!5.47e-07!10;CL:0000123!5.47e-07!10;CL:0000125!5.47e-07!10;CL:0000030!5.47e-07!10;CL:0000339!5.47e-07!10;CL:0000128!7.93e-07!6;CL:0000126!7.93e-07!6;CL:0000127!7.93e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.25e-18,8;CL:0000128,2.55e-14,6;CL:0000126,2.55e-14,6;CL:0000127,2.55e-14,6;CL:0000333,3.06e-14,10;CL:0000095,3.06e-14,10;CL:0000243,3.06e-14,10;CL:0000123,3.06e-14,10;CL:0000125,3.06e-14,10;CL:0000030,3.06e-14,10;CL:0000339,3.06e-14,10;CL:0000680,2.19e-13,6;CL:0000187,2.19e-13,6;CL:0000056,2.19e-13,6;CL:0000222,2.37e-11,7;CL:0000355,1.22e-08,9;CL:0000192,1.01e-07,3;CL:0000359,1.01e-07,3;CL:0002539,1.01e-07,3;CL:0000514,1.01e-07,3;CL:0002494,2.85e-07,3;CL:0000737,2.85e-07,3;CL:0000746,2.85e-07,3;CL:0000513,2.85e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.37e-07!17;UBERON:0005181!2.37e-07!17;UBERON:0002224!2.37e-07!17;UBERON:0000915!2.37e-07!17;UBERON:0008947!2.37e-07!17;UBERON:0003258!2.37e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,2.04e-09,4;UBERON:0001637,2.04e-09,4;UBERON:0004573,2.04e-09,4;UBERON:0003509,2.04e-09,4;UBERON:0004571,2.04e-09,4;UBERON:0010191,2.04e-09,4;UBERON:0004572,2.04e-09,4;UBERON:0001134,1.22e-08,9;UBERON:0002036,1.22e-08,9;UBERON:0002385,1.22e-08,9;UBERON:0000486,1.22e-08,9;UBERON:0007503,1.22e-08,9;UBERON:0001015,1.22e-08,9;UBERON:0002329,1.22e-08,9;UBERON:0003082,1.22e-08,9;UBERON:0003059,1.22e-08,9;UBERON:0007282,1.22e-08,9;UBERON:0004290,1.22e-08,9;UBERON:0009618,1.22e-08,9;UBERON:0005178,2.31e-08,17;UBERON:0005181,2.31e-08,17;UBERON:0002224,2.31e-08,17;UBERON:0000915,2.31e-08,17;UBERON:0008947,2.31e-08,17;UBERON:0003258,2.31e-08,17;UBERON:0001135,1.01e-07,3;UBERON:0004237,1.01e-07,3;UBERON:0004695,1.01e-07,3;UBERON:0002111,1.01e-07,3;UBERON:0004178,1.01e-07,3;UBERON:0000383,1.09e-07,10;UBERON:0000055,1.64e-07,5;UBERON:0007500,1.64e-07,5;UBERON:0001981,1.64e-07,5;UBERON:0002049,1.64e-07,5;UBERON:0007798,1.64e-07,5;UBERON:0004537,1.64e-07,5;UBERON:0006965,1.64e-07,5;UBERON:0005631,5.08e-07,3;UBERON:0000478,5.08e-07,3;UBERON:0000158,5.08e-07,3;UBERON:0007524,6.48e-07,11;UBERON:0003077,6.48e-07,11;UBERON:0007285,6.48e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6183799727762,12.0638548151222,3.85448179539531,5.47673941043627,10.4652075062614,41.9600609022841,41.6079984018967,8.25919887589639,10.062679505548,0,0,0,4.63066984864705,2.29226751951005,8.76642556871652,0,0,0,1.35537812827653,2.66788438833342,0,0,0,4.19440154725767,7.68436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,4.4311883870295,1.55871602761721,2.82671659608272,0,0,5.09610479413291,0,1.5154372870785,0.760079596425296,1.01104889002957,0.5709193985953,0,0.148442139064825,0,0,0,0.301445281105245,0.470354828542819,0.125666591329675,1.97755974187499,2.31358971071859,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,1.32391173005411,0.248813941220186,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.536825675041487,0,0.205809224758569,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.280543279561274,0.126473074248515,0.295220295959204,0.156998727841375,0,0.592905254174298,0,0,0,0,0,0.50925170356284,0,0,0,0,0.372140947668503,0,0,0,0,8.31389355749721,0,0,0,0.234690248288502,1.17254380209271,4.04674189506223,10.9274842800367,0.788175720530955,0.8858587585951,0.318909537314974,3.93271955317771,1.72684981865896,5.20736610893442,0,0,0,0,0,0,3.93443868904021,0,0,0,0,0.238968797952552,0,0,0,0,0.790575555893047,0,0.283880170416537,0.890328018336276,1.46598263418218,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0.885905678642318,0.307435147943927,1.80899805217755,0,0.356497378384721,0.632073515871632,0,0,1.02131881726136,0,0,0,0,0,0.164549020602121,0,4.69343416127421,4.02480934641258,0.220528398054962,0.98931751764888,0,0.482503399425247,1.07435109602823,0.656563598980245,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.539457385539283,0.247960367176008,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0.352071715937262,0.13020438484395,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0.233753804363138,0,0,0.358855426437903,1.34307693091263,1.15913756419314,1.87682475451182,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.618105171716683,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0,0.423073039458382,0.182927972872773,0,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.701794825336225,0,0.57386499620653,0,0 | |||
|short_description=p@chr14:70595804..70595816,- | |||
}} |
Revision as of 02:58, 13 September 2013
Short description: | p@chr14:70595804..70595816, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:70595804..70595816, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.25e-18 | 8 |
oligodendrocyte | 2.55e-14 | 6 |
macroglial cell | 2.55e-14 | 6 |
astrocyte | 2.55e-14 | 6 |
migratory neural crest cell | 3.06e-14 | 10 |
neuron associated cell | 3.06e-14 | 10 |
glial cell (sensu Vertebrata) | 3.06e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 3.06e-14 | 10 |
glial cell | 3.06e-14 | 10 |
glioblast | 3.06e-14 | 10 |
glioblast (sensu Vertebrata) | 3.06e-14 | 10 |
muscle precursor cell | 2.19e-13 | 6 |
muscle cell | 2.19e-13 | 6 |
myoblast | 2.19e-13 | 6 |
mesodermal cell | 2.37e-11 | 7 |
multi-potent skeletal muscle stem cell | 1.22e-08 | 9 |
smooth muscle cell | 1.01e-07 | 3 |
vascular associated smooth muscle cell | 1.01e-07 | 3 |
aortic smooth muscle cell | 1.01e-07 | 3 |
smooth muscle myoblast | 1.01e-07 | 3 |
cardiocyte | 2.85e-07 | 3 |
striated muscle cell | 2.85e-07 | 3 |
cardiac muscle cell | 2.85e-07 | 3 |
cardiac muscle myoblast | 2.85e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.