FFCP PHASE1:Mm9::chr17:14813991..14813999,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=445|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:14813991..14813999,+|id=chr17:14813991..14813999,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,4.58e-44,3;CL:0000359,4.58e-44,3;CL:0002539,4.58e-44,3;CL:0000514,4.58e-44,3;CL:0000680,1.60e-22,6;CL:0000187,1.60e-22,6;CL:0000056,1.60e-22,6;CL:0000222,1.96e-19,7;CL:0000355,2.64e-15,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.58e-44,3;UBERON:0004237,4.58e-44,3;UBERON:0004695,4.58e-44,3;UBERON:0002111,4.58e-44,3;UBERON:0004178,4.58e-44,3;UBERON:0000947,2.62e-33,4;UBERON:0001637,2.62e-33,4;UBERON:0004573,2.62e-33,4;UBERON:0003509,2.62e-33,4;UBERON:0004571,2.62e-33,4;UBERON:0010191,2.62e-33,4;UBERON:0004572,2.62e-33,4;UBERON:0000055,7.67e-27,5;UBERON:0007500,7.67e-27,5;UBERON:0001981,7.67e-27,5;UBERON:0002049,7.67e-27,5;UBERON:0007798,7.67e-27,5;UBERON:0004537,7.67e-27,5;UBERON:0006965,7.67e-27,5;UBERON:0001134,2.64e-15,9;UBERON:0002036,2.64e-15,9;UBERON:0002385,2.64e-15,9;UBERON:0000486,2.64e-15,9;UBERON:0007503,2.64e-15,9;UBERON:0001015,2.64e-15,9;UBERON:0002329,2.64e-15,9;UBERON:0003082,2.64e-15,9;UBERON:0003059,2.64e-15,9;UBERON:0007282,2.64e-15,9;UBERON:0004290,2.64e-15,9;UBERON:0009618,2.64e-15,9;UBERON:0000383,7.43e-14,10;UBERON:0007524,1.14e-12,11;UBERON:0003077,1.14e-12,11;UBERON:0007285,1.14e-12,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,1.4192770370732,11.9305388905093,0,0,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0.377857800533928,0,0,0,0,0,0,0,0,0.519572009205738,0.70667914902068,0,0,0,7.11066703153331,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0.647067399789637,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.81471491080253,0.248813941220186,0,0,0,0,0,0.452114453507145,0.476255494059295,0.768682321709099,0.468508622798644,0.258703370739016,0,0,0,0.657587197282725,0.556094498451196,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0.393528463494808,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0,0.492502392237286,0.243206428637567,0.584799949701329,0,0.268412837520744,0,0,0,0,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0,0,0.491804836130026,0,0,0,0,0,0,0.566153061577665,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0.377210159511796,0.295301892880773,0.922305443831782,0,0,0,0,0,0,0,0,0.258717367565509,0,0,1.42695054081656,0.658196082408484,0,0,0,0,0,0,0.180938774784468,0.835606408021955,0.492422699235184,0,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.844780627453891,0.352071715937262,0,0.104859344425711,0,0,0,0.405450430580328,0.513554785824136,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.859484216193193,0.382576664137687,0.220591419119515,0|short_description=p@chr17:14813991..14813999,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=445 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:14813991..14813999,+ | |||
|id=chr17:14813991..14813999,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.58e-44,3;CL:0000359,4.58e-44,3;CL:0002539,4.58e-44,3;CL:0000514,4.58e-44,3;CL:0000680,1.60e-22,6;CL:0000187,1.60e-22,6;CL:0000056,1.60e-22,6;CL:0000222,1.96e-19,7;CL:0000355,2.64e-15,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.58e-44,3;UBERON:0004237,4.58e-44,3;UBERON:0004695,4.58e-44,3;UBERON:0002111,4.58e-44,3;UBERON:0004178,4.58e-44,3;UBERON:0000947,2.62e-33,4;UBERON:0001637,2.62e-33,4;UBERON:0004573,2.62e-33,4;UBERON:0003509,2.62e-33,4;UBERON:0004571,2.62e-33,4;UBERON:0010191,2.62e-33,4;UBERON:0004572,2.62e-33,4;UBERON:0000055,7.67e-27,5;UBERON:0007500,7.67e-27,5;UBERON:0001981,7.67e-27,5;UBERON:0002049,7.67e-27,5;UBERON:0007798,7.67e-27,5;UBERON:0004537,7.67e-27,5;UBERON:0006965,7.67e-27,5;UBERON:0001134