FFCP PHASE1:Mm9::chr15:88808353..88808379,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:88808353..88808379,-|id=chr15:88808353..88808379,-|ontology_enrichment_celltype=CL:0000117!1.01e-16!23;CL:0000337!1.01e-16!23;CL:0002319!1.85e-16!43;CL:0000221!6.53e-16!44;CL:0000133!6.53e-16!44;CL:0000055!4.23e-13!50;CL:0002453!1.71e-10!8;CL:0000540!4.26e-10!33;CL:0000047!4.26e-10!33;CL:0000031!4.26e-10!33;CL:0000404!4.26e-10!33;CL:0002609!8.93e-09!6;CL:0000333!4.65e-08!10;CL:0000095!4.65e-08!10;CL:0000243!4.65e-08!10;CL:0000123!4.65e-08!10;CL:0000125!4.65e-08!10;CL:0000030!4.65e-08!10;CL:0000339!4.65e-08!10;CL:0000393!8.34e-08!39;CL:0000211!8.34e-08!39;CL:0000128!1.75e-07!6;CL:0000126!1.75e-07!6;CL:0000127!1.75e-07!6;CL:0002321!2.36e-07!70;CL:0000220!2.36e-07!70|ontology_enrichment_celltype_v019_2=CL:0002453,3.24e-31,8;CL:0000333,7.50e-25,10;CL:0000095,7.50e-25,10;CL:0000243,7.50e-25,10;CL:0000123,7.50e-25,10;CL:0000125,7.50e-25,10;CL:0000030,7.50e-25,10;CL:0000339,7.50e-25,10;CL:0000128,1.62e-21,6;CL:0000126,1.62e-21,6;CL:0000127,1.62e-21,6;CL:0002319,6.63e-21,43;CL:0000221,2.20e-20,44;CL:0000133,2.20e-20,44;CL:0002608,4.00e-15,3;CL:0002321,4.79e-12,70;CL:0000878,1.54e-11,2;CL:0000129,1.54e-11,2;CL:0002605,1.73e-11,2;CL:0002604,1.73e-11,2;CL:0002611,4.91e-11,2;CL:0000117,1.12e-09,23;CL:0000337,1.12e-09,23;CL:0002609,7.92e-08,6;CL:0002614,3.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.33e-37!73;UBERON:0005743!2.33e-37!73;UBERON:0001049!4.69e-37!52;UBERON:0005068!4.69e-37!52;UBERON:0006241!4.69e-37!52;UBERON:0007135!4.69e-37!52;UBERON:0002020!4.71e-36!34;UBERON:0000073!5.36e-36!75;UBERON:0001016!5.36e-36!75;UBERON:0000955!4.10e-34!50;UBERON:0006238!4.10e-34!50;UBERON:0002616!7.26e-33!49;UBERON:0002791!3.57e-32!29;UBERON:0003528!3.57e-32!29;UBERON:0001893!3.57e-32!29;UBERON:0003080!1.75e-26!40;UBERON:0000033!2.26e-26!63;UBERON:0002346!1.69e-25!71;UBERON:0003075!1.69e-25!71;UBERON:0007284!1.69e-25!71;UBERON:0002780!1.72e-25!39;UBERON:0001890!1.72e-25!39;UBERON:0006240!1.72e-25!39;UBERON:0000956!2.37e-24!21;UBERON:0001869!2.37e-24!21;UBERON:0000203!2.37e-24!21;UBERON:0004121!3.46e-24!102;UBERON:0000924!3.46e-24!102;UBERON:0006601!3.46e-24!102;UBERON:0003056!1.45e-21!49;UBERON:0002619!8.93e-20!17;UBERON:0007811!2.68e-16!86;UBERON:0000153!5.59e-14!94;UBERON:0000025!3.03e-12!114;UBERON:0001954!3.07e-11!7;UBERON:0003022!3.07e-11!7;UBERON:0002421!3.07e-11!7;UBERON:0000349!3.07e-11!7;UBERON:0002600!3.07e-11!7;UBERON:0004111!1.07e-10!122;UBERON:0003076!1.24e-10!12;UBERON:0003057!1.24e-10!12;UBERON:0002021!3.57e-10!10;UBERON:0000411!3.57e-10!10;UBERON:0001950!3.57e-10!10;UBERON:0000064!3.76e-09!99;UBERON:0002420!8.71e-09!8;UBERON:0007245!8.71e-09!8;UBERON:0010009!8.71e-09!8;UBERON:0010011!8.71e-09!8;UBERON:0