FFCP PHASE1:Mm9::chr15:78391895..78391920,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=316|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:78391895..78391920,-|id=chr15:78391895..78391920,-|ontology_enrichment_celltype=CL:0000988!5.94e-18!32;CL:0002032!5.94e-18!32;CL:0000037!5.94e-18!32;CL:0000566!5.94e-18!32;CL:0000837!5.94e-18!32;CL:0002031!2.94e-15!25;CL:0002320!2.95e-12!46;CL:0000134!2.95e-12!46;CL:0000049!2.26e-11!19;CL:0000738!3.67e-10!17;CL:0002087!3.67e-10!17;CL:0000763!6.23e-10!16;CL:0000838!1.06e-08!12;CL:0000219!1.49e-08!54;CL:0000063!1.79e-08!66;CL:0000084!5.55e-08!11;CL:0000827!5.55e-08!11;CL:0000839!7.18e-08!13;CL:0000542!1.13e-07!13;CL:0000051!1.13e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,1.02e-22,32;CL:0002032,1.02e-22,32;CL:0000037,1.02e-22,32;CL:0000837,1.02e-22,32;CL:0002031,7.94e-19,25;CL:0002320,8.11e-19,46;CL:0000134,8.11e-19,46;CL:0000049,4.82e-15,19;CL:0000219,7.19e-15,54;CL:0000763,4.20e-14,16;CL:0000738,1.26e-11,17;CL:0002087,1.26e-11,17;CL:0000839,1.94e-10,13;CL:0000838,1.35e-09,12;CL:0000723,4.97e-09,91;CL:0000048,4.97e-09,91;CL:0000542,1.06e-08,13;CL:0000051,1.06e-08,13;CL:0000034,1.22e-08,97;CL:0000084,2.24e-08,11;CL:0000827,2.24e-08,11;CL:0000557,3.84e-08,7;CL:0000050,1.65e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,3.65e-07,6|ontology_enrichment_uberon=UBERON:0002193!1.05e-25!48;UBERON:0002390!8.96e-24!45;UBERON:0003061!8.96e-24!45;UBERON:0002405!3.14e-22!70;UBERON:0004177!1.63e-12!29;UBERON:0002384!2.95e-12!46;UBERON:0002371!3.33e-12!16;UBERON:0003081!6.25e-12!88;UBERON:0002204!6.27e-12!32;UBERON:0001474!7.54e-12!22;UBERON:0004765!7.54e-12!22;UBERON:0001434!7.54e-12!22;UBERON:0005057!2.39e-10!51;UBERON:0002370!1.46e-09!23;UBERON:0000974!1.46e-09!23;UBERON:0004807!1.46e-09!23;UBERON:0005058!1.46e-09!23;UBERON:0003351!1.46e-09!23;UBERON:0009113!1.46e-09!23;UBERON:0003295!1.46e-09!23;UBERON:0009722!1.46e-09!23;UBERON:0005562!1.46e-09!23;UBERON:0007690!1.46e-09!23;UBERON:0006562!7.58e-09!24;UBERON:0003408!7.58e-09!24;UBERON:0001557!7.58e-09!24;UBERON:0001042!7.58e-09!24;UBERON:0008814!7.58e-09!24;UBERON:0009145!7.58e-09!24;UBERON:0000490!4.32e-07!66;UBERON:0000072!4.62e-07!27;UBERON:0003929!6.56e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.18e-32,48;UBERON:0002405,6.18e-32,48;UBERON:0002390,1.25e-28,45;UBERON:0003061,1.25e-28,45;UBERON:0002384,8.11e-19,46;UBERON:0002371,2.35e-17,16;UBERON:0001474,1.51e-13,22;UBERON:0004765,1.51e-13,22;UBERON:0001434,1.51e-13,22;UBERON:0004177,6.57e-13,29;UBERON:0005057,6.57e-13,29;UBERON:0002204,1.19e-12,32;UBERON:0002370,6.68e-12,23;UBERON:0000974,6.68e-12,23;UBERON:0004807,6.68e-12,23;UBERON:0005058,6.68e-12,23;UBERON:0003351,6.68e-12,23;UBERON:0009113,6.68e-12,23;UBERON:0003295,6.68e-12,23;UBERON:0009722,6.68e-12,23;UBERON:0005562,6.68e-12,23;UBERON:0007690,6.68e-12,23;UBERON:0003081,1.80e-11,87;UBERON:0006562,3.07e-11,24;UBERON:0003408,3.07e-11,24;UBERON:0001557,3.07e-11,24;UBERON:0001042,3.07e-11,24;UBERON:0008814,3.07e-11,24;UBERON:0009145,3.07e-11,24;UBERON:0000077,7.21e-10,35;UBERON:0000072,1.49e-09,27;UBERON:0000926,3.30e-08,120;UBERON:0004120,3.30e-08,120;UBERON:0006603,3.30e-08,120|phase1_expression=0,1.39590163055744,0.454999239389536,0,0,0.33575854382378,0.700837921786577,5.93967287831251,0.985521055061667,1.87251621057595,0.34243593645101,0.398860794976682,2.22560948910567,4.10875891369288,1.66554880907831,1.21485160433896,0.699561878128147,5.0473946457318,2.33094537129756,2.12194825899015,0.255129870453209,2.58156473122302,1.56719873483361,1.11994695955385,1.14704640533585,0,0.430761996159075,1.939241094173,0,0,1.33038306393183,1.90509202037889,3.07532393792285,0,0,0,0,10.0447591376858,4.6880120671428,6.80580867165938,10.5881667845583,10.9287277593351,8.73918635456076,0,0,0,0,0,0,0,0,0,2.68452169692378,4.35217285206807,5.37750078627942,0,0.286533439938757,0.515672092277442,0,0,0,0,0,9.89889689009539,8.89979726310277,7.104801149461,1.79760066311043,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.10725460376606,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