FFCP PHASE1:Mm9::chr17:7958204..7958221,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2856|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:7958204..7958221,-|id=chr17:7958204..7958221,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,4.88e-07,3;CL:0000737,4.88e-07,3;CL:0000746,4.88e-07,3;CL:0000513,4.88e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000981,4.69e-11,4;UBERON:0003608,4.69e-11,4;UBERON:0003826,4.69e-11,4;UBERON:0008202,4.69e-11,4;UBERON:0004381,4.69e-11,4;UBERON:0007273,4.69e-11,4;UBERON:0010912,4.69e-11,4;UBERON:0002513,4.69e-11,4;UBERON:0004375,4.69e-11,4;UBERON:0010740,4.69e-11,4;UBERON:0010363,4.69e-11,4;UBERON:0003860,4.69e-11,4;UBERON:0002428,4.69e-11,4;UBERON:0010742,4.69e-11,4;UBERON:0002495,4.69e-11,4;UBERON:0003464,4.69e-11,4;UBERON:0003606,4.69e-11,4;UBERON:0005893,4.69e-11,4;UBERON:0009749,4.69e-11,4;UBERON:0010712,4.69e-11,4;UBERON:0010886,4.69e-11,4;UBERON:0005254,4.69e-11,4;UBERON:0010885,4.69e-11,4;UBERON:0010881,4.69e-11,4;UBERON:0010882,4.69e-11,4;UBERON:0007844,4.69e-11,4;UBERON:0001441,4.69e-11,4;UBERON:0011249,4.69e-11,4;UBERON:0002091,4.69e-11,4;UBERON:0003285,4.69e-11,4;UBERON:0004288,4.69e-11,4;UBERON:0010129,4.69e-11,4;UBERON:0006234,4.69e-11,4;UBERON:0000026,1.26e-09,12;UBERON:0004708,1.26e-09,12;UBERON:0002101,1.26e-09,12;UBERON:0004357,1.26e-09,12;UBERON:0004347,1.26e-09,12;UBERON:0005732,1.26e-09,12;UBERON:0005733,1.26e-09,12;UBERON:0003102,1.71e-09,22;UBERON:0005418,6.14e-09,5;UBERON:0002472,6.14e-09,5;UBERON:0008784,6.14e-09,5;UBERON:0006058,6.14e-09,5;UBERON:0004709,6.14e-09,5;UBERON:0002529,6.14e-09,5;UBERON:0010538,6.14e-09,5;UBERON:0005420,6.14e-09,5;UBERON:0010758,6.14e-09,5;UBERON:0000978,6.14e-09,5;UBERON:0002103,6.14e-09,5;UBERON:0000376,6.14e-09,5;UBERON:0000154,6.14e-09,5;UBERON:0010709,6.14e-09,5;UBERON:0005730,6.14e-09,5;UBERON:0010707,7.23e-09,13;UBERON:0000075,1.60e-07,6;UBERON:0005856,1.60e-07,6;UBERON:0005866,1.60e-07,6;UBERON:0005863,1.60e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,2.05807548828758,1.43266719969378,0,0,0.528990979272033,0,0,0,0,0,0,0,1.53687322128622,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.433798070759735,0,2.58826959915855,1.54589062922275,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.509196819251581,0.124406970610093,0,0,0,0,0.180062129805349,0.30140963567143,0.884474488967262,1.0249097622788,0.468508622798644,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0,1.74126083261083,1.64625709126355,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0.697601834251224,0.536546802799238,0.583826711835847,0.987359099480883,0.820837320395476,0.162137619091711,0.292399974850665,0.658650345873152,0.268412837520744,0.210289948564127,0.205809224758569,0,0,0,0,0,0.605050573870028,0.444756087689741,0.190225626112559,0,0.164698954724011,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0,0,0,0,0,0,0,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0.651859905768103,0.169745085775188,0.704070744865506,0.335012514883631,0.714130922658041,0.975668239288994,1.41871629695572,1.32878813789265,2.23236676120482,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0.238968797952552,0,0,0,0,0,0,0.425820255624806,0.712262414669021,0.651547837414304,0.329940245945071,0,0,0,0.377210159511796,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0.65954501176592,1.61464426695906,1.02531972377865,0.596861720015682,0.820704498725306,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,1.04544148007234,0.655087691238533,0.404593039154462,0.495920734352016,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0.39061315453185,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.15241361331,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0,0,0.206035057238894,0,0.758091635291392,0,0,0.561849044819294,0.320125762024346,0.229741875822453,0,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.376437521661322,0.592302255241736,0.365855945745545,1.05227884575137,0.543216455383447,1.68342681497322,0,1.0835493061312,0,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,1.53030665655075,0.882365676478062,0.463735671240843|short_description=p@chr17:7958204..7958221,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2856 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:7958204..7958221,- | |||
