FFCP PHASE1:Mm9::chr17:17539829..17539874,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66643|HGNC=|UniProt=E9Q1B6,Q6P566|association_with_transcript=179bp_to_ENSMUST00000172213,NM_025681,uc008apg.1_5end|description=CAGE_peak_2_at_Lix1_5end|id=chr17:17539829..17539874,+|ontology_enrichment_celltype=CL:0002319!3.18e-12!43;CL:0000221!4.27e-12!44;CL:0000133!4.27e-12!44;CL:0000540!5.39e-10!33;CL:0000047!5.39e-10!33;CL:0000031!5.39e-10!33;CL:0000404!5.39e-10!33;CL:0000117!8.67e-09!23;CL:0000337!8.67e-09!23;CL:0000055!2.98e-08!50|ontology_enrichment_celltype_v019_2=CL:0002319,3.10e-13,43;CL:0000221,1.40e-12,44;CL:0000133,1.40e-12,44;CL:0000540,1.37e-10,33;CL:0000047,1.37e-10,33;CL:0000031,1.37e-10,33;CL:0000404,1.37e-10,33;CL:0000117,1.15e-09,23;CL:0000337,1.15e-09,23;CL:0000393,2.98e-07,39;CL:0000211,2.98e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.06e-30!71;UBERON:0003075!4.06e-30!71;UBERON:0007284!4.06e-30!71;UBERON:0004121!5.10e-30!102;UBERON:0000924!5.10e-30!102;UBERON:0006601!5.10e-30!102;UBERON:0003056!6.18e-27!49;UBERON:0000073!3.92e-26!75;UBERON:0001016!3.92e-26!75;UBERON:0001017!1.53e-25!73;UBERON:0005743!1.53e-25!73;UBERON:0000033!8.70e-25!63;UBERON:0001049!5.81e-21!52;UBERON:0005068!5.81e-21!52;UBERON:0006241!5.81e-21!52;UBERON:0007135!5.81e-21!52;UBERON:0003080!6.29e-21!40;UBERON:0000955!9.02e-21!50;UBERON:0006238!9.02e-21!50;UBERON:0002780!1.77e-20!39;UBERON:0001890!1.77e-20!39;UBERON:0006240!1.77e-20!39;UBERON:0002616!2.19e-20!49;UBERON:0002020!1.41e-17!34;UBERON:0002791!1.32e-16!29;UBERON:0003528!1.32e-16!29;UBERON:0001893!1.32e-16!29;UBERON:0000153!1.22e-14!94;UBERON:0000956!1.34e-13!21;UBERON:0001869!1.34e-13!21;UBERON:0000203!1.34e-13!21;UBERON:0007811!4.62e-12!86;UBERON:0002619!5.01e-11!17;UBERON:0000468!7.77e-08!333;UBERON:0002021!2.04e-07!10;UBERON:0000411!2.04e-07!10;UBERON:0001950!2.04e-07!10;UBERON:0000970!9.60e-07!9;UBERON:0000019!9.60e-07!9;UBERON:0000047!9.60e-07!9;UBERON:0004088!9.60e-07!9;UBERON:0002104!9.60e-07!9;UBERON:0001456!9.60e-07!9;UBERON:0003072!9.60e-07!9;UBERON:0003071!9.60e-07!9;UBERON:0004128!9.60e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.33e-29,49;UBERON:0002346,2.82e-29,64;UBERON:0003075,2.82e-29,64;UBERON:0007284,2.82e-29,64;UBERON:0004121,1.97e-27,95;UBERON:0000924,1.97e-27,95;UBERON:0006601,1.97e-27,95;UBERON:0001016,3.14e-27,75;UBERON:0001017,1.44e-26,73;UBERON:0010371,2.11e-23,73;UBERON:0000073,1.09e-22,54;UBERON:0003080,1.21e-22,40;UBERON:0002780,3.85e-22,39;UBERON:0001890,3.85e-22,39;UBERON:0006240,3.85e-22,39;UBERON:0001049,6.80e-22,52;UBERON:0005068,6.80e-22,52;UBERON:0006241,6.80e-22,52;UBERON:0007135,6.80e-22,52;UBERON:0000955,8.13e-21,47;UBERON:0006238,8.13e-21,47;UBERON:0002616,2.16e-20,46;UBERON:0002020,1.60e-19,34;UBERON:0003528,1.96e-18,29;UBERON:0002791,1.96e-18,29;UBERON:0001893,1.96e-18,29;UBERON:0010314,2.27e-18,92;UBERON:0000956,4.63e-15,21;UBERON:0001869,4.63e-15,21;UBERON:0000203,4.63e-15,21;UBERON:0002619,3.55e-12,17;UBERON:0002021,3.95e-08,10;UBERON:0000411,3.95e-08,10;UBERON:0001950,3.95e-08,10;UBERON:0000970,2.23e-07,9;UBERON:0000019,2.23e-07,9;UBERON:0000047,2.23e-07,9;UBERON:0010312,2.23e-07,9;UBERON:0004088,2.23e-07,9;UBERON:0002104,2.23e-07,9;UBERON:0001456,2.23e-07,9;UBERON:0003072,2.23e-07,9;UBERON:0004128,2.23e-