FFCP PHASE1:Mm9::chr18:61265270..61265289,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=12978|HGNC=|MCL_coexpression_id=31|UniProt=P09581,Q0P635,Q3UKC6,Q6NXV8|association_with_transcript=44bp_to_ENSMUST00000025523,NM_001037859,uc008fbn.1_5end|description=CAGE_peak_4_at_Csf1r_5end|id=chr18:61265270..61265289,+|ontology_enrichment_celltype=CL:0000349!2.13e-07!3;CL:0000351!2.13e-07!3|ontology_enrichment_celltype_v019_2=CL:0000349,8.33e-20,3;CL:0000351,8.33e-20,3;CL:0002476,4.00e-13,2;CL:0002194,5.23e-07,4;CL:0000766,5.23e-07,4;CL:0000234,5.23e-07,4;CL:0000576,5.23e-07,4;CL:0000235,5.23e-07,4;CL:0000864,5.23e-07,4;CL:0002009,5.23e-07,4;CL:0000040,5.23e-07,4;CL:0000559,5.23e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.15e-07!3;UBERON:0000478!1.15e-07!3;UBERON:0000158!1.15e-07!3;UBERON:0000358!2.13e-07!3;UBERON:0000307!2.13e-07!3;UBERON:0005418!4.25e-07!5;UBERON:0002472!4.25e-07!5;UBERON:0008784!4.25e-07!5;UBERON:0006058!4.25e-07!5;UBERON:0004709!4.25e-07!5;UBERON:0005420!4.25e-07!5;UBERON:0006057!4.25e-07!5;UBERON:0000978!4.25e-07!5;UBERON:0002103!4.25e-07!5;UBERON:0000376!4.25e-07!5;UBERON:0000154!4.25e-07!5;UBERON:0005730!4.25e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.22e-20,3;UBERON:0000478,1.22e-20,3;UBERON:0000158,1.22e-20,3;UBERON:0000358,8.33e-20,3;UBERON:0000307,8.33e-20,3;UBERON:0007010,8.33e-20,3;UBERON:0005795,1.37e-15,4;UBERON:0000995,1.37e-15,4;UBERON:0000981,1.35e-14,4;UBERON:0003608,1.35e-14,4;UBERON:0003826,1.35e-14,4;UBERON:0008202,1.35e-14,4;UBERON:0004381,1.35e-14,4;UBERON:0007273,1.35e-14,4;UBERON:0010912,1.35e-14,4;UBERON:0002513,1.35e-14,4;UBERON:0004375,1.35e-14,4;UBERON:0010740,1.35e-14,4;UBERON:0010363,1.35e-14,4;UBERON:0003860,1.35e-14,4;UBERON:0002428,1.35e-14,4;UBERON:0010742,1.35e-14,4;UBERON:0002495,1.35e-14,4;UBERON:0003464,1.35e-14,4;UBERON:0003606,1.35e-14,4;UBERON:0005893,1.35e-14,4;UBERON:0009749,1.35e-14,4;UBERON:0010712,1.35e-14,4;UBERON:0010886,1.35e-14,4;UBERON:0005254,1.35e-14,4;UBERON:0010885,1.35e-14,4;UBERON:0010881,1.35e-14,4;UBERON:0010882,1.35e-14,4;UBERON:0007844,1.35e-14,4;UBERON:0001441,1.35e-14,4;UBERON:0011249,1.35e-14,4;UBERON:0002091,1.35e-14,4;UBERON:0003285,1.35e-14,4;UBERON:0004288,1.35e-14,4;UBERON:0010129,1.35e-14,4;UBERON:0006234,1.35e-14,4;UBERON:0001987,2.15e-14,2;UBERON:0003124,2.15e-14,2;UBERON:0004340,2.15e-14,2;UBERON:0003975,1.37e-12,5;UBERON:0004175,7.72e-12,9;UBERON:0005418,8.48e-12,5;UBERON:0002472,8.48e-12,5;UBERON:0008784,8.48e-12,5;UBERON:0006058,8.48e-12,5;UBERON:0004709,8.48e-12,5;UBERON:0002529,8.48e-12,5;UBERON:0010538,8.48e-12,5;UBERON:0005420,8.48e-12,5;UBERON:0010758,8.48e-12,5;UBERON:0000978,8.48e-12,5;UBERON:0002103,8.48e-12,5;UBERON:0000376,8.48e-12,5;UBERON:0000154,8.48e-12,5;UBERON:0010709,8.48e-12,5;UBERON:0005730,8.48e-12,5;UBERON:0000075,6.30