|id=chr17:7958204..7958221,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,4.88e-07,3;CL:0000737,4.88e-07,3;CL:0000746,4.88e-07,3;CL:0000513,4.88e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000981,4.69e-11,4;UBERON:0003608,4.69e-11,4;UBERON:0003826,4.69e-11,4;UBERON:0008202,4.69e-11,4;UBERON:0004381,4.69e-11,4;UBERON:0007273,4.69e-11,4;UBERON:0010912,4.69e-11,4;UBERON:0002513,4.69e-11,4;UBERON:0004375,4.69e-11,4;UBERON:0010740,4.69e-11,4;UBERON:0010363,4.69e-11,4;UBERON:0003860,4.69e-11,4;UBERON:0002428,4.69e-11,4;UBERON:0010742,4.69e-11,4;UBERON:0002495,4.69e-11,4;UBERON:0003464,4.69e-11,4;UBERON:0003606,4.69e-11,4;UBERON:0005893,4.69e-11,4;UBERON:0009749,4.69e-11,4;UBERON:0010712,4.69e-11,4;UBERON:0010886,4.69e-11,4;UBERON:0005254,4.69e-11,4;UBERON:0010885,4.69e-11,4;UBERON:0010881,4.69e-11,4;UBERON:0010882,4.69e-11,4;UBERON:0007844,4.69e-11,4;UBERON:0001441,4.69e-11,4;UBERON:0011249,4.69e-11,4;UBERON:0002091,4.69e-11,4;UBERON:0003285,4.69e-11,4;UBERON:0004288,4.69e-11,4;UBERON:0010129,4.69e-11,4;UBERON:0006234,4.69e-11,4;UBERON:0000026,1.26e-09,12;UBERON:0004708,1.26e-09,12;UBERON:0002101,1.26e-09,12;UBERON:0004357,1.26e-09,12;UBERON:0004347,1.26e-09,12;UBERON:0005732,1.26e-09,12;UBERON:0005733,1.26e-09,12;UBERON:0003102,1.71e-09,22;UBERON:0005418,6.14e-09,5;UBERON:0002472,6.14e-09,5;UBERON:0008784,6.14e-09,5;UBERON:0006058,6.14e-09,5;UBERON:0004709,6.14e-09,5;UBERON:0002529,6.14e-09,5;UBERON:0010538,6.14e-09,5;UBERON:0005420,6.14e-09,5;UBERON:0010758,6.14e-09,5;UBERON:0000978,6.14e-09,5;UBERON:0002103,6.14e-09,5;UBERON:0000376,6.14e-09,5;UBERON:0000154,6.14e-09,5;UBERON:0010709,6.14e-09,5;UBERON:0005730,6.14e-09,5;UBERON:0010707,7.23e-09,13;UBERON:0000075,1.60e-07,6;UBERON:0005856,1.60e-07,6;UBERON:0005866,1.60e-07,6;UBERON:0005863,1.60e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,2.05807548828758,1.43266719969378,0,0,0.528990979272033,0,0,0,0,0,0,0,1.53687322128622,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.433798070759735,0,2.58826959915855,1.54589062922275,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.509196819251581,0.124406970610093,0,0,0,0,0.180062129805349,0.30140963567143,0.884474488967262,1.0249097622788,0.468508622798644,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0,1.74126083261083,1.64625709126355,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0.697601834251224,0.536546802799238,0.583826711835847,0.987359099480883,0.820837320395476,0.162137619091711,0.292399974850665,0.658650345873152,0.268412837520744,0.210289948564127,0.205809224758569,0,0,0,0,0,0.605050573870028,0.444756087689741,0.190225626112559,0,0.164698954724011,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0,0,0,0,0,0,0,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0.651859905768103,0.169745085775188,0.704070744865506,0.335012514883631,0.714130922658041,0.975668239288994,1.41871629695572,1.32878813789265,2.23236676120482,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0.238968797952552,0,0,0,0,0,0,0.425820255624806,0.712262414669021,0.651547837414304,0.329940245945071,0,0,0,0.377210159511796,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0.65954501176592,1.61464426695906,1.02531972377865,0.596861720015682,0.820704498725306,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,1.04544148007234,0.655087691238533,0.404593039154462,0.495920734352016,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0.39061315453185,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.15241361331,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0,0,0.206035057238894,0,0.758091635291392,0,0,0.561849044819294,0.320125762024346,0.229741875822453,0,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.376437521661322,0.592302255241736,0.365855945745545,1.05227884575137,0.543216455383447,1.68342681497322,0,1.0835493061312,0,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,1.53030665655075,0.882365676478062,0.463735671240843 | |||
|short_description=p@chr17:7958204..7958221,- | |||
}} |
Revision as of 15:21, 13 September 2013
Short description: | p@chr17:7958204..7958221, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:7958204..7958221, - |
Coexpression cluster: | MCL_coexpression_mm9:2856 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 4.88e-07 | 3 |
striated muscle cell | 4.88e-07 | 3 |
cardiac muscle cell | 4.88e-07 | 3 |
cardiac muscle myoblast | 4.88e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.