07,9;UBERON:0003071,2.23e-07,9|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,17.0059621976748,8.78744730937887,4.86074747685709,5.87942970826523,12.9377307928474,0,0,0,0,0,0,4.04632921719196,2.11596391708813,1.90149421051854,0,0,0,0,0,2.09720077362883,3.45796474789399,18.9751990524514,16.7407363531296,14.5124223332454,2.57085885963423,2.42955395046775,12.6165523191403,15.4311208339361,8.27296907949019,2.20231761998777,7.2781782708557,3.68655679814984,6.59431438650969,6.77008562657831,5.73004707612436,5.58365998002762,9.00420176050688,8.55670187550137,4.12480019663135,4.12877874317399,6.33758115806022,1.59025005999687,12.0914496170857,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,1.48442139064825,8.15381035800839,9.74289530598852,4.84292544237723,9.94769427647309,8.46638691377075,1.50799909595611,0,0.433798070759735,0,0.323533699894818,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,7.78911324905078,13.7250180845588,3.26701315493447,18.7730265807659,20.7129520437568,7.48036960414416,8.4365456795234,3.7680564624617,0.373220911830279,0.758168275301024,4.62972082950243,19.6481868873683,13.7941262660084,17.1059023315082,10.3986324306643,16.6689422920753,22.8042422107033,16.7726086961915,21.4723797713383,39.4489427067101,14.5611681729221,8.2697028357056,12.2749610159442,10.0097009721215,6.268538997399,3.49829631893504,4.17971960318836,0,0,0,0.828503090142008,1.40715635988658,0.720248245844059,0.23674473558521,0.590292695242212,0.462801338662135,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,17.8746456279508,26.4464853814761,0,0.793351699990633,5.11891801284562,3.71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| ||
|EntrezGene=66643 | |||
|HGNC= | |||
|UniProt=E9Q1B6,Q6P566 | |||
|association_with_transcript=179bp_to_ENSMUST00000172213,NM_025681,uc008apg.1_5end | |||
|description=CAGE_peak_2_at_Lix1_5end | |||
|id=chr17:17539829..17539874,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.18e-12!43;CL:0000221!4.27e-12!44;CL:0000133!4.27e-12!44;CL:0000540!5.39e-10!33;CL:0000047!5.39e-10!33;CL:0000031!5.39e-10!33;CL:0000404!5.39e-10!33;CL:0000117!8.67e-09!23;CL:0000337!8.67e-09!23;CL:0000055!2.98e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.10e-13,43;CL:0000221,1.40e-12,44;CL:0000133,1.40e-12,44;CL:0000540,1.37e-10,33;CL:0000047,1.37e-10,33;CL:0000031,1.37e-10,33;CL:0000404,1.37e-10,33;CL:0000117,1.15e-09,23;CL:0000337,1.15e-09,23;CL:0000393,2.98e-07,39;CL:0000211,2.98e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.06e-30!71;UBERON:0003075!4.06e-30!71;UBERON:0007284!4.06e-30!71;UBERON:0004121!5.10e-30!102;UBERON:0000924!5.10e-30!102;UBERON:0006601!5.10e-30!102;UBERON:0003056!6.18e-27!49;UBERON:0000073!3.92e-26!75;UBERON:0001016!3.92e-26!75;UBERON:0001017!1.53e-25!73;UBERON:0005743!1.53e-25!73;UBERON:0000033!8.70e-25!63;UBERON:0001049!5.81e-21!52;UBERON:0005068!5.81e-21!52;UBERON:0006241!5.81e-21!52;UBERON:0007135!5.81e-21!52;UBERON:0003080!6.29e-21!40;UBERON:0000955!9.02e-21!50;UBERON:0006238!9.02e-21!50;UBERON:0002780!1.77e-20!39;UBERON:0001890!1.77e-20!39;UBERON:0006240!1.77e-20!39;UBERON:0002616!2.19e-20!49;UBERON:0002020!1.41e-17!34;UBERON:0002791!1.32e-16!29;UBERON:0003528!1.32e-16!29;UBERON:0001893!1.32e-16!29;UBERON:0000153!1.22e-14!94;UBERON:0000956!1.34e-13!