000454!8.71e-09!8;UBERON:0002298!1.27e-08!6;UBERON:0000477!9.76e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.62e-22,34;UBERON:0001017,9.22e-20,73;UBERON:0001016,3.57e-19,75;UBERON:0003528,1.25e-18,29;UBERON:0002791,1.25e-18,29;UBERON:0001893,1.25e-18,29;UBERON:0001954,8.47e-18,7;UBERON:0003022,8.47e-18,7;UBERON:0002421,8.47e-18,7;UBERON:0000349,8.47e-18,7;UBERON:0002600,8.47e-18,7;UBERON:0001049,1.84e-16,52;UBERON:0005068,1.84e-16,52;UBERON:0006241,1.84e-16,52;UBERON:0007135,1.84e-16,52;UBERON:0000073,8.89e-16,54;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0000956,6.12e-14,21;UBERON:0001869,6.12e-14,21;UBERON:0000203,6.12e-14,21;UBERON:0002616,1.54e-13,46;UBERON:0002619,1.73e-13,17;UBERON:0002780,1.86e-13,39;UBERON:0001890,1.86e-13,39;UBERON:0006240,1.86e-13,39;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0003080,4.41e-13,40;UBERON:0002346,5.44e-13,64;UBERON:0003075,5.44e-13,64;UBERON:0007284,5.44e-13,64;UBERON:0010371,3.94e-11,73;UBERON:0002256,4.91e-11,2;UBERON:0003056,2.18e-10,49;UBERON:0010314,2.17e-08,92;UBERON:0002038,3.46e-07,3;UBERON:0009663,3.46e-07,3;UBERON:0009661,3.46e-07,3;UBERON:0000125,3.46e-07,3;UBERON:0002308,3.46e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.59310688073965,9.22681967484782,7.77719596297134,3.3596741190087,5.75010257459886,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,6.2916023208865,16.5213871288268,0.414758449233911,0.810035629990144,0.210324961351382,5.99867067247988,2.87129103237098,1.46988959057945,2.01275489138296,3.67687514644008,0,0.510749352340751,0.307213066512487,0.131886287730194,0.823388792421687,0,0.837548997004143,1.12552522006336,2.13917546887534,0.294628585473668,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.299581278809645,2.28750301409313,0.879580464790051,1.39059456153821,0.255715457330331,0.83115217823824,0.162241263067758,0,0,0,0,0,0,0,0,0,0.512454881139399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,0.171853182343688,0,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0.818462086339379,0.309873682371932,0,0.249810577937946,0,0,0,0,0|short_description=p@chr15:88808353..88808379,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:88808353..88808379,- | |||
|id=chr15:88808353..88808379,- | |||
|ontology_enrichment_celltype=CL:0000117!1.01e-16!23;CL:0000337!1.01e-16!23;CL:0002319!1.85e-16!43;CL:0000221!6.53e-16!44;CL:0000133!6.53e-16!44;CL:0000055!4.23e-13!50;CL:0002453!1.71e-10!8;CL:0000540!4.26e-10!33;CL:0000047!4.26e-10!33;CL:0000031!4.26e-10!33;CL:0000404!4.26e-10!33;CL:0002609!8.93e-09!6;CL:0000333!4.65e-08!10;CL:0000095!4.65e-08!10;CL:0000243!4.65e-08!10;CL:0000123!4.65e-08!10;CL:0000125!4.65e-08!10;CL:0000030!4.65e-08!10;CL:0000339!4.65e-08!10;CL:0000393!8.34e-08!39;CL:0000211!8.