,2.64e-15,9;UBERON:0002036,2.64e-15,9;UBERON:0002385,2.64e-15,9;UBERON:0000486,2.64e-15,9;UBERON:0007503,2.64e-15,9;UBERON:0001015,2.64e-15,9;UBERON:0002329,2.64e-15,9;UBERON:0003082,2.64e-15,9;UBERON:0003059,2.64e-15,9;UBERON:0007282,2.64e-15,9;UBERON:0004290,2.64e-15,9;UBERON:0009618,2.64e-15,9;UBERON:0000383,7.43e-14,10;UBERON:0007524,1.14e-12,11;UBERON:0003077,1.14e-12,11;UBERON:0007285,1.14e-12,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,1.4192770370732,11.9305388905093,0,0,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0.377857800533928,0,0,0,0,0,0,0,0,0.519572009205738,0.70667914902068,0,0,0,7.11066703153331,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0.647067399789637,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.81471491080253,0.248813941220186,0,0,0,0,0,0.452114453507145,0.476255494059295,0.768682321709099,0.468508622798644,0.258703370739016,0,0,0,0.657587197282725,0.556094498451196,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0.393528463494808,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0,0.492502392237286,0.243206428637567,0.584799949701329,0,0.268412837520744,0,0,0,0,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0,0,0.491804836130026,0,0,0,0,0,0,0.566153061577665,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0.377210159511796,0.295301892880773,0.922305443831782,0,0,0,0,0,0,0,0,0.258717367565509,0,0,1.42695054081656,0.658196082408484,0,0,0,0,0,0,0.180938774784468,0.835606408021955,0.492422699235184,0,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.844780627453891,0.352071715937262,0,0.104859344425711,0,0,0,0.405450430580328,0.513554785824136,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.859484216193193,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr17:14813991..14813999,+ | |||
}} |
Revision as of 13:34, 13 September 2013
Short description: | p@chr17:14813991..14813999, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:14813991..14813999, + |
Coexpression cluster: | MCL_coexpression_mm9:445 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.58e-44 | 3 |
vascular associated smooth muscle cell | 4.58e-44 | 3 |
aortic smooth muscle cell | 4.58e-44 | 3 |
smooth muscle myoblast | 4.58e-44 | 3 |
muscle precursor cell | 1.60e-22 | 6 |
muscle cell | 1.60e-22 | 6 |
myoblast | 1.60e-22 | 6 |
mesodermal cell | 1.96e-19 | 7 |
multi-potent skeletal muscle stem cell | 2.64e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 4.58e-44 | 3 |
blood vessel smooth muscle | 4.58e-44 | 3 |
arterial system smooth muscle | 4.58e-44 | 3 |
artery smooth muscle tissue | 4.58e-44 | 3 |
aorta smooth muscle tissue | 4.58e-44 | 3 |
aorta | 2.62e-33 | 4 |
artery | 2.62e-33 | 4 |
systemic artery | 2.62e-33 | 4 |
arterial blood vessel | 2.62e-33 | 4 |
systemic arterial system | 2.62e-33 | 4 |
aortic system | 2.62e-33 | 4 |
arterial system | 2.62e-33 | 4 |
vessel | 7.67e-27 | 5 |
epithelial tube open at both ends | 7.67e-27 | 5 |
blood vessel | 7.67e-27 | 5 |
vasculature | 7.67e-27 | 5 |
vascular system | 7.67e-27 | 5 |
blood vasculature | 7.67e-27 | 5 |
vascular cord | 7.67e-27 | 5 |
skeletal muscle tissue | 2.64e-15 | 9 |
striated muscle tissue | 2.64e-15 | 9 |
muscle tissue | 2.64e-15 | 9 |
multilaminar epithelium | 2.64e-15 | 9 |
epithelial vesicle | 2.64e-15 | 9 |
musculature | 2.64e-15 | 9 |
somite | 2.64e-15 | 9 |
myotome | 2.64e-15 | 9 |
presomitic mesoderm | 2.64e-15 | 9 |
presumptive segmental plate | 2.64e-15 | 9 |
dermomyotome | 2.64e-15 | 9 |
trunk paraxial mesoderm | 2.64e-15 | 9 |
musculature of body | 7.43e-14 | 10 |
dense mesenchyme tissue | 1.14e-12 | 11 |
paraxial mesoderm | 1.14e-12 | 11 |
presumptive paraxial mesoderm | 1.14e-12 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.