21;UBERON:0001869!1.34e-13!21;UBERON:0000203!1.34e-13!21;UBERON:0007811!4.62e-12!86;UBERON:0002619!5.01e-11!17;UBERON:0000468!7.77e-08!333;UBERON:0002021!2.04e-07!10;UBERON:0000411!2.04e-07!10;UBERON:0001950!2.04e-07!10;UBERON:0000970!9.60e-07!9;UBERON:0000019!9.60e-07!9;UBERON:0000047!9.60e-07!9;UBERON:0004088!9.60e-07!9;UBERON:0002104!9.60e-07!9;UBERON:0001456!9.60e-07!9;UBERON:0003072!9.60e-07!9;UBERON:0003071!9.60e-07!9;UBERON:0004128!9.60e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.33e-29,49;UBERON:0002346,2.82e-29,64;UBERON:0003075,2.82e-29,64;UBERON:0007284,2.82e-29,64;UBERON:0004121,1.97e-27,95;UBERON:0000924,1.97e-27,95;UBERON:0006601,1.97e-27,95;UBERON:0001016,3.14e-27,75;UBERON:0001017,1.44e-26,73;UBERON:0010371,2.11e-23,73;UBERON:0000073,1.09e-22,54;UBERON:0003080,1.21e-22,40;UBERON:0002780,3.85e-22,39;UBERON:0001890,3.85e-22,39;UBERON:0006240,3.85e-22,39;UBERON:0001049,6.80e-22,52;UBERON:0005068,6.80e-22,52;UBERON:0006241,6.80e-22,52;UBERON:0007135,6.80e-22,52;UBERON:0000955,8.13e-21,47;UBERON:0006238,8.13e-21,47;UBERON:0002616,2.16e-20,46;UBERON:0002020,1.60e-19,34;UBERON:0003528,1.96e-18,29;UBERON:0002791,1.96e-18,29;UBERON:0001893,1.96e-18,29;UBERON:0010314,2.27e-18,92;UBERON:0000956,4.63e-15,21;UBERON:0001869,4.63e-15,21;UBERON:0000203,4.63e-15,21;UBERON:0002619,3.55e-12,17;UBERON:0002021,3.95e-08,10;UBERON:0000411,3.95e-08,10;UBERON:0001950,3.95e-08,10;UBERON:0000970,2.23e-07,9;UBERON:0000019,2.23e-07,9;UBERON:0000047,2.23e-07,9;UBERON:0010312,2.23e-07,9;UBERON:0004088,2.23e-07,9;UBERON:0002104,2.23e-07,9;UBERON:0001456,2.23e-07,9;UBERON:0003072,2.23e-07,9;UBERON:0004128,2.23e-07,9;UBERON:0003071,2.23e-07,9 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,17.0059621976748,8.78744730937887,4.86074747685709,5.87942970826523,12.9377307928474,0,0,0,0,0,0,4.04632921719196,2.11596391708813,1.90149421051854,0,0,0,0,0,2.09720077362883,3.45796474789399,18.9751990524514,16.7407363531296,14.5124223332454,2.57085885963423,2.42955395046775,12.6165523191403,15.4311208339361,8.27296907949019,2.20231761998777,7.2781782708557,3.68655679814984,6.59431438650969,6.77008562657831,5.73004707612436,5.58365998002762,9.00420176050688,8.55670187550137,4.12480019663135,4.12877874317399,6.33758115806022,1.59025005999687,12.0914496170857,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,1.48442139064825,8.15381035800839,9.74289530598852,4.84292544237723,9.94769427647309,8.46638691377075,1.50799909595611,0,0.433798070759735,0,0.323533699894818,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,7.78911324905078,13.7250180845588,3.26701315493447,18.7730265807659,20.7129520437568,7.48036960414416,8.4365456795234,3.7680564624617,0.373220911830279,0.758168275301024,4.62972082950243,19.6481868873683,13.7941262660084,17.1059023315082,10.3986324306643,16.6689422920753,22.8042422107033,16.7726086961915,21.4723797713383,39.4489427067101,14.5611681729221,8.2697028357056,12.2749610159442,10.0097009721215,6.268538997399,3.49829631893504,4.17971960318836,0,0,0,0.828503090142008,1.40715635988658,0.720248245844059,0.23674473558521,0.590292695242212,0.462801338662135,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,17.8746456279508,26.4464853814761,0,0.793351699990633,5.11891801284562,3.71578674976702,4.12375876230