FFCP PHASE1:Mm9::chr15:78396374..78396387,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=316|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:78396374..78396387,-|id=chr15:78396374..78396387,-|ontology_enrichment_celltype=CL:0000988!8.40e-24!32;CL:0002032!8.40e-24!32;CL:0000037!8.40e-24!32;CL:0000566!8.40e-24!32;CL:0000837!8.40e-24!32;CL:0002031!6.21e-20!25;CL:0002320!3.99e-18!46;CL:0000134!3.99e-18!46;CL:0000049!2.61e-16!19;CL:0000063!3.37e-15!66;CL:0000763!4.71e-14!16;CL:0000219!8.26e-14!54;CL:0000738!9.12e-13!17;CL:0002087!9.12e-13!17;CL:0000839!1.37e-11!13;CL:0000838!1.49e-09!12;CL:0000791!4.98e-09!9;CL:0000789!4.98e-09!9;CL:0002420!4.98e-09!9;CL:0002419!4.98e-09!9;CL:0000790!4.98e-09!9;CL:0000084!1.11e-08!11;CL:0000827!1.11e-08!11;CL:0000542!1.43e-08!13;CL:0000051!1.43e-08!13;CL:0000557!2.43e-08!7;CL:0000624!5.40e-08!8;CL:0000034!5.94e-08!97;CL:0000144!2.58e-07!121;CL:0000012!2.58e-07!121;CL:0000050!2.67e-07!9;CL:0000723!2.91e-07!91;CL:0000048!2.91e-07!91|ontology_enrichment_celltype_v019_2=CL:0002031,4.10e-25,25;CL:0000988,2.90e-21,32;CL:0002032,2.90e-21,32;CL:0000037,2.90e-21,32;CL:0000837,2.90e-21,32;CL:0002320,3.32e-20,46;CL:0000134,3.32e-20,46;CL:0000839,1.53e-19,13;CL:0000763,1.38e-18,16;CL:0000219,1.50e-16,54;CL:0000049,2.62e-15,19;CL:0000738,4.25e-15,17;CL:0002087,4.25e-15,17;CL:0000473,5.56e-14,7;CL:0002194,3.70e-12,4;CL:0000766,3.70e-12,4;CL:0000234,3.70e-12,4;CL:0000576,3.70e-12,4;CL:0000235,3.70e-12,4;CL:0000864,3.70e-12,4;CL:0002009,3.70e-12,4;CL:0000040,3.70e-12,4;CL:0000559,3.70e-12,4;CL:0000723,1.39e-11,91;CL:0000048,1.39e-11,91;CL:0000034,1.48e-10,97;CL:0002092,4.16e-10,3;CL:0002540,4.16e-10,3;CL:0000050,4.68e-10,9;CL:0000557,5.19e-10,7;CL:0000838,7.03e-08,12;CL:0000791,8.22e-08,9;CL:0000789,8.22e-08,9;CL:0002420,8.22e-08,9;CL:0002419,8.22e-08,9;CL:0000790,8.22e-08,9;CL:0002476,3.01e-07,2;CL:0000542,3.19e-07,13;CL:0000051,3.19e-07,13;CL:0000553,4.04e-07,6;CL:0000556,4.04e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,9.31e-12,6;DOID:0060100,1.89e-09,3;DOID:4045,1.89e-09,3|ontology_enrichment_uberon=UBERON:0002193!2.54e-28!48;UBERON:0002390!2.02e-25!45;UBERON:0003061!2.02e-25!45;UBERON:0002405!2.31e-20!70;UBERON:0002384!3.99e-18!46;UBERON:0002371!6.73e-17!16;UBERON:0001474!2.00e-12!22;UBERON:0004765!2.00e-12!22;UBERON:0001434!2.00e-12!22;UBERON:0002370!4.99e-12!23;UBERON:0000974!4.99e-12!23;UBERON:0004807!4.99e-12!23;UBERON:0005058!4.99e-12!23;UBERON:0003351!4.99e-12!23;UBERON:0009113!4.99e-12!23;UBERON:0003295!4.99e-12!23;UBERON:0009722!4.99e-12!23;UBERON:0005562!4.99e-12!23;UBERON:0007690!4.99e-12!23;UBERON:0006562!2.79e-11!24;UBERON:0003408!2.79e-11!24;UBERON:0001557!2.79e-11!24;UBERON:0001042!2.79e-11!24;UBERON:0008814!2.79e-11!24;UBERON:0009145!2.79e-11!24;UBERON:0004177!1.05e-10!29;UBERON:0002204!1.37e-10!32;UBERON:0000072!2.18e-09!27;UBERON:0003081!2.52e-09!88|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.24e-23,16;UBERON:0002384,3.32e-20,46;UBERON:0002204,2.56e-19,32;UBERON:0001474,5.19e-19,22;UBERON:0004765,5.19e-19,22;UBERON:0001434,5.19e-19,22;UBERON:0002193,1.79e-11,48;UBERON:0002405,1.79e-11,48;UBERON:0002390,2.26e-09,45;UBERON:0003061,2.26e-09,45|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,1.40167584357315,3.87369970324729,0.422366166455,0.70219357896598,0.513653904676515,0.0797721589953364,2