e-10,6;UBERON:0005856,6.30e-10,6;UBERON:0005866,6.30e-10,6;UBERON:0005863,6.30e-10,6;UBERON:0004871,2.17e-09,3;UBERON:0003134,4.61e-08,8;UBERON:0000305,6.29e-08,1;UBERON:0006834,7.32e-08,1;UBERON:0000474,3.22e-07,9;UBERON:0001474,5.67e-07,22;UBERON:0004765,5.67e-07,22;UBERON:0001434,5.67e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0564527736718,0,0,1.29413479957927,2.20841518460394,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24406970610093,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5073220482823,71.811072022835,0,0,0,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,1.77588762699252,4.12683740403588,5.37230772365051,0,6.75656911624255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.468207537349412,0.192075457214608,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0,0.470546902076653,0.169229215783353,0,0,0.407412341537585,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.999242311751784,0,0,1.14772999241306,0.882365676478062,0.231867835620421|short_description=p4@Csf1r}} | ||
|EntrezGene=12978 | |||
|HGNC= | |||
|MCL_coexpression_id=31 | |||
|UniProt=P09581,Q0P635,Q3UKC6,Q6NXV8 | |||
|association_with_transcript=44bp_to_ENSMUST00000025523,NM_001037859,uc008fbn.1_5end | |||
|description=CAGE_peak_4_at_Csf1r_5end | |||
|id=chr18:61265270..61265289,+ | |||
|ontology_enrichment_celltype=CL:0000349!2.13e-07!3;CL:0000351!2.13e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.33e-20,3;CL:0000351,8.33e-20,3;CL:0002476,4.00e-13,2;CL:0002194,5.23e-07,4;CL:0000766,5.23e-07,4;CL:0000234,5.23e-07,4;CL:0000576,5.23e-07,4;CL:0000235,5.23e-07,4;CL:0000864,5.23e-07,4;CL:0002009,5.23e-07,4;CL:0000040,5.23e-07,4;CL:0000559,5.23e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.15e-07!3;UBERON:0000478!1.15e-07!3;UBERON:0000158!1.15e-07!3;UBERON:0000358!2.13e-07!3;UBERON:0000307!2.13e-07!3;UBERON:0005418!4.25e-07!5;UBERON:0002472!4.25e-07!5;UBERON:0008784!4.25e-07!5;UBERON:0006058!4.25e-07!5;UBERON:0004709!4.25e-07!5;UBERON:0005420!4.25e-07!5;UBERON:0006057!4.25e-07!5;UBERON:0000978!4.25e-07!5;UBERON:0002103!4.25e-07!5;UBERON:0000376!4.25e-07!5;UBERON:0000154!4.25e-07!5;UBERON:0005730!4.25e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.22e-20,3;UBERON:0000478,1.22e-20,3;UBERON:0000158,1.22e-20,3;UBERON:0000358,8.33e-20,3;UBERON:0000307,8.33e-20,3;UBERON:0007010,8.33e-20,3;UBERON:0005795,1.37e-15,4;UBERON:0000995,1.37e-15,4;UBERON:0000981,1.35e-14,4;UBERON:0003608,1.35e-14,4;UBERON:0003826,1.35e-14,4;UBERON:0008202,1.35e-14,4;UBERON:0004381,1.35e-14,4;UBERON:0007273,1.35e-14,4;UBERON:0010912,1.35e-14,4;UBERON:0002513,1.35e-14,4;UBERON:0004375,1.35e-14,4;UBERON:0010740,1.35e-14,4;UBERON:0010363,1.35e-14,4;UBERON:0003860,1.35e-14,4;UBERON:0002428,1.35e-14,4;UBERON:0010742,1.35e-14,4;UBERON:0002495,1.35e-14,4;UBERON:0