,4.42305275974937,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0.510914110417183,1.67741174308288,1.19980546198682,0.635351135365324,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.746441823660558,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0.199034266818493,2.80885274925294,2.31613116403244,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,1.79763881730844,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.296452627087149,1.00107063429656,0,0.899448449539415,0.608580364165509,0.72353147925725,0.50925170356284,0.287696137450811,3.56697498905078,0.823684239564244,1.43768206527355,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0,0,0,0,0.318909537314974,0.163863314715738,0.518054945597687,0.289298117163023,6.03165135757089,11.4220193601929,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,3.41741761595705,0.619160603889667,0.925972636848558,0.565105371014073,1.23024804948923,1.60144721244566,0.509935289981566,0.559805809294632,1.10559979043539,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,2.52808896502543,1.01362607645082,1.23253148597793,2.20865399062252,1.25318686967237,0.993406773906324,1.80293174279953,1.47689527174577,1.51449674922221,1.21930890648,1.31074040677893,1.65678397257579,1.82802499116626,1.5193997283604,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.463735671240843|short_description=p@chr15:78391895..78391920,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=316 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:78391895..78391920,- | |||
|id=chr15:78391895..78391920,- | |||
|ontology_enrichment_celltype=CL:0000988!5.94e-18!32;CL:0002032!5.94e-18!32;CL:0000037!5.94e-18!32;CL:0000566!5.94e-18!32;CL:0000837!5.94e-18!32;CL:0002031!2.94e-15!25;CL:0002320!2.95e-12!46;CL:0000134!2.95e-12!46;CL:0000049!2.26e-11!19;CL:0000738!3.67e-10!17;CL:0002087!3.67e-10!17;CL:0000763!6.23e-10!16;CL:0000838!1.06e-08!12;CL:0000219!1.49e-08!54;CL:0000063!1.79e-08!66;CL:0000084!5.55e-08!11;CL:0000827!5.55e-08!11;CL:0000839!7.18e-08!13;CL:0000542!1.13e-07!13;CL:0000051!1.13e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.02e-22,32;CL:0002032,1.02e-22,32;CL:0000037,1.02e-22,32;CL:0000837,1.02e-22,32;CL:0002031,7.94e-19,25;CL:0002320,8.11e-19,46;CL:0000134,8.11e-19,46;CL:0000049,4.82e-15,19;CL:0000219,7.19e-15,54;CL:0000763,4.20e-14,16;CL:0000738,1.26e-11,17;CL:0002087,1.26e-11,17;CL:0000839,1.94e-10,13;CL:0000838,1.35e-09,12;CL:0000723,4.97e-09,91;CL:0000048,4.97e-09,91;CL:0000542,1.06e-08,13;CL:0000051,1.06e-08,13;CL:0000034,1.22e-08,97;CL:0000084,2.24e-08,11;CL:0000827,2.24e-08,11;CL:0000557,3.84e-08,7;CL:0000050,1.65e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.65e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.05e-25!48;UBERON:0002390!8.96e-24!45;UBERON:0003061!8.96e-24!45;UBERON:0002405!3.14e-22!70;UBERON:0004177!1.63e-12!29;UBERON:0002384!2.95e-12!46;UBERON:0002371!3.33e-12!16;UBERON:0003081!6.25e-12!88;UBERON:0002204!6.27e-12!32;UBERON:0001474!7.54e-12!22;UBERON:0004765!7.54e-12!22;UBERON:0001434!7.54e-12!22;UBERON:0005057!2.39e-10!51;UBERON:0002370!1.46e-09!23;UBERON:0000974!1.46e-09!23;UBERON:0004807!1.46e-09!23;UBERON:0005058!1.46e-09!23;UBERON:0003351!1.46e-09!23;UBERON:0009113!1.46e-09!23;UBERON:0003295!1.46e-09!23;UBERON:0009722!1.46e-09!23;UBERON:0005562!1.46e-09!23;UBERON:0007690!1.46e-09!23;UBERON:0006562!7.58e-09!24;UBERON:0003408!7.58e-09!24;UBERON:0001557!7.58e-09!24;UBERON:0001042!7.58e-09!24;UBERON:0008814!7.58e-09!24;UBERON:0009145!7.58e-09!24;UBERON:0000490!4.32e-07!66;UBERON:0000072!4.62e-07!27;UBERON:0003929!6.56e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.18e-32,48;UBERON:0002405,6.18e-32,48;UBERON:0002390,1.25e-28,45;UBERON:0003061,1.25e-28,45;UBERON:0002384,8.11e-19,46;UBERON:0002371,2.35e-17,16;UBERON:0001474,1.51e-13,22;UBERON:0004765,1.51e-13,22;UBERON:0001434,1.51e-13,22;UBERON:0004177,6.57e-13,29;UBERON:0005057,6.57e-13,29;UBERON:0002204,1.19e-12,32;UBERON:0002370,6.68e-12,23;UBERON:0000974,6.68e-12,23;UBERON:0004807,6.68e-12,23;UBERON:0005058,6.68e-12,23;UBERON:0003351,6.68e-12,23;UBERON:0009113,6.68e-12,23;UBERON:0003295,6.68e-12,23;UBERON:0009722,6.68e-12,23;UBERON:0005562,6.68e-12,23;UBERON:0007690,6.68e-12,23;UBERON:0003081,1.80e-11,87;UBERON:0006562,3.07e-11,24;UBERON:0003408,3.07e-11,24;UBERON:0001557,3.07e-11,24;UBERON:0001042,3.07e-11,24;UBERON:0008814,3.07e-11,24;UBERON:0009145,3.07e-11,24;UBERON:0000077,7.21e-10,35;UBERON:0000072,1.49e-09,27;UBERON:0000926,3.30e-08,120;UBERON:0004120,3.30e-08,120;UBERON:0006603,3.30e-08,120 