.73921167889929,2.53519167015092,0.333109761815663,0.607425802169478,1.39912375625629,2.05050407482854,2.4680598049033,1.69755860719212,0.0850432901510698,0.794327609607082,0,0.799962113967033,1.60586496747019,0.57423196411502,1.29228598847722,1.72376986148711,0,0,0.221730510655305,2.54012269383853,1.84519436275371,0,0,0,0,6.69650609179052,3.1253413780952,2.61761871986899,1.17646297606203,4.09827290975067,5.34061388334269,0,0,0,0,0,0,0,0,0,1.34226084846189,4.35217285206807,2.68875039313971,0,0,0,0,0,0,0,0,6.29929802096979,9.88866362566974,11.3676818391376,2.09720077362883,3.07374644257244,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,0,0,0,0,0.838705871541442,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,2.87536413054709,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53956419696361,8.15858525728064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0.619160603889667,0,0,0,0,0.679913719975421,0.69975726161829,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.608175645870493,0.205421914329655,0.389762468933385,0.179026695667481,0.993406773906324,0.721172697119813,0.886137163047463,0.100966449948148,0.381034033274999,0.403304740547362,0.682205165178267,0.673482891482306,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0|short_description=p@chr15:78396374..78396387,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=316 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:78396374..78396387,- | |||
|id=chr15:78396374..78396387,- | |||
|ontology_enrichment_celltype=CL:0000988!8.40e-24!32;CL:0002032!8.40e-24!32;CL:0000037!8.40e-24!32;CL:0000566!8.40e-24!32;CL:0000837!8.40e-24!32;CL:0002031!6.21e-20!25;CL:0002320!3.99e-18!46;CL:0000134!3.99e-18!46;CL:0000049!2.61e-16!19;CL:0000063!3.37e-15!66;CL:0000763!4.71e-14!16;CL:0000219!8.26e-14!54;CL:0000738!9.12e-13!17;CL:0002087!9.12e-13!17;CL:0000839!1.37e-11!13;CL:0000838!1.49e-09!12;CL:0000791!4.98e-09!9;CL:0000789!4.98e-09!9;CL:0002420!4.98e-09!9;CL:0002419!4.98e-09!9;CL:0000790!4.98e-09!9;CL:0000084!1.11e-08!11;CL:0000827!1.11e-08!11;CL:0000542!1.43e-08!13;CL:0000051!1.43e-08!13;CL:0000557!2.43e-08!7;CL:0000624!5.40e-08!8;CL:0000034!5.94e-08!97;CL:0000144!2.58e-07!121;CL:0000012!2.58e-07!121;CL:0000050!2.67e-07!9;CL:0000723!2.91e-07!91;CL:0000048!2.91e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.10e-25,25;CL:0000988,2.90e-21,32;CL:0002032,2.90e-21,32;CL:0000037,2.90e-21,32;CL:0000837,2.90e-21,32;CL:0002320,3.32e-20,46;CL:0000134,3.32e-20,46;CL:0000839,1.53e-19,13;CL:0000763,1.38e-18,16;CL:0000219,1.50e-16,54;CL:0000049,2.62e-15,19;CL:0000738,4.25e-15,17;CL:0002087,4.25e-15,17;CL:0000473,5.56e-14,7;CL:0002194,3.70e-12,4;CL:0000766,3.70e-12,4;CL:0000234,3.70e-12,4;CL:0000576,3.70e-12,4;CL:0000235,3.70e-12,4;CL:0000864,3.70e-12,4;CL:0002009,3.70e-12,4;CL:0000040,3.70e-12,4;CL:0000559,3.70e-12,4;CL:0000723,1.39e-11,91;CL:0000048,1.39e-11,91;CL:0000034,1.48e-10,97;CL:0002092,4.16e-10,3;CL:0002540,4.16e-10,3;CL:0000050,4.68e-10,9;CL:0000557,5.19e-10,7;CL:0000838,7.03e-08,12;CL:0000791,8.22e-08,9;CL:0000789,8.22e-08,9;CL:0002420,8.22e-08,9;CL:0002419,8.22e-08,9;CL:0000790,8.22e-08,9;CL:0002476,3.01e-07,2;CL:0000542,3.19e-07,13;CL:0000051,3.19e-07,13;CL:0000553,4.04e-07,6;CL:0000556,4.04e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,9.31e-12,6;DOID:0060100,1.89e-09,3;DOID:4045,1.89