699,2.62188582010345,1.77902435075896,1.71203063501303,0.949058123089023,3.78807595865225,1.50801125280162,2.58643413653496,1.9496408711912,0,0,0.995706366271836,3.79335801906163,3.99869794134051,6.76246414038483,2.03651327845314,1.93952487167626,1.47285221769669,2.71917109634306,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,1.32643988239339,0.162964976442026,0.169745085775188,0.704070744865506,0.335012514883631,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,2.0871576698413,1.87538698547525,0,0,4.41711507182759,4.68526493155966,1.50796378412959,1.67278158566786,2.22798674082394,1.69845918473299,2.83367491172426,9.35218745316198,5.92931666919785,5.14114106274891,0.283880170416537,1.24645922567079,1.14020871547503,0,0,1.21390318077491,0.604647113929502,0,0,0.307435147943927,1.29214146584111,1.09060118843252,0.356497378384721,0.632073515871632,0,0,0.680879211507576,12.9643987702543,12.6771510107099,8.78781843629528,8.6896714484714,7.66985915688903,12.9993726275676,3.95804433848979,0.23467170806371,0,1.32317038832977,0,1.13025098687134,1.38719727334758,0.358117032009409,0.820704498725306,0.874442509889552,2.22510362412612,0,0.82554747185289,1.48155621895769,0,0,0.228778173206523,0,0,0,0,8.69923982348122,3.65975040828328,2.91614420218863,3.3454127362315,3.27543845619266,1.61837215661785,2.31429676030941,0.785267825952089,0.259229946583586,0,0,4.03694674318743,2.15096037594227,0.194451188344048,1.16243841129958,0.337912250981556,0.234714477291508,1.3020438484395,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,1.54551675225752,0,0,0,0,15.2482997506608,9.66682996665071,9.73922372846974,15.8104927756193,19.8673930733486,19.6402413321322,20.2506750069542,19.3638117386415,11.7817026335893,16.0505696643064,33.7308879648574,27.1336913912701,14.3416228833473,5.59145449257076,4.82110274044359,3.49302666055027,3.33370091702423,2.06035057238894,2.24643446714271,0.758091635291392,4.05566879824384,1.69763707247469,3.37109426891577,2.68905640100451,2.92920891673628,0.952587382566147,2.20180219295225,3.47236596834669,1.64834360321323,2.50238164228475,2.74295401908332,4.08194354166476,2.62279808942053,2.76158191601424,2.25862512996793,2.11536519729191,3.10977553883713,1.57841826862706,3.66671107383827,3.36685362994643,2.01679530811096,2.56111654176465,3.27384834535751,2.63392630016142,1.92906610981141,4.74640098082097,2.10538447600868,1.28922632428979,2.10417165275728,1.98532277207564,0.927471342481686 | |||
|short_description=p2@Lix1 | |||
}} |
Revision as of 13:36, 13 September 2013
Short description: | p2@Lix1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lix1_5end |
Coexpression cluster: | NA |
Association with transcript: | 179bp_to_ENSMUST00000172213, NM_025681, uc008apg.1_5end |
EntrezGene: | Lix1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.10e-13 | 43 |
ectodermal cell | 1.40e-12 | 44 |
neurectodermal cell | 1.40e-12 | 44 |
neuron | 1.37e-10 | 33 |
neuronal stem cell | 1.37e-10 | 33 |
neuroblast | 1.37e-10 | 33 |
electrically signaling cell | 1.37e-10 | 33 |
CNS neuron (sensu Vertebrata) | 1.15e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-09 | 23 |
electrically responsive cell | 2.98e-07 | 39 |
electrically active cell | 2.98e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.