34e-08!39;CL:0000128!1.75e-07!6;CL:0000126!1.75e-07!6;CL:0000127!1.75e-07!6;CL:0002321!2.36e-07!70;CL:0000220!2.36e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.24e-31,8;CL:0000333,7.50e-25,10;CL:0000095,7.50e-25,10;CL:0000243,7.50e-25,10;CL:0000123,7.50e-25,10;CL:0000125,7.50e-25,10;CL:0000030,7.50e-25,10;CL:0000339,7.50e-25,10;CL:0000128,1.62e-21,6;CL:0000126,1.62e-21,6;CL:0000127,1.62e-21,6;CL:0002319,6.63e-21,43;CL:0000221,2.20e-20,44;CL:0000133,2.20e-20,44;CL:0002608,4.00e-15,3;CL:0002321,4.79e-12,70;CL:0000878,1.54e-11,2;CL:0000129,1.54e-11,2;CL:0002605,1.73e-11,2;CL:0002604,1.73e-11,2;CL:0002611,4.91e-11,2;CL:0000117,1.12e-09,23;CL:0000337,1.12e-09,23;CL:0002609,7.92e-08,6;CL:0002614,3.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.33e-37!73;UBERON:0005743!2.33e-37!73;UBERON:0001049!4.69e-37!52;UBERON:0005068!4.69e-37!52;UBERON:0006241!4.69e-37!52;UBERON:0007135!4.69e-37!52;UBERON:0002020!4.71e-36!34;UBERON:0000073!5.36e-36!75;UBERON:0001016!5.36e-36!75;UBERON:0000955!4.10e-34!50;UBERON:0006238!4.10e-34!50;UBERON:0002616!7.26e-33!49;UBERON:0002791!3.57e-32!29;UBERON:0003528!3.57e-32!29;UBERON:0001893!3.57e-32!29;UBERON:0003080!1.75e-26!40;UBERON:0000033!2.26e-26!63;UBERON:0002346!1.69e-25!71;UBERON:0003075!1.69e-25!71;UBERON:0007284!1.69e-25!71;UBERON:0002780!1.72e-25!39;UBERON:0001890!1.72e-25!39;UBERON:0006240!1.72e-25!39;UBERON:0000956!2.37e-24!21;UBERON:0001869!2.37e-24!21;UBERON:0000203!2.37e-24!21;UBERON:0004121!3.46e-24!102;UBERON:0000924!3.46e-24!102;UBERON:0006601!3.46e-24!102;UBERON:0003056!1.45e-21!49;UBERON:0002619!8.93e-20!17;UBERON:0007811!2.68e-16!86;UBERON:0000153!5.59e-14!94;UBERON:0000025!3.03e-12!114;UBERON:0001954!3.07e-11!7;UBERON:0003022!3.07e-11!7;UBERON:0002421!3.07e-11!7;UBERON:0000349!3.07e-11!7;UBERON:0002600!3.07e-11!7;UBERON:0004111!1.07e-10!122;UBERON:0003076!1.24e-10!12;UBERON:0003057!1.24e-10!12;UBERON:0002021!3.57e-10!10;UBERON:0000411!3.57e-10!10;UBERON:0001950!3.57e-10!10;UBERON:0000064!3.76e-09!99;UBERON:0002420!8.71e-09!8;UBERON:0007245!8.71e-09!8;UBERON:0010009!8.71e-09!8;UBERON:0010011!8.71e-09!8;UBERON:0000454!8.71e-09!8;UBERON:0002298!1.27e-08!6;UBERON:0000477!9.76e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.62e-22,34;UBERON:0001017,9.22e-20,73;UBERON:0001016,3.57e-19,75;UBERON:0003528,1.25e-18,29;UBERON:0002791,1.25e-18,29;UBERON:0001893,1.25e-18,29;UBERON:0001954,8.47e-18,7;UBERON:0003022,8.47e-18,7;UBERON:0002421,8.47e-18,7;UBERON:0000349,8.47e-18,7;UBERON:0002600,8.47e-18,7;UBERON:0001049,1.84e-16,52;UBERON:0005068,1.84e-16,52;UBERON:0006241,1.84e-16,52;UBERON:0007135,1.84e-16,52;UBERON:0000073,8.89e-16,54;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0000956,6.12e-14,21;UBERON:0001869,6.12e-14,21;UBERON:0000203,6.12e-