e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.54e-28!48;UBERON:0002390!2.02e-25!45;UBERON:0003061!2.02e-25!45;UBERON:0002405!2.31e-20!70;UBERON:0002384!3.99e-18!46;UBERON:0002371!6.73e-17!16;UBERON:0001474!2.00e-12!22;UBERON:0004765!2.00e-12!22;UBERON:0001434!2.00e-12!22;UBERON:0002370!4.99e-12!23;UBERON:0000974!4.99e-12!23;UBERON:0004807!4.99e-12!23;UBERON:0005058!4.99e-12!23;UBERON:0003351!4.99e-12!23;UBERON:0009113!4.99e-12!23;UBERON:0003295!4.99e-12!23;UBERON:0009722!4.99e-12!23;UBERON:0005562!4.99e-12!23;UBERON:0007690!4.99e-12!23;UBERON:0006562!2.79e-11!24;UBERON:0003408!2.79e-11!24;UBERON:0001557!2.79e-11!24;UBERON:0001042!2.79e-11!24;UBERON:0008814!2.79e-11!24;UBERON:0009145!2.79e-11!24;UBERON:0004177!1.05e-10!29;UBERON:0002204!1.37e-10!32;UBERON:0000072!2.18e-09!27;UBERON:0003081!2.52e-09!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.24e-23,16;UBERON:0002384,3.32e-20,46;UBERON:0002204,2.56e-19,32;UBERON:0001474,5.19e-19,22;UBERON:0004765,5.19e-19,22;UBERON:0001434,5.19e-19,22;UBERON:0002193,1.79e-11,48;UBERON:0002405,1.79e-11,48;UBERON:0002390,2.26e-09,45;UBERON:0003061,2.26e-09,45 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,1.40167584357315,3.87369970324729,0.422366166455,0.70219357896598,0.513653904676515,0.0797721589953364,2.73921167889929,2.53519167015092,0.333109761815663,0.607425802169478,1.39912375625629,2.05050407482854,2.4680598049033,1.69755860719212,0.0850432901510698,0.794327609607082,0,0.799962113967033,1.60586496747019,0.57423196411502,1.29228598847722,1.72376986148711,0,0,0.221730510655305,2.54012269383853,1.84519436275371,0,0,0,0,6.69650609179052,3.1253413780952,2.61761871986899,1.17646297606203,4.09827290975067,5.34061388334269,0,0,0,0,0,0,0,0,0,1.34226084846189,4.35217285206807,2.68875039313971,0,0,0,0,0,0,0,0,6.29929802096979,9.88866362566974,11.3676818391376,2.09720077362883,3.07374644257244,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,0,0,0,0,0.838705871541442,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,2.87536413054709,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53956419696361,8.15858525728064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0.619160603889667,0,0,0,0,0.679913719975421,0.69975726161829,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.608175645870493,0.205421914329655,0.389762468933385,0.179026695667481,0.993406773906324,0.721172697119813,0.886137163047463,0.100966449948148,0.381034033274999,0.403304740547362,0.682205165178267,0.673482891482306,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr15:78396374..78396387,- | |||
}} |
Revision as of 11:06, 13 September 2013
Short description: | p@chr15:78396374..78396387, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78396374..78396387, - |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.24e-23 | 16 |
connective tissue | 3.32e-20 | 46 |
musculoskeletal system | 2.56e-19 | 32 |
bone element | 5.19e-19 | 22 |
skeletal element | 5.19e-19 | 22 |
skeletal system | 5.19e-19 | 22 |
hemolymphoid system | 1.79e-11 | 48 |
immune system | 1.79e-11 | 48 |
hematopoietic system | 2.26e-09 | 45 |
blood island | 2.26e-09 | 45 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 9.31e-12 | 6 |
musculoskeletal system cancer | 1.89e-09 | 3 |
muscle cancer | 1.89e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.