003464,1.35e-14,4;UBERON:0003606,1.35e-14,4;UBERON:0005893,1.35e-14,4;UBERON:0009749,1.35e-14,4;UBERON:0010712,1.35e-14,4;UBERON:0010886,1.35e-14,4;UBERON:0005254,1.35e-14,4;UBERON:0010885,1.35e-14,4;UBERON:0010881,1.35e-14,4;UBERON:0010882,1.35e-14,4;UBERON:0007844,1.35e-14,4;UBERON:0001441,1.35e-14,4;UBERON:0011249,1.35e-14,4;UBERON:0002091,1.35e-14,4;UBERON:0003285,1.35e-14,4;UBERON:0004288,1.35e-14,4;UBERON:0010129,1.35e-14,4;UBERON:0006234,1.35e-14,4;UBERON:0001987,2.15e-14,2;UBERON:0003124,2.15e-14,2;UBERON:0004340,2.15e-14,2;UBERON:0003975,1.37e-12,5;UBERON:0004175,7.72e-12,9;UBERON:0005418,8.48e-12,5;UBERON:0002472,8.48e-12,5;UBERON:0008784,8.48e-12,5;UBERON:0006058,8.48e-12,5;UBERON:0004709,8.48e-12,5;UBERON:0002529,8.48e-12,5;UBERON:0010538,8.48e-12,5;UBERON:0005420,8.48e-12,5;UBERON:0010758,8.48e-12,5;UBERON:0000978,8.48e-12,5;UBERON:0002103,8.48e-12,5;UBERON:0000376,8.48e-12,5;UBERON:0000154,8.48e-12,5;UBERON:0010709,8.48e-12,5;UBERON:0005730,8.48e-12,5;UBERON:0000075,6.30e-10,6;UBERON:0005856,6.30e-10,6;UBERON:0005866,6.30e-10,6;UBERON:0005863,6.30e-10,6;UBERON:0004871,2.17e-09,3;UBERON:0003134,4.61e-08,8;UBERON:0000305,6.29e-08,1;UBERON:0006834,7.32e-08,1;UBERON:0000474,3.22e-07,9;UBERON:0001474,5.67e-07,22;UBERON:0004765,5.67e-07,22;UBERON:0001434,5.67e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0564527736718,0,0,1.29413479957927,2.20841518460394,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24406970610093,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5073220482823,71.811072022835,0,0,0,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,1.77588762699252,4.12683740403588,5.37230772365051,0,6.75656911624255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.468207537349412,0.192075457214608,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0,0.470546902076653,0.169229215783353,0,0,0.407412341537585,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.999242311751784,0,0,1.14772999241306,0.882365676478062,0.231867835620421 | |||
|short_description=p4@Csf1r | |||
}} |
Revision as of 16:29, 13 September 2013
Short description: | p4@Csf1r |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Csf1r_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | 44bp_to_ENSMUST00000025523, NM_001037859, uc008fbn.1_5end |
EntrezGene: | Csf1r |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.33e-20 | 3 |
trophoblast cell | 8.33e-20 | 3 |
bone marrow macrophage | 4.00e-13 | 2 |
monopoietic cell | 5.23e-07 | 4 |
myeloid leukocyte | 5.23e-07 | 4 |
phagocyte | 5.23e-07 | 4 |
monocyte | 5.23e-07 | 4 |
macrophage | 5.23e-07 | 4 |
tissue-resident macrophage | 5.23e-07 | 4 |
macrophage dendritic cell progenitor | 5.23e-07 | 4 |
monoblast | 5.23e-07 | 4 |
promonocyte | 5.23e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.