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,0,0,0.33575854382378,0.700837921786577,5.93967287831251,0.985521055061667,1.87251621057595,0.34243593645101,0.398860794976682,2.22560948910567,4.10875891369288,1.66554880907831,1.21485160433896,0.699561878128147,5.0473946457318,2.33094537129756,2.12194825899015,0.255129870453209,2.58156473122302,1.56719873483361,1.11994695955385,1.14704640533585,0,0.430761996159075,1.939241094173,0,0,1.33038306393183,1.90509202037889,3.07532393792285,0,0,0,0,10.0447591376858,4.6880120671428,6.80580867165938,10.5881667845583,10.9287277593351,8.73918635456076,0,0,0,0,0,0,0,0,0,2.68452169692378,4.35217285206807,5.37750078627942,0,0.286533439938757,0.515672092277442,0,0,0,0,0,9.89889689009539,8.89979726310277,7.104801149461,1.79760066311043,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.10725460376606,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,4.42305275974937,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0.510914110417183,1.67741174308288,1.19980546198682,0.635351135365324,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.746441823660558,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0.199034266818493,2.80885274925294,2.31613116403244,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,1.79763881730844,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.296452627087149,1.00107063429656,0,0.899448449539415,0.608580364165509,0.72353147925725,0.50925170356284,0.287696137450811,3.56697498905078,0.823684239564244,1.43768206527355,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0,0,0,0,0.318909537314974,0.163863314715738,0.518054945597687,0.289298117163023,6.03165135757089,11.4220193601929,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,3.41741761595705,0.619160603889667,0.925972636848558,0.565105371014073,1.23024804948923,1.60144721244566,0.509935289981566,0.559805809294632,1.10559979043539,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,2.52808896502543,1.01362607645082,1.23253148597793,2.20865399062252,1.25318686967237,0.993406773906324,1.80293174279953,1.47689527174577,1.51449674922221,1.21930890648,1.31074040677893,1.65678397257579,1.82802499116626,1.5193997283604,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.463735671240843 | |||
|short_description=p@chr15:78391895..78391920,- | |||
}} |
Revision as of 11:06, 13 September 2013
Short description: | p@chr15:78391895..78391920, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78391895..78391920, - |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.02e-22 | 32 |
hematopoietic oligopotent progenitor cell | 1.02e-22 | 32 |
hematopoietic stem cell | 1.02e-22 | 32 |
hematopoietic multipotent progenitor cell | 1.02e-22 | 32 |
hematopoietic lineage restricted progenitor cell | 7.94e-19 | 25 |
connective tissue cell | 8.11e-19 | 46 |
mesenchymal cell | 8.11e-19 | 46 |
common myeloid progenitor | 4.82e-15 | 19 |
motile cell | 7.19e-15 | 54 |
myeloid cell | 4.20e-14 | 16 |
leukocyte | 1.26e-11 | 17 |
nongranular leukocyte | 1.26e-11 | 17 |
myeloid lineage restricted progenitor cell | 1.94e-10 | 13 |
lymphoid lineage restricted progenitor cell | 1.35e-09 | 12 |
somatic stem cell | 4.97e-09 | 91 |
multi fate stem cell | 4.97e-09 | 91 |
lymphocyte | 1.06e-08 | 13 |
common lymphoid progenitor | 1.06e-08 | 13 |
stem cell | 1.22e-08 | 97 |
T cell | 2.24e-08 | 11 |
pro-T cell | 2.24e-08 | 11 |
granulocyte monocyte progenitor cell | 3.84e-08 | 7 |
megakaryocyte-erythroid progenitor cell | 1.65e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.65e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.