14,21;UBERON:0002616,1.54e-13,46;UBERON:0002619,1.73e-13,17;UBERON:0002780,1.86e-13,39;UBERON:0001890,1.86e-13,39;UBERON:0006240,1.86e-13,39;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0003080,4.41e-13,40;UBERON:0002346,5.44e-13,64;UBERON:0003075,5.44e-13,64;UBERON:0007284,5.44e-13,64;UBERON:0010371,3.94e-11,73;UBERON:0002256,4.91e-11,2;UBERON:0003056,2.18e-10,49;UBERON:0010314,2.17e-08,92;UBERON:0002038,3.46e-07,3;UBERON:0009663,3.46e-07,3;UBERON:0009661,3.46e-07,3;UBERON:0000125,3.46e-07,3;UBERON:0002308,3.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.59310688073965,9.22681967484782,7.77719596297134,3.3596741190087,5.75010257459886,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,6.2916023208865,16.5213871288268,0.414758449233911,0.810035629990144,0.210324961351382,5.99867067247988,2.87129103237098,1.46988959057945,2.01275489138296,3.67687514644008,0,0.510749352340751,0.307213066512487,0.131886287730194,0.823388792421687,0,0.837548997004143,1.12552522006336,2.13917546887534,0.294628585473668,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.299581278809645,2.28750301409313,0.879580464790051,1.39059456153821,0.255715457330331,0.83115217823824,0.162241263067758,0,0,0,0,0,0,0,0,0,0.512454881139399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,0.171853182343688,0,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0.818462086339379,0.309873682371932,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr15:88808353..88808379,- | |||
}} |
Revision as of 11:31, 13 September 2013
Short description: | p@chr15:88808353..88808379, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:88808353..88808379, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.24e-31 | 8 |
migratory neural crest cell | 7.50e-25 | 10 |
neuron associated cell | 7.50e-25 | 10 |
glial cell (sensu Vertebrata) | 7.50e-25 | 10 |
neuron associated cell (sensu Vertebrata) | 7.50e-25 | 10 |
glial cell | 7.50e-25 | 10 |
glioblast | 7.50e-25 | 10 |
glioblast (sensu Vertebrata) | 7.50e-25 | 10 |
oligodendrocyte | 1.62e-21 | 6 |
macroglial cell | 1.62e-21 | 6 |
astrocyte | 1.62e-21 | 6 |
neural cell | 6.63e-21 | 43 |
ectodermal cell | 2.20e-20 | 44 |
neurectodermal cell | 2.20e-20 | 44 |
hippocampal neuron | 4.00e-15 | 3 |
embryonic cell | 4.79e-12 | 70 |
central nervous system macrophage | 1.54e-11 | 2 |
microglial cell | 1.54e-11 | 2 |
astrocyte of the cerebral cortex | 1.73e-11 | 2 |
astrocyte of the hippocampus | 1.73e-11 | 2 |
neuron of the dorsal spinal cord | 4.91e-11 | 2 |
CNS neuron (sensu Vertebrata) | 1.12e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-09 | 23 |
neuron of cerebral cortex | 7.92e-08 | 6 |
neuron of the substantia nigra | 3.46e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.